| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is yloU [H]
Identifier: 159896898
GI number: 159896898
Start: 438001
End: 438477
Strand: Reverse
Name: yloU [H]
Synonym: Haur_0366
Alternate gene names: 159896898
Gene position: 438477-438001 (Counterclockwise)
Preceding gene: 159896900
Following gene: 159896897
Centisome position: 6.91
GC content: 51.99
Gene sequence:
>477_bases GTGAACGAGAAAACAAGTCTCGCGAATGTGCGCCAAAATGACGCTGGACGCATCGAAGTACATTCTCGCGCCATTGCTAC TGTGGTAGCCGGGGCGGTAGTACGGTGCTACGGTGTTGTGGGCATGGCCCCGCGCAACTTACGCGATAGTGTCGCCCATG TTTTGCGACCAGAAGATCAATATAAAGGGATTGACGTTCAAGTGAGTACCGAGGCAATTACGGTCGATCTGTTTGTGATC ATCGAGTATGGCACACGGATTGCCACAGTTGCCCGTAATATTATGGAAAGTGTCCAATATGCAGTGGTGCATGCACTCGG CGAGGCCAATATCACAGTCAATGTGCATGTCCAAGGCTTGCGGATCGAACAAGCTGATAAAGAACCAAAAGATGCAACCG AAGGCCAGCCCAGCCGCTGGCGACGTTTTGGCGTAATGGGAGGTCTGCGTGGACAGCGCACCGAAGAATCAAATTGA
Upstream 100 bases:
>100_bases ATCATAAAGCAGTAGCGCGGTTGGTTCCGCGCTATTCTCATCAAAACCGGACGCTCGTGAGCGCCGACCATCGAACCATC TAGTTGCGAGGACTGTTCGA
Downstream 100 bases:
>100_bases TGGCACGCGGCTGTTGGCGGTATTCCGCGCAGCCGCCGCATGGTTTAGCCAGAATGTGGCGACTGTCAACGCCCTAAATG TGTTTCCTGTGCCCGATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MNEKTSLANVRQNDAGRIEVHSRAIATVVAGAVVRCYGVVGMAPRNLRDSVAHVLRPEDQYKGIDVQVSTEAITVDLFVI IEYGTRIATVARNIMESVQYAVVHALGEANITVNVHVQGLRIEQADKEPKDATEGQPSRWRRFGVMGGLRGQRTEESN
Sequences:
>Translated_158_residues MNEKTSLANVRQNDAGRIEVHSRAIATVVAGAVVRCYGVVGMAPRNLRDSVAHVLRPEDQYKGIDVQVSTEAITVDLFVI IEYGTRIATVARNIMESVQYAVVHALGEANITVNVHVQGLRIEQADKEPKDATEGQPSRWRRFGVMGGLRGQRTEESN >Mature_158_residues MNEKTSLANVRQNDAGRIEVHSRAIATVVAGAVVRCYGVVGMAPRNLRDSVAHVLRPEDQYKGIDVQVSTEAITVDLFVI IEYGTRIATVARNIMESVQYAVVHALGEANITVNVHVQGLRIEQADKEPKDATEGQPSRWRRFGVMGGLRGQRTEESN
Specific function: Unknown
COG id: COG1302
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the asp23 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005531 [H]
Pfam domain/function: PF03780 DUF322 [H]
EC number: NA
Molecular weight: Translated: 17368; Mature: 17368
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEKTSLANVRQNDAGRIEVHSRAIATVVAGAVVRCYGVVGMAPRNLRDSVAHVLRPEDQ CCCCCCHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHH YKGIDVQVSTEAITVDLFVIIEYGTRIATVARNIMESVQYAVVHALGEANITVNVHVQGL CCCCEEEEECCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEE RIEQADKEPKDATEGQPSRWRRFGVMGGLRGQRTEESN EEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MNEKTSLANVRQNDAGRIEVHSRAIATVVAGAVVRCYGVVGMAPRNLRDSVAHVLRPEDQ CCCCCCHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHH YKGIDVQVSTEAITVDLFVIIEYGTRIATVARNIMESVQYAVVHALGEANITVNVHVQGL CCCCEEEEECCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEE RIEQADKEPKDATEGQPSRWRRFGVMGGLRGQRTEESN EEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9534248; 9384377 [H]