| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897173
Identifier: 159897173
GI number: 159897173
Start: 742172
End: 743116
Strand: Reverse
Name: 159897173
Synonym: Haur_0644
Alternate gene names: NA
Gene position: 743116-742172 (Counterclockwise)
Preceding gene: 159897176
Following gene: 159897169
Centisome position: 11.71
GC content: 64.44
Gene sequence:
>945_bases GTGAGTCTTGAGCAGCTTTGGGAAGCATACCGCGAGCATGGCTACCGCGCCGATCAGCCAGTTGGCACTGATCCGCTCGA TCTGTTCTACGCCGCGCTGCTGGCGTTTGGCCATCAGGACGTAGCCCGTGCCGCCGATTTCGCCAGCCGGGCGGCAGCGG GTGCGCCAGACGAGCGGGTATTTACCGAGGCGGCAGCCTATCTGGGTCGGGTGGCCAGCCAAGGCAAGCACAATGTTTAC GTCAGCGGCGAAGCTTTCGCGGCCTTCATCGGCGGCGGCGGCAACATCCCGCTCTATGCAGCGACGAGCGCGGCCCTGCA CGCGGCCTATGGCGAGTACGAGCGGCTGGATGTGCTGGATATCGGTGCTGGCAACGGCCACGCCCTGATCCCAGCCCTGA CCCCAAACATCGACCGCTTGGGAGTAGTCGAGCCGTCAGCGGCGCTGCTGGCTGAACTACGCGAGCGCTTAGGGGCCAGC GGACGGCCCATCGAGGCCTTCGCCGTCACCGCGCAGGAGTTTGCGCGTCAGGAGAGTAGCAGCTGGACGATCATCCAAGC CACCTACAGCTTGCACTCAATCCCGCCAGAGGAGCGACCGGAGCTGCTGCGCCGGTTGCGGGACCTGGGCCAACGCCTGC TAATCGTCGAGTTCGACGTGCCGGAGTTTGCCAGTATGTACGACCCGGCGCGAGTCCGCGATATCCTAGGCCGCTACCAG CGTGGACTGGCCGAGTATGCCGACGACGGCGGACTGGTTGCCCAAGGCTTTCTGATGCCAGTCCTTATGGGATACTTCGA CCAGACGGCGGCTCGCACAACCTATGAGCAGCCAATTGTGGAGTGGGCGGAGTTGGTACGTGCGGCTGGCTTCGCAGCGG TCGAAGTCCGCCCACTGTACGACTACTGGTGGGCAACCGCGTGTTTGGTGTCCGGCAGCGACTAG
Upstream 100 bases:
>100_bases CGCCCGCGATGCCACCGACACCGCATTTTTCCGAGTTGACGGCGGCTGATCAGTGGCTTGGGCAGCAAACAGTGTATCGT GTGTTTTGGAGGACGCAATA
Downstream 100 bases:
>100_bases CGTGGAGCTGCGGCGCGGAATGCGTGCACAGCTGAGCTTGAATGCATGACTAGCCGTGCGCGTGCATATGCCTGATGGAA CAACGACAGACCCTATCTGC
Product: type 12 methyltransferase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MSLEQLWEAYREHGYRADQPVGTDPLDLFYAALLAFGHQDVARAADFASRAAAGAPDERVFTEAAAYLGRVASQGKHNVY VSGEAFAAFIGGGGNIPLYAATSAALHAAYGEYERLDVLDIGAGNGHALIPALTPNIDRLGVVEPSAALLAELRERLGAS GRPIEAFAVTAQEFARQESSSWTIIQATYSLHSIPPEERPELLRRLRDLGQRLLIVEFDVPEFASMYDPARVRDILGRYQ RGLAEYADDGGLVAQGFLMPVLMGYFDQTAARTTYEQPIVEWAELVRAAGFAAVEVRPLYDYWWATACLVSGSD
Sequences:
>Translated_314_residues MSLEQLWEAYREHGYRADQPVGTDPLDLFYAALLAFGHQDVARAADFASRAAAGAPDERVFTEAAAYLGRVASQGKHNVY VSGEAFAAFIGGGGNIPLYAATSAALHAAYGEYERLDVLDIGAGNGHALIPALTPNIDRLGVVEPSAALLAELRERLGAS GRPIEAFAVTAQEFARQESSSWTIIQATYSLHSIPPEERPELLRRLRDLGQRLLIVEFDVPEFASMYDPARVRDILGRYQ RGLAEYADDGGLVAQGFLMPVLMGYFDQTAARTTYEQPIVEWAELVRAAGFAAVEVRPLYDYWWATACLVSGSD >Mature_313_residues SLEQLWEAYREHGYRADQPVGTDPLDLFYAALLAFGHQDVARAADFASRAAAGAPDERVFTEAAAYLGRVASQGKHNVYV SGEAFAAFIGGGGNIPLYAATSAALHAAYGEYERLDVLDIGAGNGHALIPALTPNIDRLGVVEPSAALLAELRERLGASG RPIEAFAVTAQEFARQESSSWTIIQATYSLHSIPPEERPELLRRLRDLGQRLLIVEFDVPEFASMYDPARVRDILGRYQR GLAEYADDGGLVAQGFLMPVLMGYFDQTAARTTYEQPIVEWAELVRAAGFAAVEVRPLYDYWWATACLVSGSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34249; Mature: 34118
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLEQLWEAYREHGYRADQPVGTDPLDLFYAALLAFGHQDVARAADFASRAAAGAPDERV CCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHH FTEAAAYLGRVASQGKHNVYVSGEAFAAFIGGGGNIPLYAATSAALHAAYGEYERLDVLD HHHHHHHHHHHHCCCCCEEEECCCEEEEEECCCCCCCEEEHHHHHHHHHHCCCCCEEEEE IGAGNGHALIPALTPNIDRLGVVEPSAALLAELRERLGASGRPIEAFAVTAQEFARQESS ECCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC SWTIIQATYSLHSIPPEERPELLRRLRDLGQRLLIVEFDVPEFASMYDPARVRDILGRYQ CEEEEEEEHHHHCCCCHHHHHHHHHHHHHCCEEEEEEECCCHHHHHCCHHHHHHHHHHHH RGLAEYADDGGLVAQGFLMPVLMGYFDQTAARTTYEQPIVEWAELVRAAGFAAVEVRPLY HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHH DYWWATACLVSGSD HHHHHHHHHCCCCC >Mature Secondary Structure SLEQLWEAYREHGYRADQPVGTDPLDLFYAALLAFGHQDVARAADFASRAAAGAPDERV CHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHH FTEAAAYLGRVASQGKHNVYVSGEAFAAFIGGGGNIPLYAATSAALHAAYGEYERLDVLD HHHHHHHHHHHHCCCCCEEEECCCEEEEEECCCCCCCEEEHHHHHHHHHHCCCCCEEEEE IGAGNGHALIPALTPNIDRLGVVEPSAALLAELRERLGASGRPIEAFAVTAQEFARQESS ECCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC SWTIIQATYSLHSIPPEERPELLRRLRDLGQRLLIVEFDVPEFASMYDPARVRDILGRYQ CEEEEEEEHHHHCCCCHHHHHHHHHHHHHCCEEEEEEECCCHHHHHCCHHHHHHHHHHHH RGLAEYADDGGLVAQGFLMPVLMGYFDQTAARTTYEQPIVEWAELVRAAGFAAVEVRPLY HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHH DYWWATACLVSGSD HHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA