| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897049
Identifier: 159897049
GI number: 159897049
Start: 603787
End: 604572
Strand: Reverse
Name: 159897049
Synonym: Haur_0519
Alternate gene names: NA
Gene position: 604572-603787 (Counterclockwise)
Preceding gene: 159897053
Following gene: 159897046
Centisome position: 9.53
GC content: 48.35
Gene sequence:
>786_bases ATGAGTGAATTACGCGGCTTTTCGTTAAGCCAAGAGGAATTATTTGTTTGTTTGATTGTGGCCGATTTGCCCTTGCCGCT GGGCTTTGACGATTTGGCCAATCAAGTCTTTGGCGATTTGCCTGAGCAATATCAACAATATTTATTAGGAGCCGCCGAAC GGAGCCTGATCGCCCACGGCCTGCTCGAATTAACCGATGACCAGCCTGTTTTGGAGCCGATGGTGGCCGAGTGGCTGAGC ATTATTAGCCAACCCAGCCAAACTTGGGTGATTTTGCATCAGCCTGCTGGCCAAAAACAACAGGCAAACTATATTCATCA TGCTAAACAGCAATACCTTTTTCATCGCGGACAAGGCGGTATTCACCAACTGATTGCCCTACCCCACACGCGCGAGATTG TGCAAGCAGCGCTGGATATTATTGAGCCAGCCGAAGTTGAAGTTGCCGAAACGTTAACGGGAAGCTTGAGCGAAGCAGTG TTTCGAAGCATCGCCAGCATGCGTACAATCAAACGCGAACAGGTGGTTGAGCAATTGCAAGCTGGCGGTTTAACTGCCAA TGTGGCTGAAGCATTTGGCCAAAGTTTTGAGCAATTGCGTTCGATCAGTGCCTTAGCATTGCTTCAAAATAAGCCAGAAA GTAGCGTGCAACAGGCTTTTACCTTGGTTTGTGGTGAGCAACAACAATGGTTACTTGTGCCCGAAGCTGAAGGTTCGCTC TATGTGCGCAATCTCGATCTTAATGCATTAGTCCAAGTGCTACACAATTTTGCCCACCCGCAGTAA
Upstream 100 bases:
>100_bases AGCCGTTTAGGATTAACAAGCGAGCCTATCACCAACAACGCTAGCCGTAGTTGGAGTACTGGTATAATCGCATTTTCAAA CTAATCCATGGAGTATCCAA
Downstream 100 bases:
>100_bases GCCAAGTCAAAGCCCCTTGAACGAACTCAAGGGGCTTTTTGGTTTTTAGCGCGTCAGCGTCCACAAACTTTCGCCAGTCC GTAAATTGGTCATCGTTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MSELRGFSLSQEELFVCLIVADLPLPLGFDDLANQVFGDLPEQYQQYLLGAAERSLIAHGLLELTDDQPVLEPMVAEWLS IISQPSQTWVILHQPAGQKQQANYIHHAKQQYLFHRGQGGIHQLIALPHTREIVQAALDIIEPAEVEVAETLTGSLSEAV FRSIASMRTIKREQVVEQLQAGGLTANVAEAFGQSFEQLRSISALALLQNKPESSVQQAFTLVCGEQQQWLLVPEAEGSL YVRNLDLNALVQVLHNFAHPQ
Sequences:
>Translated_261_residues MSELRGFSLSQEELFVCLIVADLPLPLGFDDLANQVFGDLPEQYQQYLLGAAERSLIAHGLLELTDDQPVLEPMVAEWLS IISQPSQTWVILHQPAGQKQQANYIHHAKQQYLFHRGQGGIHQLIALPHTREIVQAALDIIEPAEVEVAETLTGSLSEAV FRSIASMRTIKREQVVEQLQAGGLTANVAEAFGQSFEQLRSISALALLQNKPESSVQQAFTLVCGEQQQWLLVPEAEGSL YVRNLDLNALVQVLHNFAHPQ >Mature_260_residues SELRGFSLSQEELFVCLIVADLPLPLGFDDLANQVFGDLPEQYQQYLLGAAERSLIAHGLLELTDDQPVLEPMVAEWLSI ISQPSQTWVILHQPAGQKQQANYIHHAKQQYLFHRGQGGIHQLIALPHTREIVQAALDIIEPAEVEVAETLTGSLSEAVF RSIASMRTIKREQVVEQLQAGGLTANVAEAFGQSFEQLRSISALALLQNKPESSVQQAFTLVCGEQQQWLLVPEAEGSLY VRNLDLNALVQVLHNFAHPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28947; Mature: 28816
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELRGFSLSQEELFVCLIVADLPLPLGFDDLANQVFGDLPEQYQQYLLGAAERSLIAHG CCCCCCCCCCHHHHEEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LLELTDDQPVLEPMVAEWLSIISQPSQTWVILHQPAGQKQQANYIHHAKQQYLFHRGQGG HHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCC IHQLIALPHTREIVQAALDIIEPAEVEVAETLTGSLSEAVFRSIASMRTIKREQVVEQLQ HHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGGLTANVAEAFGQSFEQLRSISALALLQNKPESSVQQAFTLVCGEQQQWLLVPEAEGSL HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCCE YVRNLDLNALVQVLHNFAHPQ EEEECCHHHHHHHHHHHCCCC >Mature Secondary Structure SELRGFSLSQEELFVCLIVADLPLPLGFDDLANQVFGDLPEQYQQYLLGAAERSLIAHG CCCCCCCCCHHHHEEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LLELTDDQPVLEPMVAEWLSIISQPSQTWVILHQPAGQKQQANYIHHAKQQYLFHRGQGG HHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCC IHQLIALPHTREIVQAALDIIEPAEVEVAETLTGSLSEAVFRSIASMRTIKREQVVEQLQ HHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGGLTANVAEAFGQSFEQLRSISALALLQNKPESSVQQAFTLVCGEQQQWLLVPEAEGSL HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCCE YVRNLDLNALVQVLHNFAHPQ EEEECCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA