| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897206
Identifier: 159897206
GI number: 159897206
Start: 775751
End: 777346
Strand: Reverse
Name: 159897206
Synonym: Haur_0677
Alternate gene names: NA
Gene position: 777346-775751 (Counterclockwise)
Preceding gene: 159897207
Following gene: 159897205
Centisome position: 12.25
GC content: 55.2
Gene sequence:
>1596_bases ATGACGACACCGTTATACGCGCAAGTGCGCACCGCCATCCAGCAATTGCTCGCAGGCCAAACCCTTGACCTGAGCCGAGA CTGGGGCGAATGGTTATCAATGATCCAAAGTTTGGTGTATGCCTTTGAACAGGGCGGCGCTGCTGCCGTCCAAACCGCGC TGGAAACCGCGATGCGGGTTGATAGTCGCGTTGCGGCGCTGGTGGTTGACCCCGCGCCACCCACAGCTTTGCGCACGATG CCACCCTTACCGAGTGACTTGAGCAAAGCCATCCGCCAGCACGGCGCATGTGGCCACTGGCTCGATACCTATATCAACTA CGCCAGTTATGCCAGTCCGGTCACGCCCGCGATTTTTCATGAAGCGGCAGGCCTCTTTTTGGCGGCGACCGCGATCGCGC GGCGGCTGTATTTGCAAATTGGCGAAACCCAGTACTACCCCAATGTCTATGCGCTGTTTGTGGCTCCTCCTGGGCGTTAT GCCAAATCGACAGCGATGAAGGTCGTCGAGCGGGTGTTGCGTCGCGCAGGTCTTGGCCATTTGCTGTTACCCGACAAAAG CACCCCTCAATCGCTGCTCCAGCAGTTTTCGACCGTCATTCCCGACAAGCTGGACAGCTACAGTGATTACGACCGGGAGC AATGGCTACTCGCTCGCGCCCAAGCCGCTCAACGGGCATGGCTGCTTGATGAAGCTGGATTTCTCTTCAGCGATATGAAA AAAGAGTATATGGCCGAGCTGCTCTCGCTCTTACTCAAGCTGTTTGATAATCCCGAGTACTTGGCCCACGAAACGATCAC CCATGGCCGAACAACCATCCGTGATGCCAGTCTTTCATTCCTTGGCGCAACCACACCGAAAAACATTGAGGAACATCTGC GCAGCGAAAAGCTATGGGATGAAGGCTTATGGAGTCGCTTCGCAATTCTGATTCCTGAGCACGACCCAATCTATGCTGAG TTCCCTGATGAACTCACTATGCCCCCGGCGCTACTCGATGGCCTGAAACAGCTTGATTTGCTGTTTCCCAAGCCTGACGC TGAACTGATCGATGATGTGCCCGAGGAGAATATCAAGCGCTTTGTGCGGATCTATAACGAGCATCCCCCCAGTGCCATCC GCCTCGCGTCCGGGGTCATGAGTCTCTGGAAGCGCTATGACAAGGCCGTCCGGTTTGACCTGCCCAATAACGGCTTACCC GATACCTTGTATGCCAGCTATGCCCGTTTCCCGGGGCATGTGTTGCGGGTGGCCATGATTCTGGCCGCGATGGATTGCCC TGAGTTACCCGTGATGATGCAGCTCGATCATCTCAAACGGGCGATCAGCATCGTCGAGCGCTGGCGCAATGACTTGCATC GGATTTGGAGCGATGGGATTCAGAGTGAAGAAACCAAACTGGGCGATACCATCCTTGCCATCCTACGATCATCCCTTTCT GGATTGACGGTGCGCGATTTGTGTCGCCAGACTCATCAGTCCAAAAAAGAGATCACCGAAGTCTTGGAAGTCTTACGCCT CGCAGGCCAAATTGATGTACTTGAAACCAAATCTGCCAATGGGCGCACCATGCAACTCTGGAGGTATAGCGCATGA
Upstream 100 bases:
>100_bases GGCCATTGTGCGATTGGGGCAGCATCCTCATTCCCTGCCCATCAATAGAGATAGTAGTGTGCTGTGGTGAGCATCCTCCC GCAGCACCGAGGATAGATCA
Downstream 100 bases:
>100_bases GAAGTGTCACAGTGTCACAGAAGCGTCACACATCGTTTGTGACGCTAGAAACCCACTCAGGGAGACGCTTCCTTGAGAAG TGTCACAGTGTCACAAGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 531; Mature: 530
Protein sequence:
>531_residues MTTPLYAQVRTAIQQLLAGQTLDLSRDWGEWLSMIQSLVYAFEQGGAAAVQTALETAMRVDSRVAALVVDPAPPTALRTM PPLPSDLSKAIRQHGACGHWLDTYINYASYASPVTPAIFHEAAGLFLAATAIARRLYLQIGETQYYPNVYALFVAPPGRY AKSTAMKVVERVLRRAGLGHLLLPDKSTPQSLLQQFSTVIPDKLDSYSDYDREQWLLARAQAAQRAWLLDEAGFLFSDMK KEYMAELLSLLLKLFDNPEYLAHETITHGRTTIRDASLSFLGATTPKNIEEHLRSEKLWDEGLWSRFAILIPEHDPIYAE FPDELTMPPALLDGLKQLDLLFPKPDAELIDDVPEENIKRFVRIYNEHPPSAIRLASGVMSLWKRYDKAVRFDLPNNGLP DTLYASYARFPGHVLRVAMILAAMDCPELPVMMQLDHLKRAISIVERWRNDLHRIWSDGIQSEETKLGDTILAILRSSLS GLTVRDLCRQTHQSKKEITEVLEVLRLAGQIDVLETKSANGRTMQLWRYSA
Sequences:
>Translated_531_residues MTTPLYAQVRTAIQQLLAGQTLDLSRDWGEWLSMIQSLVYAFEQGGAAAVQTALETAMRVDSRVAALVVDPAPPTALRTM PPLPSDLSKAIRQHGACGHWLDTYINYASYASPVTPAIFHEAAGLFLAATAIARRLYLQIGETQYYPNVYALFVAPPGRY AKSTAMKVVERVLRRAGLGHLLLPDKSTPQSLLQQFSTVIPDKLDSYSDYDREQWLLARAQAAQRAWLLDEAGFLFSDMK KEYMAELLSLLLKLFDNPEYLAHETITHGRTTIRDASLSFLGATTPKNIEEHLRSEKLWDEGLWSRFAILIPEHDPIYAE FPDELTMPPALLDGLKQLDLLFPKPDAELIDDVPEENIKRFVRIYNEHPPSAIRLASGVMSLWKRYDKAVRFDLPNNGLP DTLYASYARFPGHVLRVAMILAAMDCPELPVMMQLDHLKRAISIVERWRNDLHRIWSDGIQSEETKLGDTILAILRSSLS GLTVRDLCRQTHQSKKEITEVLEVLRLAGQIDVLETKSANGRTMQLWRYSA >Mature_530_residues TTPLYAQVRTAIQQLLAGQTLDLSRDWGEWLSMIQSLVYAFEQGGAAAVQTALETAMRVDSRVAALVVDPAPPTALRTMP PLPSDLSKAIRQHGACGHWLDTYINYASYASPVTPAIFHEAAGLFLAATAIARRLYLQIGETQYYPNVYALFVAPPGRYA KSTAMKVVERVLRRAGLGHLLLPDKSTPQSLLQQFSTVIPDKLDSYSDYDREQWLLARAQAAQRAWLLDEAGFLFSDMKK EYMAELLSLLLKLFDNPEYLAHETITHGRTTIRDASLSFLGATTPKNIEEHLRSEKLWDEGLWSRFAILIPEHDPIYAEF PDELTMPPALLDGLKQLDLLFPKPDAELIDDVPEENIKRFVRIYNEHPPSAIRLASGVMSLWKRYDKAVRFDLPNNGLPD TLYASYARFPGHVLRVAMILAAMDCPELPVMMQLDHLKRAISIVERWRNDLHRIWSDGIQSEETKLGDTILAILRSSLSG LTVRDLCRQTHQSKKEITEVLEVLRLAGQIDVLETKSANGRTMQLWRYSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59913; Mature: 59781
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPLYAQVRTAIQQLLAGQTLDLSRDWGEWLSMIQSLVYAFEQGGAAAVQTALETAMRV CCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH DSRVAALVVDPAPPTALRTMPPLPSDLSKAIRQHGACGHWLDTYINYASYASPVTPAIFH HCCEEEEEECCCCCCHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHH EAAGLFLAATAIARRLYLQIGETQYYPNVYALFVAPPGRYAKSTAMKVVERVLRRAGLGH HHHHHHHHHHHHHHHHHHHHCCEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCE LLLPDKSTPQSLLQQFSTVIPDKLDSYSDYDREQWLLARAQAAQRAWLLDEAGFLFSDMK EECCCCCCHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEYMAELLSLLLKLFDNPEYLAHETITHGRTTIRDASLSFLGATTPKNIEEHLRSEKLWD HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH EGLWSRFAILIPEHDPIYAEFPDELTMPPALLDGLKQLDLLFPKPDAELIDDVPEENIKR HHHHHCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHH FVRIYNEHPPSAIRLASGVMSLWKRYDKAVRFDLPNNGLPDTLYASYARFPGHVLRVAMI HHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHCCHHHHHHHHH LAAMDCPELPVMMQLDHLKRAISIVERWRNDLHRIWSDGIQSEETKLGDTILAILRSSLS HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC GLTVRDLCRQTHQSKKEITEVLEVLRLAGQIDVLETKSANGRTMQLWRYSA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEECCC >Mature Secondary Structure TTPLYAQVRTAIQQLLAGQTLDLSRDWGEWLSMIQSLVYAFEQGGAAAVQTALETAMRV CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH DSRVAALVVDPAPPTALRTMPPLPSDLSKAIRQHGACGHWLDTYINYASYASPVTPAIFH HCCEEEEEECCCCCCHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHH EAAGLFLAATAIARRLYLQIGETQYYPNVYALFVAPPGRYAKSTAMKVVERVLRRAGLGH HHHHHHHHHHHHHHHHHHHHCCEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCE LLLPDKSTPQSLLQQFSTVIPDKLDSYSDYDREQWLLARAQAAQRAWLLDEAGFLFSDMK EECCCCCCHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEYMAELLSLLLKLFDNPEYLAHETITHGRTTIRDASLSFLGATTPKNIEEHLRSEKLWD HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH EGLWSRFAILIPEHDPIYAEFPDELTMPPALLDGLKQLDLLFPKPDAELIDDVPEENIKR HHHHHCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHH FVRIYNEHPPSAIRLASGVMSLWKRYDKAVRFDLPNNGLPDTLYASYARFPGHVLRVAMI HHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHCCHHHHHHHHH LAAMDCPELPVMMQLDHLKRAISIVERWRNDLHRIWSDGIQSEETKLGDTILAILRSSLS HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC GLTVRDLCRQTHQSKKEITEVLEVLRLAGQIDVLETKSANGRTMQLWRYSA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA