| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159897262
Identifier: 159897262
GI number: 159897262
Start: 842287
End: 843306
Strand: Reverse
Name: 159897262
Synonym: Haur_0733
Alternate gene names: NA
Gene position: 843306-842287 (Counterclockwise)
Preceding gene: 159897263
Following gene: 159897245
Centisome position: 13.29
GC content: 51.27
Gene sequence:
>1020_bases GTGTTACACGAACAGCAAACCCCAGTAACCCCGCTAGTTATCAATGGCCCATGGACGCGCGAAGCTCGCGAACGCGCAAT CGCCGAAGAAGTAAAATTAGCCTATATCGAATATTTTCGCAAAGCCGTCAAAACCCGCAATTGGTTACCATGGGATGATT TGCCACTGCGCGAGATGGAACAATATGGTCACATGCTCAGCGAAGATACCGTGACCTTGGTTGAAAGTTTCTTGGGCGTT GAAGATTATGTCGGCGATTATGTCGAGGATACCATCAACATCGTCCATGGCAAGCGCGAACGGCGTAATATTCAATTGCA ATGGGGCGCTGAAGAATCCAAGCACGCCGAGGCTTGGGAATTGGTACTGTTACACTCAGGCCGCCGCACCAAAGAGCAAC TAGAAACCTATCGCGATCAAGTTGCCGAGCATCGCTGGACGATGTATGAAAATCATCCTGGCTTTGACACGCCCTTGGGG GTCGCGGCCTATGCGATGGTCCAAGAACGCGCTACCTATTTTAATTATGAAGAACTGCGCAAACGGATTCGCAGCGAATA TGGCTTGCCCGAACAAACCACCGAAGAAGAGCGCAAACGTGGCAAGCAAATTGGCGCAGCTGCCGCCTTCAAAATCGTTG GGGTTGATGAGATTGCCCACCACGGTATGTTTCTGCGAGTGATCGATATTTACAAGCGCTATTTGCCGTATGAAACGCTG GATATGGTGTTTCGCGTGCTGAATGGCTTCAACATGCCAGCGCTGCATATTTTGCCCAATGCCGAGGAACTGAAAGCCTC ATTGGAACGCACCAAACTCTACACGCCACTCAAACATGGTCGGTTTGTCGCCAATCCAGTGCTCGATGCCATGGGCTTCA ACAATAAACGCGCCCTCGAACGAGCCGTTCAACAAGCCAAACTGCTGCCAACTGGCCTTGGCCCTGAACACGTCGCAATT GGCCGCGATGGCGAATTTGTGATTTCGATGCAGCCCGACGCTGAAATTGAAGCCGCCTAA
Upstream 100 bases:
>100_bases GGACAGGAACCCGACTACAACGGACGTATTAAGCCGCTAACATGGCTGCCCCGTCTCGGCGGGGTTTCTTTAGTGTGCCT AAAATTCAAGGAGTGGCTCT
Downstream 100 bases:
>100_bases TCATTGCGATTAAACGCTAGAGCGCAGGCAGTAATGATTGCCTGCGCTTGCTATTTAACCCAGCGCTCATCGCGCAACAA GAACGAAGAAGGACGTTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MLHEQQTPVTPLVINGPWTREARERAIAEEVKLAYIEYFRKAVKTRNWLPWDDLPLREMEQYGHMLSEDTVTLVESFLGV EDYVGDYVEDTINIVHGKRERRNIQLQWGAEESKHAEAWELVLLHSGRRTKEQLETYRDQVAEHRWTMYENHPGFDTPLG VAAYAMVQERATYFNYEELRKRIRSEYGLPEQTTEEERKRGKQIGAAAAFKIVGVDEIAHHGMFLRVIDIYKRYLPYETL DMVFRVLNGFNMPALHILPNAEELKASLERTKLYTPLKHGRFVANPVLDAMGFNNKRALERAVQQAKLLPTGLGPEHVAI GRDGEFVISMQPDAEIEAA
Sequences:
>Translated_339_residues MLHEQQTPVTPLVINGPWTREARERAIAEEVKLAYIEYFRKAVKTRNWLPWDDLPLREMEQYGHMLSEDTVTLVESFLGV EDYVGDYVEDTINIVHGKRERRNIQLQWGAEESKHAEAWELVLLHSGRRTKEQLETYRDQVAEHRWTMYENHPGFDTPLG VAAYAMVQERATYFNYEELRKRIRSEYGLPEQTTEEERKRGKQIGAAAAFKIVGVDEIAHHGMFLRVIDIYKRYLPYETL DMVFRVLNGFNMPALHILPNAEELKASLERTKLYTPLKHGRFVANPVLDAMGFNNKRALERAVQQAKLLPTGLGPEHVAI GRDGEFVISMQPDAEIEAA >Mature_339_residues MLHEQQTPVTPLVINGPWTREARERAIAEEVKLAYIEYFRKAVKTRNWLPWDDLPLREMEQYGHMLSEDTVTLVESFLGV EDYVGDYVEDTINIVHGKRERRNIQLQWGAEESKHAEAWELVLLHSGRRTKEQLETYRDQVAEHRWTMYENHPGFDTPLG VAAYAMVQERATYFNYEELRKRIRSEYGLPEQTTEEERKRGKQIGAAAAFKIVGVDEIAHHGMFLRVIDIYKRYLPYETL DMVFRVLNGFNMPALHILPNAEELKASLERTKLYTPLKHGRFVANPVLDAMGFNNKRALERAVQQAKLLPTGLGPEHVAI GRDGEFVISMQPDAEIEAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39234; Mature: 39234
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHEQQTPVTPLVINGPWTREARERAIAEEVKLAYIEYFRKAVKTRNWLPWDDLPLREME CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH QYGHMLSEDTVTLVESFLGVEDYVGDYVEDTINIVHGKRERRNIQLQWGAEESKHAEAWE HHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHCCEEEEECCCCCCCHHHHE LVLLHSGRRTKEQLETYRDQVAEHRWTMYENHPGFDTPLGVAAYAMVQERATYFNYEELR EEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHH KRIRSEYGLPEQTTEEERKRGKQIGAAAAFKIVGVDEIAHHGMFLRVIDIYKRYLPYETL HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEEECHHHHHHCCHHHHHHHHHHHHCCHHHH DMVFRVLNGFNMPALHILPNAEELKASLERTKLYTPLKHGRFVANPVLDAMGFNNKRALE HHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHCCCCHHHHH RAVQQAKLLPTGLGPEHVAIGRDGEFVISMQPDAEIEAA HHHHHHHCCCCCCCCCCEEECCCCCEEEEECCCCCCCCC >Mature Secondary Structure MLHEQQTPVTPLVINGPWTREARERAIAEEVKLAYIEYFRKAVKTRNWLPWDDLPLREME CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH QYGHMLSEDTVTLVESFLGVEDYVGDYVEDTINIVHGKRERRNIQLQWGAEESKHAEAWE HHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHCCEEEEECCCCCCCHHHHE LVLLHSGRRTKEQLETYRDQVAEHRWTMYENHPGFDTPLGVAAYAMVQERATYFNYEELR EEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHH KRIRSEYGLPEQTTEEERKRGKQIGAAAAFKIVGVDEIAHHGMFLRVIDIYKRYLPYETL HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEEECHHHHHHCCHHHHHHHHHHHHCCHHHH DMVFRVLNGFNMPALHILPNAEELKASLERTKLYTPLKHGRFVANPVLDAMGFNNKRALE HHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHCCCCHHHHH RAVQQAKLLPTGLGPEHVAIGRDGEFVISMQPDAEIEAA HHHHHHHCCCCCCCCCCEEECCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA