| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896865
Identifier: 159896865
GI number: 159896865
Start: 396063
End: 397805
Strand: Direct
Name: 159896865
Synonym: Haur_0332
Alternate gene names: NA
Gene position: 396063-397805 (Clockwise)
Preceding gene: 159896863
Following gene: 159896870
Centisome position: 6.24
GC content: 50.66
Gene sequence:
>1743_bases ATGGTTCTTCGAAGGATGATGTTTGTTTTGCTGGTTATTTTTAGCTTGAGCACTGTTTCGGCAACGTCGCTGGAAACTCC CTCTGCTGAGCCACTCGACGCAGCAAGCCCCGCTAGCCCAGCCGCCACCAATGCCTACACCATGCGAGCTGGATTCCCTG CAACCAAGCCGAATGGTTCATATTTTTCATCACCAACCGTCGTTGATCTATTTAAAGATGGTTCGCCCGAGATTCTTTCA GCAGATGCAACTGGTTGTATTTGGGGTTACAACATTTATGGTCAATTGTTGCCTGGCTTTCCCTGGATGACTGGCGGTGC GTGTGCCAATACCCCGCGGATCAATGGTTCGTTGGTGGTCGCTGACATTAACGAAGATGGCTTATTGGAAATTGTGGTTG GCACACGCGGCAAAGGCACAAGCGTTGGTCAGCGCGGCAAGGTCATTGTTTATCAACGCAATGGAGCCATTTTGAGCGGT TGGCCCAAAGAAATGGAATGGGCCTACATCACCAACGGCAACTTCCCCGAGGTGGTGCATGTCGCTGTTGACGATATTAT TGGTGATAGCAAACTTGAGGTGATTGCGACTACCACGAATGAGGCGGGTAGTAATACTGATTATGCACCCAATGTGCATG CGTGGTATTACACGGGGAATGTCGTTACTGGCTACCCCAAAAGCTCCGATAAAGGCTCGGGCATTTGGGGCCACCCCGCC TTGGCCGACCTCGACAATAACGGCAAATCGGAGATCTTCGTTGGCCGCGATGAACTCTATTTCTATCGCTATAAAAACGA TGGAACCCAATATGCAGGCTGGCCAATTCAGACCTATACCCATGTCAACCAAACGACTTGGAATGTTCACGATTATATTG AGTTTACCCGCTCTGGCCCAGCTATCGCCGATTTAGATAATGATGGCAGTTACGAGGTGATTGCAGCAGGTAAAGTGCGG ACTCCAGACGGCGATCCGCATAACAACTACGACCCGCAAAGTGCTAGTGCGGTTTTCGTAACTGAGCCAGATGGTACTCG CCGCCCTGGCTGGACTGATGCCAAACGCGCTGGCGCACCGTTGGATGTCAACTTTACCCCCAATAATCCGATTGTTGTCG CCGATTTGGATGGCAATGGTGAAAAGGAATTTGTAGTTACCTTCGATGATGGTACAATTCGCGCCTATCGCGAAAACGGC ACGCAAATCTGGTCGTATTTCTATGCTGAGGAACCAGTCCAAGGTGCGCCAACCCGCAAAGTATTTGGTAGCGAAGTCGT CATTGCCGATGTTACGGGTGACCGCAAGCTAGATATTGTCTTTGGTACGTATTCATTCGACCGACTTTATGCGGGGATTG TCGGGTTGTATGCCCTCGATGCCCGCAATGGAGCCTTGCATTCGGGCTTTCCACTGAGTTTGCCCAATGAAGGCACGGCT AGCGATAACAGTGCTGGCTCGCAGAAAGGGATTCAAGCCGCCCCAACTATCTCCGATATCGATAATAACTGCTATGTCGA AATTTTGGCCCACAGTCGGGCGGGCAATATTTATGTTTGGGAAACCCTAGGCCGCAATTTGCCTGAATTAATGCCTTGGC CGATGAGCCGCCAGAACTTACAGCGCACTGCGTGGGTGCAAAATCCACCTGAACCACGCCAACACGTATTTGCCCCCGAG CAAATTCAAGGCGGTGATTTCAATGTCTATTTGCCAATGACCCGCATGGGTTGCGATTTCTAG
Upstream 100 bases:
>100_bases ATAGGACTGTTGGCCTATGGTCAATCCAGCGCTAGCATAGCACGATCAACCCATTATTTCCATGGAACTGCCACGTTTGC AGTCAAGAGGAGTGTCTAGT
Downstream 100 bases:
>100_bases AGTTGTTGCCAAAGCAGGGATGGTTGCGGCCATCCCTGTTTTGTTAATTATTGCAATGGCAGATTAGGATCAATCTTGTA GCTCTGAACAATCCGCACAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 580; Mature: 580
Protein sequence:
>580_residues MVLRRMMFVLLVIFSLSTVSATSLETPSAEPLDAASPASPAATNAYTMRAGFPATKPNGSYFSSPTVVDLFKDGSPEILS ADATGCIWGYNIYGQLLPGFPWMTGGACANTPRINGSLVVADINEDGLLEIVVGTRGKGTSVGQRGKVIVYQRNGAILSG WPKEMEWAYITNGNFPEVVHVAVDDIIGDSKLEVIATTTNEAGSNTDYAPNVHAWYYTGNVVTGYPKSSDKGSGIWGHPA LADLDNNGKSEIFVGRDELYFYRYKNDGTQYAGWPIQTYTHVNQTTWNVHDYIEFTRSGPAIADLDNDGSYEVIAAGKVR TPDGDPHNNYDPQSASAVFVTEPDGTRRPGWTDAKRAGAPLDVNFTPNNPIVVADLDGNGEKEFVVTFDDGTIRAYRENG TQIWSYFYAEEPVQGAPTRKVFGSEVVIADVTGDRKLDIVFGTYSFDRLYAGIVGLYALDARNGALHSGFPLSLPNEGTA SDNSAGSQKGIQAAPTISDIDNNCYVEILAHSRAGNIYVWETLGRNLPELMPWPMSRQNLQRTAWVQNPPEPRQHVFAPE QIQGGDFNVYLPMTRMGCDF
Sequences:
>Translated_580_residues MVLRRMMFVLLVIFSLSTVSATSLETPSAEPLDAASPASPAATNAYTMRAGFPATKPNGSYFSSPTVVDLFKDGSPEILS ADATGCIWGYNIYGQLLPGFPWMTGGACANTPRINGSLVVADINEDGLLEIVVGTRGKGTSVGQRGKVIVYQRNGAILSG WPKEMEWAYITNGNFPEVVHVAVDDIIGDSKLEVIATTTNEAGSNTDYAPNVHAWYYTGNVVTGYPKSSDKGSGIWGHPA LADLDNNGKSEIFVGRDELYFYRYKNDGTQYAGWPIQTYTHVNQTTWNVHDYIEFTRSGPAIADLDNDGSYEVIAAGKVR TPDGDPHNNYDPQSASAVFVTEPDGTRRPGWTDAKRAGAPLDVNFTPNNPIVVADLDGNGEKEFVVTFDDGTIRAYRENG TQIWSYFYAEEPVQGAPTRKVFGSEVVIADVTGDRKLDIVFGTYSFDRLYAGIVGLYALDARNGALHSGFPLSLPNEGTA SDNSAGSQKGIQAAPTISDIDNNCYVEILAHSRAGNIYVWETLGRNLPELMPWPMSRQNLQRTAWVQNPPEPRQHVFAPE QIQGGDFNVYLPMTRMGCDF >Mature_580_residues MVLRRMMFVLLVIFSLSTVSATSLETPSAEPLDAASPASPAATNAYTMRAGFPATKPNGSYFSSPTVVDLFKDGSPEILS ADATGCIWGYNIYGQLLPGFPWMTGGACANTPRINGSLVVADINEDGLLEIVVGTRGKGTSVGQRGKVIVYQRNGAILSG WPKEMEWAYITNGNFPEVVHVAVDDIIGDSKLEVIATTTNEAGSNTDYAPNVHAWYYTGNVVTGYPKSSDKGSGIWGHPA LADLDNNGKSEIFVGRDELYFYRYKNDGTQYAGWPIQTYTHVNQTTWNVHDYIEFTRSGPAIADLDNDGSYEVIAAGKVR TPDGDPHNNYDPQSASAVFVTEPDGTRRPGWTDAKRAGAPLDVNFTPNNPIVVADLDGNGEKEFVVTFDDGTIRAYRENG TQIWSYFYAEEPVQGAPTRKVFGSEVVIADVTGDRKLDIVFGTYSFDRLYAGIVGLYALDARNGALHSGFPLSLPNEGTA SDNSAGSQKGIQAAPTISDIDNNCYVEILAHSRAGNIYVWETLGRNLPELMPWPMSRQNLQRTAWVQNPPEPRQHVFAPE QIQGGDFNVYLPMTRMGCDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63175; Mature: 63175
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: PS00398 RECOMBINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLRRMMFVLLVIFSLSTVSATSLETPSAEPLDAASPASPAATNAYTMRAGFPATKPNGS CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC YFSSPTVVDLFKDGSPEILSADATGCIWGYNIYGQLLPGFPWMTGGACANTPRINGSLVV EECCCCEEEEECCCCCCEEECCCCEEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCEEEE ADINEDGLLEIVVGTRGKGTSVGQRGKVIVYQRNGAILSGWPKEMEWAYITNGNFPEVVH EECCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCEEECCCCCCEEEEEECCCCCEEEE VAVDDIIGDSKLEVIATTTNEAGSNTDYAPNVHAWYYTGNVVTGYPKSSDKGSGIWGHPA EEEHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCEEECCCCCCCCCCCEECCCC LADLDNNGKSEIFVGRDELYFYRYKNDGTQYAGWPIQTYTHVNQTTWNVHDYIEFTRSGP EEECCCCCCCEEEEECCEEEEEEECCCCCEECCCCEEEEEECCCEEEEHHHHHHHHCCCC AIADLDNDGSYEVIAAGKVRTPDGDPHNNYDPQSASAVFVTEPDGTRRPGWTDAKRAGAP EEEECCCCCCEEEEEECEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHCCCC LDVNFTPNNPIVVADLDGNGEKEFVVTFDDGTIRAYRENGTQIWSYFYAEEPVQGAPTRK EEEEECCCCCEEEEECCCCCCEEEEEEECCCEEEEEECCCCEEEEEEEECCCCCCCCCHH VFGSEVVIADVTGDRKLDIVFGTYSFDRLYAGIVGLYALDARNGALHSGFPLSLPNEGTA CCCCEEEEEECCCCEEEEEEEECCCHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCC SDNSAGSQKGIQAAPTISDIDNNCYVEILAHSRAGNIYVWETLGRNLPELMPWPMSRQNL CCCCCCCCCCCEECCCHHHCCCCEEEEEEEECCCCCEEEEHHHCCCCHHHCCCCCCHHHH QRTAWVQNPPEPRQHVFAPEQIQGGDFNVYLPMTRMGCDF HHHCCCCCCCCHHHHCCCCCCCCCCCEEEEEEHHHCCCCC >Mature Secondary Structure MVLRRMMFVLLVIFSLSTVSATSLETPSAEPLDAASPASPAATNAYTMRAGFPATKPNGS CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC YFSSPTVVDLFKDGSPEILSADATGCIWGYNIYGQLLPGFPWMTGGACANTPRINGSLVV EECCCCEEEEECCCCCCEEECCCCEEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCEEEE ADINEDGLLEIVVGTRGKGTSVGQRGKVIVYQRNGAILSGWPKEMEWAYITNGNFPEVVH EECCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCEEECCCCCCEEEEEECCCCCEEEE VAVDDIIGDSKLEVIATTTNEAGSNTDYAPNVHAWYYTGNVVTGYPKSSDKGSGIWGHPA EEEHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCEEECCCCCCCCCCCEECCCC LADLDNNGKSEIFVGRDELYFYRYKNDGTQYAGWPIQTYTHVNQTTWNVHDYIEFTRSGP EEECCCCCCCEEEEECCEEEEEEECCCCCEECCCCEEEEEECCCEEEEHHHHHHHHCCCC AIADLDNDGSYEVIAAGKVRTPDGDPHNNYDPQSASAVFVTEPDGTRRPGWTDAKRAGAP EEEECCCCCCEEEEEECEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHCCCC LDVNFTPNNPIVVADLDGNGEKEFVVTFDDGTIRAYRENGTQIWSYFYAEEPVQGAPTRK EEEEECCCCCEEEEECCCCCCEEEEEEECCCEEEEEECCCCEEEEEEEECCCCCCCCCHH VFGSEVVIADVTGDRKLDIVFGTYSFDRLYAGIVGLYALDARNGALHSGFPLSLPNEGTA CCCCEEEEEECCCCEEEEEEEECCCHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCC SDNSAGSQKGIQAAPTISDIDNNCYVEILAHSRAGNIYVWETLGRNLPELMPWPMSRQNL CCCCCCCCCCCEECCCHHHCCCCEEEEEEEECCCCCEEEEHHHCCCCHHHCCCCCCHHHH QRTAWVQNPPEPRQHVFAPEQIQGGDFNVYLPMTRMGCDF HHHCCCCCCCCHHHHCCCCCCCCCCCEEEEEEHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA