| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897223
Identifier: 159897223
GI number: 159897223
Start: 797949
End: 798803
Strand: Reverse
Name: 159897223
Synonym: Haur_0694
Alternate gene names: NA
Gene position: 798803-797949 (Counterclockwise)
Preceding gene: 159897224
Following gene: 159897222
Centisome position: 12.59
GC content: 33.57
Gene sequence:
>855_bases ATGAAAATTCTTTTATCGCTAGTTGGTGCCCAACCTTTGCCGAACCTTATTCCTATCTATCACCTTAAACCAGATTTAGC ATTGCTTATTTATACTGGTGGAACAGTCAAACAAGCTAATAATACTGCGGCGCTTCTAAGATCTAAAAATATTGAAACTG AAATTATATGTACGGATTCTTATGATATCTCAAAGATTACCCGACAGATAGAGGAAGGTATTTCTAATTTCAGCGCAGGT AATGAGATTTACTTTAATGTTACTGGTGGAACAAAACCGATGTCATTTGCCGCTGCCCAGGTAGCACGAAAATATAACTT TCCTGTGGTTTATCTTGAGAGCGAAGCAGGCAAAAGTAAGTTGCATACATATGCTTGGAAAGATTTTGAATTCCATCTCA TAAAAGAAGATTCTATACCACCTTGTATAGCACTAGAAGATTGGCTAGATGTTCATTTAGGCTTAGAAAATTGGTCTATC GAGAAAGTAAAAGAACCTTTTGAACAAGCAGTTATAGGTATTCTGGAAAAGAATAATATTGAAATATTATCAGCTGTACG CTCTTTCTCAGGACAGATAGATTTAGATGTAATTTATCGTAAGGGTAATCATTTTGGTATTATTGAAGTGAAATTCGGAG AAAAAGGTAAAAAAATTGAAGGTATAAGACAACTTAATACAACGGGTTTACACTTAGGTATTTATTCAAATAAGATTCTA ATTATTACAGAACAACCTGGGAAATCTCAATTAGCCCTTGCAGATGCATCAAATGTGCAAATTCTTTCAGTTAATTTTAA TGGCTCTACTATTGATGAAGAGTCCGAGTTAAAGATATTAAATATTATTAAGTGA
Upstream 100 bases:
>100_bases AATCGAAGCCCTACTTCAACGTTTGAATAAAAAATAAGAGCGCTTTTGATGAGTTAAAAAGGTTCTTCATTAATTTTTAT TTTCACTCAAGGAGTCATCG
Downstream 100 bases:
>100_bases TACTATTCGAGTGGAATTTAACAAAGGAAACCCTATGCTTTTGATTAACTTTGCGCATCCATTGACTGATAAACAGTTTG CTCAAATTGTAGCGATTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MKILLSLVGAQPLPNLIPIYHLKPDLALLIYTGGTVKQANNTAALLRSKNIETEIICTDSYDISKITRQIEEGISNFSAG NEIYFNVTGGTKPMSFAAAQVARKYNFPVVYLESEAGKSKLHTYAWKDFEFHLIKEDSIPPCIALEDWLDVHLGLENWSI EKVKEPFEQAVIGILEKNNIEILSAVRSFSGQIDLDVIYRKGNHFGIIEVKFGEKGKKIEGIRQLNTTGLHLGIYSNKIL IITEQPGKSQLALADASNVQILSVNFNGSTIDEESELKILNIIK
Sequences:
>Translated_284_residues MKILLSLVGAQPLPNLIPIYHLKPDLALLIYTGGTVKQANNTAALLRSKNIETEIICTDSYDISKITRQIEEGISNFSAG NEIYFNVTGGTKPMSFAAAQVARKYNFPVVYLESEAGKSKLHTYAWKDFEFHLIKEDSIPPCIALEDWLDVHLGLENWSI EKVKEPFEQAVIGILEKNNIEILSAVRSFSGQIDLDVIYRKGNHFGIIEVKFGEKGKKIEGIRQLNTTGLHLGIYSNKIL IITEQPGKSQLALADASNVQILSVNFNGSTIDEESELKILNIIK >Mature_284_residues MKILLSLVGAQPLPNLIPIYHLKPDLALLIYTGGTVKQANNTAALLRSKNIETEIICTDSYDISKITRQIEEGISNFSAG NEIYFNVTGGTKPMSFAAAQVARKYNFPVVYLESEAGKSKLHTYAWKDFEFHLIKEDSIPPCIALEDWLDVHLGLENWSI EKVKEPFEQAVIGILEKNNIEILSAVRSFSGQIDLDVIYRKGNHFGIIEVKFGEKGKKIEGIRQLNTTGLHLGIYSNKIL IITEQPGKSQLALADASNVQILSVNFNGSTIDEESELKILNIIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31603; Mature: 31603
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILLSLVGAQPLPNLIPIYHLKPDLALLIYTGGTVKQANNTAALLRSKNIETEIICTDS CEEEEEECCCCCCCCCCEEEEECCCEEEEEEECCCEEECCCCEEEEECCCCCEEEEEECC YDISKITRQIEEGISNFSAGNEIYFNVTGGTKPMSFAAAQVARKYNFPVVYLESEAGKSK CCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCC LHTYAWKDFEFHLIKEDSIPPCIALEDWLDVHLGLENWSIEKVKEPFEQAVIGILEKNNI EEEEEECCEEEEEEECCCCCCEEEECCCEEEEECCCCCCHHHHHHHHHHHHHEECCCCCH EILSAVRSFSGQIDLDVIYRKGNHFGIIEVKFGEKGKKIEGIRQLNTTGLHLGIYSNKIL HHHHHHHHHCCCEEEEEEEECCCEEEEEEEEECCCCCCCHHHHHCCCCEEEEEEECCEEE IITEQPGKSQLALADASNVQILSVNFNGSTIDEESELKILNIIK EEECCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCEEEEEECC >Mature Secondary Structure MKILLSLVGAQPLPNLIPIYHLKPDLALLIYTGGTVKQANNTAALLRSKNIETEIICTDS CEEEEEECCCCCCCCCCEEEEECCCEEEEEEECCCEEECCCCEEEEECCCCCEEEEEECC YDISKITRQIEEGISNFSAGNEIYFNVTGGTKPMSFAAAQVARKYNFPVVYLESEAGKSK CCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCC LHTYAWKDFEFHLIKEDSIPPCIALEDWLDVHLGLENWSIEKVKEPFEQAVIGILEKNNI EEEEEECCEEEEEEECCCCCCEEEECCCEEEEECCCCCCHHHHHHHHHHHHHEECCCCCH EILSAVRSFSGQIDLDVIYRKGNHFGIIEVKFGEKGKKIEGIRQLNTTGLHLGIYSNKIL HHHHHHHHHCCCEEEEEEEECCCEEEEEEEEECCCCCCCHHHHHCCCCEEEEEEECCEEE IITEQPGKSQLALADASNVQILSVNFNGSTIDEESELKILNIIK EEECCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA