Click here to switch to the map view.

The map label for this gene is sseA [C]

Identifier: 159896937

GI number: 159896937

Start: 475800

End: 476690

Strand: Reverse

Name: sseA [C]

Synonym: Haur_0405

Alternate gene names: 159896937

Gene position: 476690-475800 (Counterclockwise)

Preceding gene: 159896938

Following gene: 159896935

Centisome position: 7.51

GC content: 48.82

Gene sequence:

>891_bases
ATGAGCGATTATGTAAATTCTGAGGTGTTGGTGAGCACGGATTGGGTTGCCGAACATTTGAATGATCCCAATGTGCGCTT
GGTTGAGTCGGATGAAGATATTTTGCTGTATGAAATGGGCCATATCGCCAACGCGGTCAAAATCAATTGGCAAGATGATT
TAAATGATGTACGGATTCGCGATTATATTGATGGCGACGATTTTGCTGCGTTGCTTAGCCGTTTTGGCATTAGCAACGAC
ACGACGATTGTATTTTATGGTGATAAAAATAATTGGTGGGCTTGCTATGCCTATTGGGTTTTCCAATTGCTCGGCCACGA
AAAGCTCAAGATTATGAATGGTGGCCGCAAAAAATGGATCGACGAAGGCCGTGAATTGACCCGCGTTGTGCCAAGCTTCG
AGCCAACCAACTATGTCGTGGGCCAACCAAAGCCTGAAATTCGCGCCTTCCGTGATGATGTTCTGGCGCATATTGGTCGG
CCAAATCCGCGCCAAACTGCAATTGAATTGCCAGCTGGCCATAGCTTGGTCGATGTGCGCTCGCCTGATGAATACACTGG
CAAAAAATTGCACATGCCCGAATATCCCCAAGAAGGTGCTGTGCGCGGTGGCCATATTCCAGGCGCAGTCAATGTGCCGT
GGGCCAAAGCAGTCAACGATGATGGCACGTTCAAAAGCGCCGATGAAATTCGCCAATTGTATGGCGAGGTTGGGGTTACG
CCCGAAAGCGATACCGTGGTGTATTGCCGAATTGGCGAACGCTCATCATTAACCTGGTTTGTGCTGCACGAATTGCTGGG
CTACAAAAATGTGCGCAATTACGACGGCTCGTGGACCGAGTGGGGCAATGTGGTTGGTTTGCCAATTCATAATCCTACGA
CCAGCAAATAG

Upstream 100 bases:

>100_bases
GTTGCCTGCGACCGAACCATTGAAGGTCTATAGCCTTAAAATTGAAGGCGATCAAATTTTGCTTGAAGCTTAAGTATTAA
TCTCGATAAAGGAGCAATCA

Downstream 100 bases:

>100_bases
GGACTGTGCATGCCCACCCCCCACACTCCCTCTCCCGCAGGCGAGGGGAAACCACGAAACCAAAAGCCCCTCTCCCGCCG
CAGTGGGAGAGGGGTTGGGG

Product: rhodanese domain-containing protein

Products: NA

Alternate protein names: Rhodanese-like protein [H]

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MSDYVNSEVLVSTDWVAEHLNDPNVRLVESDEDILLYEMGHIANAVKINWQDDLNDVRIRDYIDGDDFAALLSRFGISND
TTIVFYGDKNNWWACYAYWVFQLLGHEKLKIMNGGRKKWIDEGRELTRVVPSFEPTNYVVGQPKPEIRAFRDDVLAHIGR
PNPRQTAIELPAGHSLVDVRSPDEYTGKKLHMPEYPQEGAVRGGHIPGAVNVPWAKAVNDDGTFKSADEIRQLYGEVGVT
PESDTVVYCRIGERSSLTWFVLHELLGYKNVRNYDGSWTEWGNVVGLPIHNPTTSK

Sequences:

>Translated_296_residues
MSDYVNSEVLVSTDWVAEHLNDPNVRLVESDEDILLYEMGHIANAVKINWQDDLNDVRIRDYIDGDDFAALLSRFGISND
TTIVFYGDKNNWWACYAYWVFQLLGHEKLKIMNGGRKKWIDEGRELTRVVPSFEPTNYVVGQPKPEIRAFRDDVLAHIGR
PNPRQTAIELPAGHSLVDVRSPDEYTGKKLHMPEYPQEGAVRGGHIPGAVNVPWAKAVNDDGTFKSADEIRQLYGEVGVT
PESDTVVYCRIGERSSLTWFVLHELLGYKNVRNYDGSWTEWGNVVGLPIHNPTTSK
>Mature_295_residues
SDYVNSEVLVSTDWVAEHLNDPNVRLVESDEDILLYEMGHIANAVKINWQDDLNDVRIRDYIDGDDFAALLSRFGISNDT
TIVFYGDKNNWWACYAYWVFQLLGHEKLKIMNGGRKKWIDEGRELTRVVPSFEPTNYVVGQPKPEIRAFRDDVLAHIGRP
NPRQTAIELPAGHSLVDVRSPDEYTGKKLHMPEYPQEGAVRGGHIPGAVNVPWAKAVNDDGTFKSADEIRQLYGEVGVTP
ESDTVVYCRIGERSSLTWFVLHELLGYKNVRNYDGSWTEWGNVVGLPIHNPTTSK

Specific function: May Be A Sulfotransferase Involved In The Formation Of Thiosulfate. The Rhodanese Activity Of Ssea Is Weak, Its Participation In Detoxification Of Cyanide May Be Small. May Be Involved In The Enhancement Of Serine-Sensitivity. [C]

COG id: COG2897

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 rhodanese domains [H]

Homologues:

Organism=Homo sapiens, GI17402865, Length=296, Percent_Identity=26.3513513513513, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI194473668, Length=297, Percent_Identity=25.5892255892256, Blast_Score=86, Evalue=6e-17,
Organism=Homo sapiens, GI61835204, Length=297, Percent_Identity=25.5892255892256, Blast_Score=86, Evalue=6e-17,
Organism=Homo sapiens, GI194473681, Length=297, Percent_Identity=25.5892255892256, Blast_Score=86, Evalue=6e-17,
Organism=Escherichia coli, GI87082121, Length=292, Percent_Identity=27.3972602739726, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI87081967, Length=271, Percent_Identity=26.9372693726937, Blast_Score=87, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI71997283, Length=230, Percent_Identity=26.0869565217391, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763
- InterPro:   IPR001307 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: =2.8.1.1 [H]

Molecular weight: Translated: 33590; Mature: 33459

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS00683 RHODANESE_2 ; PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDYVNSEVLVSTDWVAEHLNDPNVRLVESDEDILLYEMGHIANAVKINWQDDLNDVRIR
CCCCCCCEEEEECHHHHHHCCCCCEEEEECCCCEEEEECCCCCCEEEEEECCCCCCEEEE
DYIDGDDFAALLSRFGISNDTTIVFYGDKNNWWACYAYWVFQLLGHEKLKIMNGGRKKWI
EECCCHHHHHHHHHHCCCCCCEEEEECCCCCEEEEHHHHHHHHHCCCEEEEECCCHHHHH
DEGRELTRVVPSFEPTNYVVGQPKPEIRAFRDDVLAHIGRPNPRQTAIELPAGHSLVDVR
HHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEECC
SPDEYTGKKLHMPEYPQEGAVRGGHIPGAVNVPWAKAVNDDGTFKSADEIRQLYGEVGVT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHCCCC
PESDTVVYCRIGERSSLTWFVLHELLGYKNVRNYDGSWTEWGNVVGLPIHNPTTSK
CCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCC
>Mature Secondary Structure 
SDYVNSEVLVSTDWVAEHLNDPNVRLVESDEDILLYEMGHIANAVKINWQDDLNDVRIR
CCCCCCEEEEECHHHHHHCCCCCEEEEECCCCEEEEECCCCCCEEEEEECCCCCCEEEE
DYIDGDDFAALLSRFGISNDTTIVFYGDKNNWWACYAYWVFQLLGHEKLKIMNGGRKKWI
EECCCHHHHHHHHHHCCCCCCEEEEECCCCCEEEEHHHHHHHHHCCCEEEEECCCHHHHH
DEGRELTRVVPSFEPTNYVVGQPKPEIRAFRDDVLAHIGRPNPRQTAIELPAGHSLVDVR
HHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEECC
SPDEYTGKKLHMPEYPQEGAVRGGHIPGAVNVPWAKAVNDDGTFKSADEIRQLYGEVGVT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHCCCC
PESDTVVYCRIGERSSLTWFVLHELLGYKNVRNYDGSWTEWGNVVGLPIHNPTTSK
CCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]