| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159897021
Identifier: 159897021
GI number: 159897021
Start: 568929
End: 571535
Strand: Reverse
Name: 159897021
Synonym: Haur_0489
Alternate gene names: NA
Gene position: 571535-568929 (Counterclockwise)
Preceding gene: 159897022
Following gene: 159897018
Centisome position: 9.01
GC content: 52.78
Gene sequence:
>2607_bases ATGGTTCGATCCCGTTGGGTATTTGCCTTACTTGCGATTACCGTTTTATTATCGGTCATCGGGGCTAAGGTGCCGTTCAC CGCTGCGCAAAATCAAGCCAGCACTTCCGACCGTCCATTAGCATTGGCGCAAGGCTTGAAGGATTTGAACACAGTAGCCC AGATTGCTGTGCCAGAACTTGACCTTGCCAAAGAACGTGCTGATGCCGCTAAGCGCCCAAGTAATTTGCCAACGCGTTTC GCCAAAGATTACCAAACCACGCTTGACATCAAGCAAGTGGCTTCAATCGAAATTGTTGGCAATCGTACCGTCGCTCGTTT ACGCATCGACGCACCAAAGGCCTTGTCGATCAACGTAGGCTTTACCAGCTACAACCTCCCCAAGAGTGGCCAATTGTTTC TCTATAGCCCTGATTATCGCTCAATTCTTGGGCCATACAGTGCTGCTGATAACGAAGAGCACGGCCAATTATGGACTCCA ATCGTCGCTGGCGATCAAATGGTTATCGAATACAGCGCCGATAGTGGCGAGTTTGCCCTTGCCGATTTGACCTTGAGCGC AATTAACCGTGGCTTCAGTGGCTTCGGTATTCCCCGCGATCTGTTGGTCGATAAATCTGGCTCGTGTAACGTCGATGTGG TCTGTCCTGAGGGTGATGACTGGCGGGCCGAAATTAACTCAGTTGCCGCTTATACCCGCAATGGCTTGGATATGTGTAGT GGTGCATTGATCAACACCACGGCCAACGACCAAAAACCCTACTTCCTAACCGCGAATCACTGTGGCATCACCGCAGAAAA CGCAGCAACGGTCGTAACCTATTGGAATTACGAATCAACCCTGTGTCGCACGGTTGGCTCAGCCGAGAACGGCACGCCAT TGCCCAAGCCCAACACCACGATGACTGGGGCAACTTTACTGGCCAACTATGCCGCATCCGACTTTGCCTTGATTGAACTT GATGACGAAGTTCCAACCGAATATGCCCCATTCTGGTCTGGTTGGAATGCCCAAAGTGGCGACTTCCCCAGTGTTGTGGC GATTCACCACCCTGGCGTTGAAGAAAAACGCATCAGCTTCGAAAACCAAGCAACCCAAACCACCGATTACCTTGGCACAA CCGTCCCAGGCGGCGGCACCCACATTCGGGTCATCGACTGGGATCTGGGGACAACTGAAGGTGGTTCATCAGGCTCACCA TTGTATGATCCCAATCACCGGATCGTTGGTCAGCTCCATGGTGGTTATGCCGCCTGTGGTAACGACCGCGACGACTGGTA TGGCCGGATTTCGGTTTCGTGGAACGGTGGCGGCTCAAGCACAAGTCGCTTGAAAGATTGGCTTGATCCAACTAACTCAG GCTCATTAGTGCTTGATGGCACAGGTGGAACGCCAGCCTTCACTATGAACGTCAACCCTGCGAGCGTGGCAGTTTGTGCG CCTGTTTCAGCCCAAACAACGGTTAACCTCGGTTGGGTTCAAGGCTTCAGCGAGCCAGTAACCCTCTCGGCCAGCAACTT GCCTGCTGGGGCAACTGCCAGCTTTACGCCAAATCCAGTTATTTCGCCAACCTTAAGTAGCCAACTCACGATTGGCAACC TCAGCACAGCAATGGCAGGCGATTATAGCGTGGTTATCCGTGGCGATAGCACGACGATTAGCCGCACCACCGACCTCGAT CTTAGTATCTCAGGCGGTTTGCCAAGTGCTGCCCCAAGCTTGACGGCTCCTGCTAATAATGCGACCAACGTTAGCGAAAC CCCTGCATTCAGTTGGTCAAGCGCTGCTGGTGCAACCAACTACGTGCTGGAAGTTGCTAGCGATGCCAGCTTCAGCAACT TGGTTTACACCGCAACCACTGAGTTGACCAGCTTGACCAGCGCTCCATTGAGCACCAACACCAAGCACTACTGGCGCGTC CGTGCTGCCAATGCTTGTGGAGTCAGCGCCAATAGCAGCATCTTCAGTTTCACCACCGAAGCTGCGCCAGGCGATTGTCC AATTGGCACCGAAACTGTGGTTGCCTTCAACGAAACCTTTGATAGCGACCCAAGCTGGACTCACGGCGGCACTGGTGATA CCTGGGCCCATGGCGCGTTCGGCTATAACGGTGGCAACGGCATCAAGGCAATTGACCCTGACTCGACATCTGATCAATGG ATTACGACTCCAGCTATCAGCTTGACCGAAGGGTTGACTCCAACGTTGCAATTCTGGAACTCGCAAACCATCGAAGATCG CAATGCTGGTGGCTGTTATGACGGTGCATTGGTTGAAGTTTCAACTGATGGTGGCTCAGCTTGGAACCAAATTCCAAACT CAGCCTTGTTAACCGACCCGTATAACGGTGCAATTAATGCATCAACCAACCCACTCAATGGTAGCCAAGCTTGGTGTGGA GACCCCCAAGATTGGTTGAAGAGCGTGGTTGATTTGAATGCTTACAACGGCCAAAGCGTGATGTTCCGCTTCCGCCTTGC ATCCGACGATTCGGTTGGCCGCCCTGATGGCTGGAAGATCGATAACGTCAGTGTTAAGGCTTGTGTTGCCGAAGCTGAGC CAGAAGGCCCATCGTTGGTCTTCTTGCCAGCAATCACCAAGAACTAA
Upstream 100 bases:
>100_bases TTTGACAAATCATCTAATTATTTTTATAGTAGACTCATTCACAAAATCCTCTCCAAATTCCCCTCAATGTTGTGTGGAAC ACGCCTCAGGAGGTTATGGC
Downstream 100 bases:
>100_bases ACTAATCACCTAAATTCAAAAGCCCCGTGCTTGTAATAAGCACGGGGCTTTGTTTTAGCCGTAATTTATTGGTTTTCTAA GGCAATCACTTTATCCAAGC
Product: lysyl endopeptidase
Products: NA
Alternate protein names: API; Lysyl endopeptidase; Protease I [H]
Number of amino acids: Translated: 868; Mature: 868
Protein sequence:
>868_residues MVRSRWVFALLAITVLLSVIGAKVPFTAAQNQASTSDRPLALAQGLKDLNTVAQIAVPELDLAKERADAAKRPSNLPTRF AKDYQTTLDIKQVASIEIVGNRTVARLRIDAPKALSINVGFTSYNLPKSGQLFLYSPDYRSILGPYSAADNEEHGQLWTP IVAGDQMVIEYSADSGEFALADLTLSAINRGFSGFGIPRDLLVDKSGSCNVDVVCPEGDDWRAEINSVAAYTRNGLDMCS GALINTTANDQKPYFLTANHCGITAENAATVVTYWNYESTLCRTVGSAENGTPLPKPNTTMTGATLLANYAASDFALIEL DDEVPTEYAPFWSGWNAQSGDFPSVVAIHHPGVEEKRISFENQATQTTDYLGTTVPGGGTHIRVIDWDLGTTEGGSSGSP LYDPNHRIVGQLHGGYAACGNDRDDWYGRISVSWNGGGSSTSRLKDWLDPTNSGSLVLDGTGGTPAFTMNVNPASVAVCA PVSAQTTVNLGWVQGFSEPVTLSASNLPAGATASFTPNPVISPTLSSQLTIGNLSTAMAGDYSVVIRGDSTTISRTTDLD LSISGGLPSAAPSLTAPANNATNVSETPAFSWSSAAGATNYVLEVASDASFSNLVYTATTELTSLTSAPLSTNTKHYWRV RAANACGVSANSSIFSFTTEAAPGDCPIGTETVVAFNETFDSDPSWTHGGTGDTWAHGAFGYNGGNGIKAIDPDSTSDQW ITTPAISLTEGLTPTLQFWNSQTIEDRNAGGCYDGALVEVSTDGGSAWNQIPNSALLTDPYNGAINASTNPLNGSQAWCG DPQDWLKSVVDLNAYNGQSVMFRFRLASDDSVGRPDGWKIDNVSVKACVAEAEPEGPSLVFLPAITKN
Sequences:
>Translated_868_residues MVRSRWVFALLAITVLLSVIGAKVPFTAAQNQASTSDRPLALAQGLKDLNTVAQIAVPELDLAKERADAAKRPSNLPTRF AKDYQTTLDIKQVASIEIVGNRTVARLRIDAPKALSINVGFTSYNLPKSGQLFLYSPDYRSILGPYSAADNEEHGQLWTP IVAGDQMVIEYSADSGEFALADLTLSAINRGFSGFGIPRDLLVDKSGSCNVDVVCPEGDDWRAEINSVAAYTRNGLDMCS GALINTTANDQKPYFLTANHCGITAENAATVVTYWNYESTLCRTVGSAENGTPLPKPNTTMTGATLLANYAASDFALIEL DDEVPTEYAPFWSGWNAQSGDFPSVVAIHHPGVEEKRISFENQATQTTDYLGTTVPGGGTHIRVIDWDLGTTEGGSSGSP LYDPNHRIVGQLHGGYAACGNDRDDWYGRISVSWNGGGSSTSRLKDWLDPTNSGSLVLDGTGGTPAFTMNVNPASVAVCA PVSAQTTVNLGWVQGFSEPVTLSASNLPAGATASFTPNPVISPTLSSQLTIGNLSTAMAGDYSVVIRGDSTTISRTTDLD LSISGGLPSAAPSLTAPANNATNVSETPAFSWSSAAGATNYVLEVASDASFSNLVYTATTELTSLTSAPLSTNTKHYWRV RAANACGVSANSSIFSFTTEAAPGDCPIGTETVVAFNETFDSDPSWTHGGTGDTWAHGAFGYNGGNGIKAIDPDSTSDQW ITTPAISLTEGLTPTLQFWNSQTIEDRNAGGCYDGALVEVSTDGGSAWNQIPNSALLTDPYNGAINASTNPLNGSQAWCG DPQDWLKSVVDLNAYNGQSVMFRFRLASDDSVGRPDGWKIDNVSVKACVAEAEPEGPSLVFLPAITKN >Mature_868_residues MVRSRWVFALLAITVLLSVIGAKVPFTAAQNQASTSDRPLALAQGLKDLNTVAQIAVPELDLAKERADAAKRPSNLPTRF AKDYQTTLDIKQVASIEIVGNRTVARLRIDAPKALSINVGFTSYNLPKSGQLFLYSPDYRSILGPYSAADNEEHGQLWTP IVAGDQMVIEYSADSGEFALADLTLSAINRGFSGFGIPRDLLVDKSGSCNVDVVCPEGDDWRAEINSVAAYTRNGLDMCS GALINTTANDQKPYFLTANHCGITAENAATVVTYWNYESTLCRTVGSAENGTPLPKPNTTMTGATLLANYAASDFALIEL DDEVPTEYAPFWSGWNAQSGDFPSVVAIHHPGVEEKRISFENQATQTTDYLGTTVPGGGTHIRVIDWDLGTTEGGSSGSP LYDPNHRIVGQLHGGYAACGNDRDDWYGRISVSWNGGGSSTSRLKDWLDPTNSGSLVLDGTGGTPAFTMNVNPASVAVCA PVSAQTTVNLGWVQGFSEPVTLSASNLPAGATASFTPNPVISPTLSSQLTIGNLSTAMAGDYSVVIRGDSTTISRTTDLD LSISGGLPSAAPSLTAPANNATNVSETPAFSWSSAAGATNYVLEVASDASFSNLVYTATTELTSLTSAPLSTNTKHYWRV RAANACGVSANSSIFSFTTEAAPGDCPIGTETVVAFNETFDSDPSWTHGGTGDTWAHGAFGYNGGNGIKAIDPDSTSDQW ITTPAISLTEGLTPTLQFWNSQTIEDRNAGGCYDGALVEVSTDGGSAWNQIPNSALLTDPYNGAINASTNPLNGSQAWCG DPQDWLKSVVDLNAYNGQSVMFRFRLASDDSVGRPDGWKIDNVSVKACVAEAEPEGPSLVFLPAITKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PKD domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008979 - InterPro: IPR017323 - InterPro: IPR009003 - InterPro: IPR022409 - InterPro: IPR000601 - InterPro: IPR002884 [H]
Pfam domain/function: PF01483 P_proprotein; PF00801 PKD [H]
EC number: =3.4.21.50 [H]
Molecular weight: Translated: 91615; Mature: 91615
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: PS50853 FN3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRSRWVFALLAITVLLSVIGAKVPFTAAQNQASTSDRPLALAQGLKDLNTVAQIAVPEL CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCH DLAKERADAAKRPSNLPTRFAKDYQTTLDIKQVASIEIVGNRTVARLRIDAPKALSINVG HHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHEEEEEEECCCEEEEEEECCCCEEEEEEC FTSYNLPKSGQLFLYSPDYRSILGPYSAADNEEHGQLWTPIVAGDQMVIEYSADSGEFAL EEECCCCCCCEEEEECCCHHHHHCCCCCCCCCCCCCEEEEEEECCEEEEEEECCCCCEEE ADLTLSAINRGFSGFGIPRDLLVDKSGSCNVDVVCPEGDDWRAEINSVAAYTRNGLDMCS EEEEHHHHHCCCCCCCCCHHHEECCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCHHHHC GALINTTANDQKPYFLTANHCGITAENAATVVTYWNYESTLCRTVGSAENGTPLPKPNTT CEEEECCCCCCCCEEEEECCCCEEECCCEEEEEEECCCHHHHHHHCCCCCCCCCCCCCCC MTGATLLANYAASDFALIELDDEVPTEYAPFWSGWNAQSGDFPSVVAIHHPGVEEKRISF CCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHCCC ENQATQTTDYLGTTVPGGGTHIRVIDWDLGTTEGGSSGSPLYDPNHRIVGQLHGGYAACG CCCCCCCHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCEEECC NDRDDWYGRISVSWNGGGSSTSRLKDWLDPTNSGSLVLDGTGGTPAFTMNVNPASVAVCA CCCCCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCEEEECCCCCEEEEEECCCCEEEEEE PVSAQTTVNLGWVQGFSEPVTLSASNLPAGATASFTPNPVISPTLSSQLTIGNLSTAMAG CCCCCEEEEEHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHCCC DYSVVIRGDSTTISRTTDLDLSISGGLPSAAPSLTAPANNATNVSETPAFSWSSAAGATN CEEEEEECCCCEEEEEECEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE YVLEVASDASFSNLVYTATTELTSLTSAPLSTNTKHYWRVRAANACGVSANSSIFSFTTE EEEEEECCCCCCCEEEEEEHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEC AAPGDCPIGTETVVAFNETFDSDPSWTHGGTGDTWAHGAFGYNGGNGIKAIDPDSTSDQW CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEECCCCCCCCE ITTPAISLTEGLTPTLQFWNSQTIEDRNAGGCYDGALVEVSTDGGSAWNQIPNSALLTDP EECCCHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHCCCCEEEECC YNGAINASTNPLNGSQAWCGDPQDWLKSVVDLNAYNGQSVMFRFRLASDDSVGRPDGWKI CCCEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCEEE DNVSVKACVAEAEPEGPSLVFLPAITKN CCEEEEEEEECCCCCCCCEEEEEEECCC >Mature Secondary Structure MVRSRWVFALLAITVLLSVIGAKVPFTAAQNQASTSDRPLALAQGLKDLNTVAQIAVPEL CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCH DLAKERADAAKRPSNLPTRFAKDYQTTLDIKQVASIEIVGNRTVARLRIDAPKALSINVG HHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHEEEEEEECCCEEEEEEECCCCEEEEEEC FTSYNLPKSGQLFLYSPDYRSILGPYSAADNEEHGQLWTPIVAGDQMVIEYSADSGEFAL EEECCCCCCCEEEEECCCHHHHHCCCCCCCCCCCCCEEEEEEECCEEEEEEECCCCCEEE ADLTLSAINRGFSGFGIPRDLLVDKSGSCNVDVVCPEGDDWRAEINSVAAYTRNGLDMCS EEEEHHHHHCCCCCCCCCHHHEECCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCHHHHC GALINTTANDQKPYFLTANHCGITAENAATVVTYWNYESTLCRTVGSAENGTPLPKPNTT CEEEECCCCCCCCEEEEECCCCEEECCCEEEEEEECCCHHHHHHHCCCCCCCCCCCCCCC MTGATLLANYAASDFALIELDDEVPTEYAPFWSGWNAQSGDFPSVVAIHHPGVEEKRISF CCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHCCC ENQATQTTDYLGTTVPGGGTHIRVIDWDLGTTEGGSSGSPLYDPNHRIVGQLHGGYAACG CCCCCCCHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCEEECC NDRDDWYGRISVSWNGGGSSTSRLKDWLDPTNSGSLVLDGTGGTPAFTMNVNPASVAVCA CCCCCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCEEEECCCCCEEEEEECCCCEEEEEE PVSAQTTVNLGWVQGFSEPVTLSASNLPAGATASFTPNPVISPTLSSQLTIGNLSTAMAG CCCCCEEEEEHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHCCC DYSVVIRGDSTTISRTTDLDLSISGGLPSAAPSLTAPANNATNVSETPAFSWSSAAGATN CEEEEEECCCCEEEEEECEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE YVLEVASDASFSNLVYTATTELTSLTSAPLSTNTKHYWRVRAANACGVSANSSIFSFTTE EEEEEECCCCCCCEEEEEEHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEC AAPGDCPIGTETVVAFNETFDSDPSWTHGGTGDTWAHGAFGYNGGNGIKAIDPDSTSDQW CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEECCCCCCCCE ITTPAISLTEGLTPTLQFWNSQTIEDRNAGGCYDGALVEVSTDGGSAWNQIPNSALLTDP EECCCHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHCCCCEEEECC YNGAINASTNPLNGSQAWCGDPQDWLKSVVDLNAYNGQSVMFRFRLASDDSVGRPDGWKI CCCEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCEEE DNVSVKACVAEAEPEGPSLVFLPAITKN CCEEEEEEEECCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2684982; 2492988 [H]