| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897087
Identifier: 159897087
GI number: 159897087
Start: 648897
End: 649982
Strand: Reverse
Name: 159897087
Synonym: Haur_0558
Alternate gene names: NA
Gene position: 649982-648897 (Counterclockwise)
Preceding gene: 159897088
Following gene: 159897086
Centisome position: 10.24
GC content: 55.89
Gene sequence:
>1086_bases ATGGATATTGCTAGTTTATTGAATCAAGCCCGTGCAGATGGCACGCTCACCCGCCTCATGCGCAATGTGTTGGCCCAGTT CGGGCGGCCCCAACGACGCTACCTTGGCGCGGAGTTGCTGCCTGAGCGCATGGTCGAAGAAAACCAATATACCGAGGAAT CGATCCGCTATCGCACCATTGTGGCGAATGGCGGTACGCGCTATGGCCCCGCCCAAAAGAAGGGCGGCGACCTGATCGGC ACGTTCGATGTCAAGTTGGCCAACAGTGATATTGCTCGTGAATTGAGTGGGCGCGACTATGACATCCTCTTGCGCTACTT AGGCCGCAACGCCTCAATGGATGCCATTGCCGCGCTGACCAATTGGGCTGAAACCACGCTCAACCTTGCCTTGATCGAAG TCAACGAAGCATGGCGCTGGCAAGCGATTGTCGATGCCAGTGTGATCATTGAAGGCGATAACGCCTTTCGGGAACCCGTG GCCTTGACCAATCCCGCAGGCCACCGCGTCAACGTGGCCGACGATTGGGCCGACCCAACCTATGACCCGTTCCAAGATAT TTATGCCATGGCCGATCTGTTGCAGTCCAAGGGCTACACCGTGGGCCGGATGTTTGCAGGCACACCTGTGCTGACCAAGC TGGCTCGCAATCCCAAGGTAGCCGCCCGCACCAGTCACTTTGTTGCGAATAACGGTGGCGCTTTAGAACTCGTGGCGGGT CGCGCCAGCCTGATGGGGGTCAATATGGCCTTGCAAATGGATGGCTTACCGCCGATTGAGCGCTATGACTTGCGCTATAA CACGCAAAACGGTGACGTGCGCTTTTTGCACGAACAAGCCTTTGTCTTAGTCGCGCTCACGGGCCGCAATGAAGAACTGG ATATTCCCGATGGGGAGCAAACCTTGATCACCGATACCTTGGGCTATACCGCTATTGGGAAGCCAGCAGGGCATAGCGAG CCAGGGCGGGTGATTAATACCGAATTCAAGACCGATAAGCCACCACGCATCGAAGGTCAGGCATGGCAAACAAGCTTTCC AATTTTGGCGGAGCCAGAAGCGGTAGCGGTACTTAAAAACATCTAG
Upstream 100 bases:
>100_bases TTTGTGCGCAGCCACTATCAATGCACGGTCGGCAGAGCCTAAGCAGGGCGAAGGCCTCGTCATTCATTCAATCATCAATA CTGTTTAGGAGTTTTGTCCG
Downstream 100 bases:
>100_bases GCGAGCGGAGAAGTTTTCAATCATTCAATGCGTTCAAAGGAGGACACGCATGTCAACCAAGGTCAAGGTCACCTTAACTG ATTCGTGGATGCACCTCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MDIASLLNQARADGTLTRLMRNVLAQFGRPQRRYLGAELLPERMVEENQYTEESIRYRTIVANGGTRYGPAQKKGGDLIG TFDVKLANSDIARELSGRDYDILLRYLGRNASMDAIAALTNWAETTLNLALIEVNEAWRWQAIVDASVIIEGDNAFREPV ALTNPAGHRVNVADDWADPTYDPFQDIYAMADLLQSKGYTVGRMFAGTPVLTKLARNPKVAARTSHFVANNGGALELVAG RASLMGVNMALQMDGLPPIERYDLRYNTQNGDVRFLHEQAFVLVALTGRNEELDIPDGEQTLITDTLGYTAIGKPAGHSE PGRVINTEFKTDKPPRIEGQAWQTSFPILAEPEAVAVLKNI
Sequences:
>Translated_361_residues MDIASLLNQARADGTLTRLMRNVLAQFGRPQRRYLGAELLPERMVEENQYTEESIRYRTIVANGGTRYGPAQKKGGDLIG TFDVKLANSDIARELSGRDYDILLRYLGRNASMDAIAALTNWAETTLNLALIEVNEAWRWQAIVDASVIIEGDNAFREPV ALTNPAGHRVNVADDWADPTYDPFQDIYAMADLLQSKGYTVGRMFAGTPVLTKLARNPKVAARTSHFVANNGGALELVAG RASLMGVNMALQMDGLPPIERYDLRYNTQNGDVRFLHEQAFVLVALTGRNEELDIPDGEQTLITDTLGYTAIGKPAGHSE PGRVINTEFKTDKPPRIEGQAWQTSFPILAEPEAVAVLKNI >Mature_361_residues MDIASLLNQARADGTLTRLMRNVLAQFGRPQRRYLGAELLPERMVEENQYTEESIRYRTIVANGGTRYGPAQKKGGDLIG TFDVKLANSDIARELSGRDYDILLRYLGRNASMDAIAALTNWAETTLNLALIEVNEAWRWQAIVDASVIIEGDNAFREPV ALTNPAGHRVNVADDWADPTYDPFQDIYAMADLLQSKGYTVGRMFAGTPVLTKLARNPKVAARTSHFVANNGGALELVAG RASLMGVNMALQMDGLPPIERYDLRYNTQNGDVRFLHEQAFVLVALTGRNEELDIPDGEQTLITDTLGYTAIGKPAGHSE PGRVINTEFKTDKPPRIEGQAWQTSFPILAEPEAVAVLKNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39818; Mature: 39818
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIASLLNQARADGTLTRLMRNVLAQFGRPQRRYLGAELLPERMVEENQYTEESIRYRTI CCHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHCCCCHHHEEEEEE VANGGTRYGPAQKKGGDLIGTFDVKLANSDIARELSGRDYDILLRYLGRNASMDAIAALT EECCCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHH NWAETTLNLALIEVNEAWRWQAIVDASVIIEGDNAFREPVALTNPAGHRVNVADDWADPT HHHHHEEEEEEEEECCCEEEEEEEEEEEEEECCCCCCCCEEEECCCCCEEEECCCCCCCC YDPFQDIYAMADLLQSKGYTVGRMFAGTPVLTKLARNPKVAARTSHFVANNGGALELVAG CCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCCCEEECCEEEECCCCEEEEEEC RASLMGVNMALQMDGLPPIERYDLRYNTQNGDVRFLHEQAFVLVALTGRNEELDIPDGEQ CCEEEEEEEEEEECCCCCCCCEEEEEECCCCCEEEEEECEEEEEEEECCCCCCCCCCCCC TLITDTLGYTAIGKPAGHSEPGRVINTEFKTDKPPRIEGQAWQTSFPILAEPEAVAVLKN EEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEECCCCCEECCHHHHHHHC I C >Mature Secondary Structure MDIASLLNQARADGTLTRLMRNVLAQFGRPQRRYLGAELLPERMVEENQYTEESIRYRTI CCHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHCCCCHHHEEEEEE VANGGTRYGPAQKKGGDLIGTFDVKLANSDIARELSGRDYDILLRYLGRNASMDAIAALT EECCCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHH NWAETTLNLALIEVNEAWRWQAIVDASVIIEGDNAFREPVALTNPAGHRVNVADDWADPT HHHHHEEEEEEEEECCCEEEEEEEEEEEEEECCCCCCCCEEEECCCCCEEEECCCCCCCC YDPFQDIYAMADLLQSKGYTVGRMFAGTPVLTKLARNPKVAARTSHFVANNGGALELVAG CCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCCCEEECCEEEECCCCEEEEEEC RASLMGVNMALQMDGLPPIERYDLRYNTQNGDVRFLHEQAFVLVALTGRNEELDIPDGEQ CCEEEEEEEEEEECCCCCCCCEEEEEECCCCCEEEEEECEEEEEEEECCCCCCCCCCCCC TLITDTLGYTAIGKPAGHSEPGRVINTEFKTDKPPRIEGQAWQTSFPILAEPEAVAVLKN EEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEECCCCCEECCHHHHHHHC I C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA