| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897089
Identifier: 159897089
GI number: 159897089
Start: 650664
End: 651392
Strand: Reverse
Name: 159897089
Synonym: Haur_0560
Alternate gene names: NA
Gene position: 651392-650664 (Counterclockwise)
Preceding gene: 159897090
Following gene: 159897088
Centisome position: 10.26
GC content: 58.3
Gene sequence:
>729_bases ATGGTTCGCTTTTTTCGCTCAGTTAAATTGTTTACTGCTGATAACGGTGGCGGTGGTTCCGGCAGTGGCAACGGTGGCAA TCCACCACCAGCCAACCCGCCTGCGAATCCACCGGCTAACCCTCCCGCTAGTGGCGGCAACCAACCCGATATTGCAGGCC AAATTGCCAATCTGATCGCTCGCCAAGGCAGCCCTGATGCTGCGTTGATGCTGCTGATGCAGGAAAACTATCAGTACCGC GACCAGAATCGCCAGCTGCGCGAGCGTGTTCCTGATGGGGCCGTGGTGCTCAGTGGTGACGATGTGCAGCGCTGGCGGGA CTATCAAGCGCTTGGGCAGCTCGATGAATTGCGCACCCGCTTGACCGAGCGTGAGCAAGCCCAAACCGAGCTGGCCACGT TGCGCACACAAGCCACCATGCGCACGGTTGCTGAGGCGATGCAGTGGAAGCCGAGCGTGCTGGAGCGCTTAGCGGGCAAT GTCACGTTTATCACCAAAACCGAGGGCGACAAGACCACCATCACCGTCAAGGATGGCGACGGGGAAACCCCACTCGATGC CTATGCCGAGAAACACTGGGGTGAATTCATGCCCGCTCTCACGATCGATAGCAACCCTGCACGGCGGGGGACGGGCTTTG TCCATCAAGGTGGTGGCAATCCCAAAAAAGACGACCCAATCACCACTCACAATCAACGGATGGGCTATAGCCTTCCGAAG CGAGGTTAA
Upstream 100 bases:
>100_bases ATTTGGCGACGGTGCATAGCGGTGGCATCTGGGGCGCAAACGCGCAGGTCACGACGGTCAATGCCTTACGCCAATTGCAA TCATAGAGGAGTAATCAACA
Downstream 100 bases:
>100_bases TCATGGCTGGAGTAATCGGTACCGTTAATCAACTTACCAGCCCAATTTGGGCAGGCGATTTCTTAGACCGCGAGCACTTA ATGCCAGGCGGAGCCAAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MVRFFRSVKLFTADNGGGGSGSGNGGNPPPANPPANPPANPPASGGNQPDIAGQIANLIARQGSPDAALMLLMQENYQYR DQNRQLRERVPDGAVVLSGDDVQRWRDYQALGQLDELRTRLTEREQAQTELATLRTQATMRTVAEAMQWKPSVLERLAGN VTFITKTEGDKTTITVKDGDGETPLDAYAEKHWGEFMPALTIDSNPARRGTGFVHQGGGNPKKDDPITTHNQRMGYSLPK RG
Sequences:
>Translated_242_residues MVRFFRSVKLFTADNGGGGSGSGNGGNPPPANPPANPPANPPASGGNQPDIAGQIANLIARQGSPDAALMLLMQENYQYR DQNRQLRERVPDGAVVLSGDDVQRWRDYQALGQLDELRTRLTEREQAQTELATLRTQATMRTVAEAMQWKPSVLERLAGN VTFITKTEGDKTTITVKDGDGETPLDAYAEKHWGEFMPALTIDSNPARRGTGFVHQGGGNPKKDDPITTHNQRMGYSLPK RG >Mature_242_residues MVRFFRSVKLFTADNGGGGSGSGNGGNPPPANPPANPPANPPASGGNQPDIAGQIANLIARQGSPDAALMLLMQENYQYR DQNRQLRERVPDGAVVLSGDDVQRWRDYQALGQLDELRTRLTEREQAQTELATLRTQATMRTVAEAMQWKPSVLERLAGN VTFITKTEGDKTTITVKDGDGETPLDAYAEKHWGEFMPALTIDSNPARRGTGFVHQGGGNPKKDDPITTHNQRMGYSLPK RG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26339; Mature: 26339
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRFFRSVKLFTADNGGGGSGSGNGGNPPPANPPANPPANPPASGGNQPDIAGQIANLIA CCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH RQGSPDAALMLLMQENYQYRDQNRQLRERVPDGAVVLSGDDVQRWRDYQALGQLDELRTR HCCCCHHHEEHHHHHCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH LTEREQAQTELATLRTQATMRTVAEAMQWKPSVLERLAGNVTFITKTEGDKTTITVKDGD HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEECCCCEEEEEEECCC GETPLDAYAEKHWGEFMPALTIDSNPARRGTGFVHQGGGNPKKDDPITTHNQRMGYSLPK CCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCC RG CC >Mature Secondary Structure MVRFFRSVKLFTADNGGGGSGSGNGGNPPPANPPANPPANPPASGGNQPDIAGQIANLIA CCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH RQGSPDAALMLLMQENYQYRDQNRQLRERVPDGAVVLSGDDVQRWRDYQALGQLDELRTR HCCCCHHHEEHHHHHCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH LTEREQAQTELATLRTQATMRTVAEAMQWKPSVLERLAGNVTFITKTEGDKTTITVKDGD HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEECCCCEEEEEEECCC GETPLDAYAEKHWGEFMPALTIDSNPARRGTGFVHQGGGNPKKDDPITTHNQRMGYSLPK CCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCC RG CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA