Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159897012

Identifier: 159897012

GI number: 159897012

Start: 558966

End: 559460

Strand: Reverse

Name: 159897012

Synonym: Haur_0480

Alternate gene names: NA

Gene position: 559460-558966 (Counterclockwise)

Preceding gene: 159897017

Following gene: 159897007

Centisome position: 8.82

GC content: 48.08

Gene sequence:

>495_bases
ATGGATTGGATCAAACGCTTAGGTTCTATGCTTTTGATAGGGCTGATCGGACTGTTCGTCGTCGGTATTGTGGTTGATCC
TGGTAATGCTAATTCAGCAACATCAACCAAGCTTGTGCAAGCCAGCGGTGGGCCAACTGCAACTCCGCCGCCAGAATCAG
TTTTACAATCACCAGCCGATAATGCCGTTTTGGCACAACCTATTGCCCCAAATTCATGGACGTTTAATTGGCAAGGCCCA
CGTTGTGGTCACAAAATCTACCTCAATGGCCCAGGCGATCGCAACTATATTTTCAATGGCACTATGGGTTCTGGCCCACC
ACCATCGTCATTTACCTATAGCTATACCCAAACCCAAGCACTCCCCGCCGATGCCTTAGAAGCTTGGAATTGGCATGTTG
AGTATGATTGTGGTTCGTTTCAAGGCCAAAGTGTCACCCGCACATTCAAAGTCGTGCCTGCCAATTTCGTTTATTTACCA
TACGCGACGCATTAG

Upstream 100 bases:

>100_bases
CATGATCGGCTATTGTGTATTGCACCCGAAAAAACTACCATCAATCTATAGCATATTAGCTGTTATTGATACAGCTGAGG
CTATGGTTTAGGAGGATGGT

Downstream 100 bases:

>100_bases
AAGTTCAAGGGTTCGTTATTAACAAAGCAGAGCATAAGGCTCTAGGCTGAAGGCTCTGGGCAAGCGGAAGTTTGTTTGGG
ATAGACCATAAATCCCTAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MDWIKRLGSMLLIGLIGLFVVGIVVDPGNANSATSTKLVQASGGPTATPPPESVLQSPADNAVLAQPIAPNSWTFNWQGP
RCGHKIYLNGPGDRNYIFNGTMGSGPPPSSFTYSYTQTQALPADALEAWNWHVEYDCGSFQGQSVTRTFKVVPANFVYLP
YATH

Sequences:

>Translated_164_residues
MDWIKRLGSMLLIGLIGLFVVGIVVDPGNANSATSTKLVQASGGPTATPPPESVLQSPADNAVLAQPIAPNSWTFNWQGP
RCGHKIYLNGPGDRNYIFNGTMGSGPPPSSFTYSYTQTQALPADALEAWNWHVEYDCGSFQGQSVTRTFKVVPANFVYLP
YATH
>Mature_164_residues
MDWIKRLGSMLLIGLIGLFVVGIVVDPGNANSATSTKLVQASGGPTATPPPESVLQSPADNAVLAQPIAPNSWTFNWQGP
RCGHKIYLNGPGDRNYIFNGTMGSGPPPSSFTYSYTQTQALPADALEAWNWHVEYDCGSFQGQSVTRTFKVVPANFVYLP
YATH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17661; Mature: 17661

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWIKRLGSMLLIGLIGLFVVGIVVDPGNANSATSTKLVQASGGPTATPPPESVLQSPAD
CHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEEEECCCCCCCCCHHHHHCCCCC
NAVLAQPIAPNSWTFNWQGPRCGHKIYLNGPGDRNYIFNGTMGSGPPPSSFTYSYTQTQA
CCEEECCCCCCCEEEECCCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCEEEEECCCCC
LPADALEAWNWHVEYDCGSFQGQSVTRTFKVVPANFVYLPYATH
CCHHHHHHCCEEEEECCCCCCCCCEEEEEEEECCCEEEEEEECC
>Mature Secondary Structure
MDWIKRLGSMLLIGLIGLFVVGIVVDPGNANSATSTKLVQASGGPTATPPPESVLQSPAD
CHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEEEECCCCCCCCCHHHHHCCCCC
NAVLAQPIAPNSWTFNWQGPRCGHKIYLNGPGDRNYIFNGTMGSGPPPSSFTYSYTQTQA
CCEEECCCCCCCEEEECCCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCEEEEECCCCC
LPADALEAWNWHVEYDCGSFQGQSVTRTFKVVPANFVYLPYATH
CCHHHHHHCCEEEEECCCCCCCCCEEEEEEEECCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA