| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897120
Identifier: 159897120
GI number: 159897120
Start: 681340
End: 682311
Strand: Reverse
Name: 159897120
Synonym: Haur_0591
Alternate gene names: NA
Gene position: 682311-681340 (Counterclockwise)
Preceding gene: 159897121
Following gene: 159897114
Centisome position: 10.75
GC content: 53.09
Gene sequence:
>972_bases ATGACGCAGGAATTTGTAACCCAATTTTGGGGAGTGCGCGGCAGTCATCCCAGCACTGGCGCTGATTTTATTAAAACAGG TGGCAATACTTCGTGTGTTGAAATGCGGGTGGCCGGCCAGCAATTGATTTTTGATGCTGGCACAGGGATTGTCGAGCTTG GGCAGCAATTAGTTCAGCAGCCCAATCCACGCCCAATTTTAATTTTGCTCTCGCACTATCATCATGATCATATTCAGGGT TTGCCACATTTTGCGCCGCTGTATCGCGAAGATCAGATGATCTATATCGTGGCCCCGTGGAATCTCTATCAAGATCGGGT TTGGGAATTGTTGGCCAGCGCTTCATCGCACTCGATGCTGGCCGAACGACCCGGCCTTTTGGCCCGCCGCCGCACCTTAT TAATTGAAGGTGGCGAGCGTTTGTGGTGGAATGCCGATGCTGCTACGCCGTTGCGCGTGGCCGCCGACGCTGATGAGCTT TGCCCAACTGGCTCAGTTGAAATTCGTAGTTATCATTCATTAGGCCATCCACGCGGCGGTTCGATGTGCTATCGAGTTGA GCACAATGCGGTCAGCGCAATCTATGCTACCGATATCGAATCGTATATTGGCACCGATCAACGCTTGGCCAATTTTGCCC GCAACAGCGAATTAATTATCCACGATGCCCACTATACGCCTGCTGAATATGCCAACCCCAAGGCCAGCCGCCAAGGTTGG GGCCATAGCACTTGGGCCATGGCGATTGAATTAGCCCAAGCCGCCAATATTAAGCACGTTGCCCTGTTTCACCACGAGCC AGCCCACACCGATAGCCAAATCGACCAGATCGAGGCCGATGCTCAAGCGGTCTATCCATTGGCCTTTGTAGCCCGCGAAG GCATGCAAGTCGATTTATTGGAGCAAACCAGCGAACGCTCACAGGGCGAGTCAATCTCACCAGTTGAGCCAGCCATCCAG CCACTCGCCTAG
Upstream 100 bases:
>100_bases ATAGCACAGCGATTAACCGAATTGTGCATGAACATCTCTTAATTAATACCCCTATCGTAGAATTACGTGACGAGTAAGCA TTGCAACATCGAGGGCACTC
Downstream 100 bases:
>100_bases GGCTTGGCCGCTGCTTTGCTCCATAACGCTTTGGAAATCGCTACGGGTGATAATCTGATAGCGCTTTTGGTCGTTGAGTT GGGCTAAACCTTGGAAGAAG
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Metal-Dependent Hydrolase; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Metal Dependant Beta Lactamase Protein; Beta-Lactamase Superfamily Hydrolase; Metallo-Beta-Lactamase Superfamily; Phytochrome Sensor Protein; Metallo-Beta-Lactamase Superfamily Protein; Conserved Beta-Lactamase Domain Protein; GAF Domain/HD Domain Protein; Metal-Dependent Hydrolase Of Beta-Lactamase Superfamily I
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MTQEFVTQFWGVRGSHPSTGADFIKTGGNTSCVEMRVAGQQLIFDAGTGIVELGQQLVQQPNPRPILILLSHYHHDHIQG LPHFAPLYREDQMIYIVAPWNLYQDRVWELLASASSHSMLAERPGLLARRRTLLIEGGERLWWNADAATPLRVAADADEL CPTGSVEIRSYHSLGHPRGGSMCYRVEHNAVSAIYATDIESYIGTDQRLANFARNSELIIHDAHYTPAEYANPKASRQGW GHSTWAMAIELAQAANIKHVALFHHEPAHTDSQIDQIEADAQAVYPLAFVAREGMQVDLLEQTSERSQGESISPVEPAIQ PLA
Sequences:
>Translated_323_residues MTQEFVTQFWGVRGSHPSTGADFIKTGGNTSCVEMRVAGQQLIFDAGTGIVELGQQLVQQPNPRPILILLSHYHHDHIQG LPHFAPLYREDQMIYIVAPWNLYQDRVWELLASASSHSMLAERPGLLARRRTLLIEGGERLWWNADAATPLRVAADADEL CPTGSVEIRSYHSLGHPRGGSMCYRVEHNAVSAIYATDIESYIGTDQRLANFARNSELIIHDAHYTPAEYANPKASRQGW GHSTWAMAIELAQAANIKHVALFHHEPAHTDSQIDQIEADAQAVYPLAFVAREGMQVDLLEQTSERSQGESISPVEPAIQ PLA >Mature_322_residues TQEFVTQFWGVRGSHPSTGADFIKTGGNTSCVEMRVAGQQLIFDAGTGIVELGQQLVQQPNPRPILILLSHYHHDHIQGL PHFAPLYREDQMIYIVAPWNLYQDRVWELLASASSHSMLAERPGLLARRRTLLIEGGERLWWNADAATPLRVAADADELC PTGSVEIRSYHSLGHPRGGSMCYRVEHNAVSAIYATDIESYIGTDQRLANFARNSELIIHDAHYTPAEYANPKASRQGWG HSTWAMAIELAQAANIKHVALFHHEPAHTDSQIDQIEADAQAVYPLAFVAREGMQVDLLEQTSERSQGESISPVEPAIQP LA
Specific function: Unknown
COG id: COG1235
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35857; Mature: 35725
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQEFVTQFWGVRGSHPSTGADFIKTGGNTSCVEMRVAGQQLIFDAGTGIVELGQQLVQQ CCHHHHHHHHCCCCCCCCCCCHHHHCCCCCEEEEEEECCCEEEEECCCCHHHHHHHHHHC PNPRPILILLSHYHHDHIQGLPHFAPLYREDQMIYIVAPWNLYQDRVWELLASASSHSML CCCCEEEEEEECCCCHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCHHH AERPGLLARRRTLLIEGGERLWWNADAATPLRVAADADELCPTGSVEIRSYHSLGHPRGG HHCCCHHHHCEEEEEECCCEEEECCCCCCCEEEECCHHHHCCCCCEEEEEHHCCCCCCCC SMCYRVEHNAVSAIYATDIESYIGTDQRLANFARNSELIIHDAHYTPAEYANPKASRQGW CEEEEEECCCEEEHHHHHHHHHHCCHHHHHHHHCCCEEEEEECCCCCHHHCCCCHHCCCC GHSTWAMAIELAQAANIKHVALFHHEPAHTDSQIDQIEADAQAVYPLAFVAREGMQVDLL CCHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCEEEHH EQTSERSQGESISPVEPAIQPLA HHHHHHCCCCCCCCCCHHHCCCC >Mature Secondary Structure TQEFVTQFWGVRGSHPSTGADFIKTGGNTSCVEMRVAGQQLIFDAGTGIVELGQQLVQQ CHHHHHHHHCCCCCCCCCCCHHHHCCCCCEEEEEEECCCEEEEECCCCHHHHHHHHHHC PNPRPILILLSHYHHDHIQGLPHFAPLYREDQMIYIVAPWNLYQDRVWELLASASSHSML CCCCEEEEEEECCCCHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCHHH AERPGLLARRRTLLIEGGERLWWNADAATPLRVAADADELCPTGSVEIRSYHSLGHPRGG HHCCCHHHHCEEEEEECCCEEEECCCCCCCEEEECCHHHHCCCCCEEEEEHHCCCCCCCC SMCYRVEHNAVSAIYATDIESYIGTDQRLANFARNSELIIHDAHYTPAEYANPKASRQGW CEEEEEECCCEEEHHHHHHHHHHCCHHHHHHHHCCCEEEEEECCCCCHHHCCCCHHCCCC GHSTWAMAIELAQAANIKHVALFHHEPAHTDSQIDQIEADAQAVYPLAFVAREGMQVDLL CCHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCEEEHH EQTSERSQGESISPVEPAIQPLA HHHHHHCCCCCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA