| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is vhb [H]
Identifier: 159897160
GI number: 159897160
Start: 729173
End: 729556
Strand: Reverse
Name: vhb [H]
Synonym: Haur_0631
Alternate gene names: 159897160
Gene position: 729556-729173 (Counterclockwise)
Preceding gene: 159897163
Following gene: 159897157
Centisome position: 11.5
GC content: 51.56
Gene sequence:
>384_bases GTGCAGCAAACCTTTGCCGAGGTTGGCCGCAATCCACAGCAATTGGTCGAAGCCTTTTATGGACAGTTGTTCATGTTGGC TCCCGATTTTCGGCCTTTGTTCCCCGAAGATATGAGCGAGCAAAAGAAGAAATTGTTACAATCGTTGGTCTTGGTCGTCA ACAATCTCAAAAAGCCTGAAGCGGTTTTGCCTGCGGTGCAAGAGCTTGGTCGTCGTCATGTGGATTATGGGGTCAAGCCC GAACACTATCAAACAGTTGGCGCGGCGCTGATTTGGGCCTTATCGCAACAGCTGGGCGAGCAGTGGAATGACGAAGTGCA AGCAGCATGGGTTGCTGCCTATACGCTCGTTGCCAATGTAATGGTCGAGGCCAGCCAAGCCTAA
Upstream 100 bases:
>100_bases TGGGCTTGCGGTTGGTAGGCTAGGCAACGTCCTTGGAGCACCAAAAATATACTGAAAGGATGACGAATGTCTCCATATAA CTCCTGCGGCGATTGAGCTT
Downstream 100 bases:
>100_bases TTCAACGAACATGCGAAGTCCGCCGCCTGTTCGAGTGGAACGGGCGGCGAGAAGAAGTAGCCTTGGCCTGCTTGACAGCC AAGTTCACGCAGCACTTGAA
Product: globin
Products: @TETR01txt*tetrahydropteridine!; NO3-; NAD(P); Proton [C]
Alternate protein names: Soluble cytochrome O [H]
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MQQTFAEVGRNPQQLVEAFYGQLFMLAPDFRPLFPEDMSEQKKKLLQSLVLVVNNLKKPEAVLPAVQELGRRHVDYGVKP EHYQTVGAALIWALSQQLGEQWNDEVQAAWVAAYTLVANVMVEASQA
Sequences:
>Translated_127_residues MQQTFAEVGRNPQQLVEAFYGQLFMLAPDFRPLFPEDMSEQKKKLLQSLVLVVNNLKKPEAVLPAVQELGRRHVDYGVKP EHYQTVGAALIWALSQQLGEQWNDEVQAAWVAAYTLVANVMVEASQA >Mature_127_residues MQQTFAEVGRNPQQLVEAFYGQLFMLAPDFRPLFPEDMSEQKKKLLQSLVLVVNNLKKPEAVLPAVQELGRRHVDYGVKP EHYQTVGAALIWALSQQLGEQWNDEVQAAWVAAYTLVANVMVEASQA
Specific function: This protein functions as a terminal oxidase [H]
COG id: COG1017
COG function: function code C; Hemoglobin-like flavoprotein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the globin family [H]
Homologues:
Organism=Escherichia coli, GI1788903, Length=114, Percent_Identity=29.8245614035088, Blast_Score=62, Evalue=9e-12,
Paralogues:
None
Copy number: 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012292 - InterPro: IPR009050 - InterPro: IPR000971 [H]
Pfam domain/function: PF00042 Globin [H]
EC number: 1.5.1.34 [C]
Molecular weight: Translated: 14312; Mature: 14312
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: PS01033 GLOBIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQTFAEVGRNPQQLVEAFYGQLFMLAPDFRPLFPEDMSEQKKKLLQSLVLVVNNLKKPE CCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCH AVLPAVQELGRRHVDYGVKPEHYQTVGAALIWALSQQLGEQWNDEVQAAWVAAYTLVANV HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MVEASQA HHHHCCC >Mature Secondary Structure MQQTFAEVGRNPQQLVEAFYGQLFMLAPDFRPLFPEDMSEQKKKLLQSLVLVVNNLKKPE CCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCH AVLPAVQELGRRHVDYGVKPEHYQTVGAALIWALSQQLGEQWNDEVQAAWVAAYTLVANV HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MVEASQA HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: FAD [C]
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: dihydropteridine; 2 nitric oxide; O2; NAD(P)H [C]
Specific reaction: NAD(P)H + dihydropteridine = NAD(P)+ @TETR01.txt*tetrahydropteridine! 2 nitric oxide + 2 O2 + NAD(P)H = 2 NO3- + NAD(P) + Proton [C]
General reaction: Redox reaction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3067078; 3736670; 2685332; 2681149; 9115439 [H]