| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is celA [H]
Identifier: 159896828
GI number: 159896828
Start: 348845
End: 351409
Strand: Reverse
Name: celA [H]
Synonym: Haur_0295
Alternate gene names: 159896828
Gene position: 351409-348845 (Counterclockwise)
Preceding gene: 159896829
Following gene: 159896827
Centisome position: 5.54
GC content: 53.72
Gene sequence:
>2565_bases ATGTCTCGGCACTATTACGCCCGAGGGGCGATGCTGTTAGCGCTGCTAACGATGATTGGTGGCCTGTTGACCACCCAGAA TGCCAAGCCAACCGCCGCCGCTGCCAGTTGTGTGGTCACCTATCGCATTCCCAACGATTGGGGCAGTGGCTTCCTCGGCG ATGTTAATATTCAAAATAATGGTGCAGCCATCAGTAGCTGGACGGTTGGCTGGAGTTTCGCTGGCAATCAGCAAATTACC AACCTCTGGAGTGGGATTGTAACCCAAACTGGCAACCAAGTAAGCGTGCGTAACGCAGGCTGGAACGGCACGATCAGCAG TGGTGGTGCAGTCAACTTTGGCTTCCAAGGAACCTACAGCGGTGCTAATGCAATCCCAACGGTGTTTACATTAAATGGTG TGGTTTGTGGTGAAACGAATCCGAACCCAACCGCAACCACTCCACCAACCGCAACCACCCGCCCAACCAACACGGTAGTT GTACCAACCAATACACCACGGGCAACTAACACAACCGTACCACCAACTAATACGGCTGTGCCACCAACTAGCACAACTCG CCCAACTAATACGGCTGTGCCGCCAACCGCGACCAACGGCCCAACCAGCACGCCACGGCCCACCAATACCCCAACGGTTG TGCCACCAACCAGCACCCCAACCCAACCAGGCGATGATACCTACGATCAACGCTTCTTGGAAATGTATGCTGAGTTGAAG AACCCAGCTAATGGCTATTTCAGCCCTGAAGGTGTGCCCTACCACTCAATCGAAACCTTGATTGTCGAAGCTCCGGATTA TGGCCACGAAACCACTTCCGAAGCCTATAGCTATTGGTTGTGGCTCGAAGCGATGTACGGTGAGGCAACTGGCAATTGGC AACCATTGGCCGATGCTTGGCGCAACATGGAAATGTACATCATTCCAACCAGCCAAGATCAACCAAGCAGTGGTTCGTAT AATGCCAATAGCCCAGCCACCTATGCTGGCGAATGGGAATTACCCAGCCAATATCCATCACAATTGCAAACCAACGTTTC AGTTGGCCAAGACCCAATCGCCGCTGAATTGCGCTCGGCTTATGGCACCAGCGATGTCTATGGCATGCACTGGTTGCTCG ACGTTGATAACTGGTATGGCTATGGCCGCCGTGGCGATGGCACCAGCAAACCATCATATATCAACACCTTCCAACGTGGC GCTCAAGAATCAGTTTGGGAAACCGTGCCCCATCCATCGTGGGAAAGTTTCAACGATGGCGGCCCCTTCGGCTTCTTGAA CTTGTTCACTGGCGATGCGAGCTATGCCCGCCAATGGCGCTACACCAACGCCCCCGATGCTGATGCCCGTGCTGTCCAAG CGATTTACTGGGCCAAAGTATGGGCCGACGAACAAGGTGGCTCACCAATCGTCAATGGTTTGGTAACCAAGGCCGCCAAG ATGGGCGACTACTTGCGCTACGCCTTCTTCGATAAGTACTTCAAGCAAATTGGCTGTACTTCAACTTCATGTCCAGCTGG TTCAGGCTACAGCAGCGCTCACTACCTATTGTCGTGGTACTACGCTTGGGGTGGTTCGATTGGCAATGGTGGTGGCTGGG CATGGCGCATCGGCAGCAGCCACAATCACTTTGGCTACCAAAACCCAATGGCAGCCTGGATTTTGGGCAGCCAACCAGCC TTCAAGCCAGCTTCAACCAACGGCGCTCGCGACTGGAACACCAGCTTGACCCGCCAAATCGAGTTCTATACTTGGTTGCA ATCAAGCGAAGGTGCCATCGCTGGTGGTGCTACCAATAGCTGGAATGGCCGCTACGAAGCAGCCCCAGCCGGAACCAGCA CCTTCTACAATATGGCCTACGACGAAAAACCAGTCTATCACGATCCCGCTAGCAACACCTGGTTTGGTTTCCAAGCTTGG TCGATGGAACGGGTCGCTGAATATTACTACGCTTCAGGCGATGTCAAAGCCAAGAACGTGCTCGATAAGTGGGTAACCTG GGCTTTGGCCAACACCACCTTGACCAGCAATGGCAGCTATGAAATTCCATCAACCTTGGCTTGGAGCGGCCAACCAGCTA CCTGGAACGCCAGCAATCCAGCCGCTAACACCAACTTGCACGTCACGGTCGTCGATAAGACCCAAGACGTTGGTGTTGCC GCCGCCTATGCCAAAACCTTGATGTACTACAGCGCTGCAACCAAGCGCTATGGCACTCAACATGTCGCTTCACAAACCAT GGCCAAAGAATTGATCGACCGTATGTGGTCAGAATACCGCGATGATAAGGGTGTTGCGAACCCCGAAACCCGCCGCGATT ACAACCGCTTCGATGATCCAGTGTCAGTGCCAAACGGCTGGACTGGCACCATGGCCAATGGTGATCCAATCAACAATTCA TCAACCTTCTTGAGCATTCGCACCAAGTACGAAGATGATCCAGCCTTCCCAGCCGTGCAAGCCTACCTAAACGGTGGCCC TGCTCCAACCTTCACCTACCACCGCTTCTGGGCCCAGGCCGATATCGCAATGGCTTACGCCGAATACGATCGCTTGTTCC AGTAA
Upstream 100 bases:
>100_bases TCGCTAAACCAGTTGTATGGAAATAGATAGCTCTGCCGTCGATTGGGCAGAGGTTCGCTTCGTATTGTCTCTGAACTTTT CATTTACCCAAGGAGTATGT
Downstream 100 bases:
>100_bases GCTCCCACGATGCTCGCTTGCGCCGGCTGGCGAGCATCGCTTAATAAATATTAACTTGGGACTTTTAGGCTATCCATTAA ATATATTAATAAATAGTAGA
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Cellulase A; Endo-1,4-beta-glucanase A [H]
Number of amino acids: Translated: 854; Mature: 853
Protein sequence:
>854_residues MSRHYYARGAMLLALLTMIGGLLTTQNAKPTAAAASCVVTYRIPNDWGSGFLGDVNIQNNGAAISSWTVGWSFAGNQQIT NLWSGIVTQTGNQVSVRNAGWNGTISSGGAVNFGFQGTYSGANAIPTVFTLNGVVCGETNPNPTATTPPTATTRPTNTVV VPTNTPRATNTTVPPTNTAVPPTSTTRPTNTAVPPTATNGPTSTPRPTNTPTVVPPTSTPTQPGDDTYDQRFLEMYAELK NPANGYFSPEGVPYHSIETLIVEAPDYGHETTSEAYSYWLWLEAMYGEATGNWQPLADAWRNMEMYIIPTSQDQPSSGSY NANSPATYAGEWELPSQYPSQLQTNVSVGQDPIAAELRSAYGTSDVYGMHWLLDVDNWYGYGRRGDGTSKPSYINTFQRG AQESVWETVPHPSWESFNDGGPFGFLNLFTGDASYARQWRYTNAPDADARAVQAIYWAKVWADEQGGSPIVNGLVTKAAK MGDYLRYAFFDKYFKQIGCTSTSCPAGSGYSSAHYLLSWYYAWGGSIGNGGGWAWRIGSSHNHFGYQNPMAAWILGSQPA FKPASTNGARDWNTSLTRQIEFYTWLQSSEGAIAGGATNSWNGRYEAAPAGTSTFYNMAYDEKPVYHDPASNTWFGFQAW SMERVAEYYYASGDVKAKNVLDKWVTWALANTTLTSNGSYEIPSTLAWSGQPATWNASNPAANTNLHVTVVDKTQDVGVA AAYAKTLMYYSAATKRYGTQHVASQTMAKELIDRMWSEYRDDKGVANPETRRDYNRFDDPVSVPNGWTGTMANGDPINNS STFLSIRTKYEDDPAFPAVQAYLNGGPAPTFTYHRFWAQADIAMAYAEYDRLFQ
Sequences:
>Translated_854_residues MSRHYYARGAMLLALLTMIGGLLTTQNAKPTAAAASCVVTYRIPNDWGSGFLGDVNIQNNGAAISSWTVGWSFAGNQQIT NLWSGIVTQTGNQVSVRNAGWNGTISSGGAVNFGFQGTYSGANAIPTVFTLNGVVCGETNPNPTATTPPTATTRPTNTVV VPTNTPRATNTTVPPTNTAVPPTSTTRPTNTAVPPTATNGPTSTPRPTNTPTVVPPTSTPTQPGDDTYDQRFLEMYAELK NPANGYFSPEGVPYHSIETLIVEAPDYGHETTSEAYSYWLWLEAMYGEATGNWQPLADAWRNMEMYIIPTSQDQPSSGSY NANSPATYAGEWELPSQYPSQLQTNVSVGQDPIAAELRSAYGTSDVYGMHWLLDVDNWYGYGRRGDGTSKPSYINTFQRG AQESVWETVPHPSWESFNDGGPFGFLNLFTGDASYARQWRYTNAPDADARAVQAIYWAKVWADEQGGSPIVNGLVTKAAK MGDYLRYAFFDKYFKQIGCTSTSCPAGSGYSSAHYLLSWYYAWGGSIGNGGGWAWRIGSSHNHFGYQNPMAAWILGSQPA FKPASTNGARDWNTSLTRQIEFYTWLQSSEGAIAGGATNSWNGRYEAAPAGTSTFYNMAYDEKPVYHDPASNTWFGFQAW SMERVAEYYYASGDVKAKNVLDKWVTWALANTTLTSNGSYEIPSTLAWSGQPATWNASNPAANTNLHVTVVDKTQDVGVA AAYAKTLMYYSAATKRYGTQHVASQTMAKELIDRMWSEYRDDKGVANPETRRDYNRFDDPVSVPNGWTGTMANGDPINNS STFLSIRTKYEDDPAFPAVQAYLNGGPAPTFTYHRFWAQADIAMAYAEYDRLFQ >Mature_853_residues SRHYYARGAMLLALLTMIGGLLTTQNAKPTAAAASCVVTYRIPNDWGSGFLGDVNIQNNGAAISSWTVGWSFAGNQQITN LWSGIVTQTGNQVSVRNAGWNGTISSGGAVNFGFQGTYSGANAIPTVFTLNGVVCGETNPNPTATTPPTATTRPTNTVVV PTNTPRATNTTVPPTNTAVPPTSTTRPTNTAVPPTATNGPTSTPRPTNTPTVVPPTSTPTQPGDDTYDQRFLEMYAELKN PANGYFSPEGVPYHSIETLIVEAPDYGHETTSEAYSYWLWLEAMYGEATGNWQPLADAWRNMEMYIIPTSQDQPSSGSYN ANSPATYAGEWELPSQYPSQLQTNVSVGQDPIAAELRSAYGTSDVYGMHWLLDVDNWYGYGRRGDGTSKPSYINTFQRGA QESVWETVPHPSWESFNDGGPFGFLNLFTGDASYARQWRYTNAPDADARAVQAIYWAKVWADEQGGSPIVNGLVTKAAKM GDYLRYAFFDKYFKQIGCTSTSCPAGSGYSSAHYLLSWYYAWGGSIGNGGGWAWRIGSSHNHFGYQNPMAAWILGSQPAF KPASTNGARDWNTSLTRQIEFYTWLQSSEGAIAGGATNSWNGRYEAAPAGTSTFYNMAYDEKPVYHDPASNTWFGFQAWS MERVAEYYYASGDVKAKNVLDKWVTWALANTTLTSNGSYEIPSTLAWSGQPATWNASNPAANTNLHVTVVDKTQDVGVAA AYAKTLMYYSAATKRYGTQHVASQTMAKELIDRMWSEYRDDKGVANPETRRDYNRFDDPVSVPNGWTGTMANGDPINNSS TFLSIRTKYEDDPAFPAVQAYLNGGPAPTFTYHRFWAQADIAMAYAEYDRLFQ
Specific function: The N-terminal domain of CelA encodes for an endoglucanase activity on carboxymethylcellulose. The C-terminal domain probably acts synergistically to hydrolyze crystalline cellulose [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 3 CBM3 (carbohydrate binding type-3) domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR008965 - InterPro: IPR001956 - InterPro: IPR000556 - InterPro: IPR001701 - InterPro: IPR018221 [H]
Pfam domain/function: PF00942 CBM_3; PF02011 Glyco_hydro_48; PF00759 Glyco_hydro_9 [H]
EC number: =3.2.1.4 [H]
Molecular weight: Translated: 93384; Mature: 93253
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRHYYARGAMLLALLTMIGGLLTTQNAKPTAAAASCVVTYRIPNDWGSGFLGDVNIQNN CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEECCC GAAISSWTVGWSFAGNQQITNLWSGIVTQTGNQVSVRNAGWNGTISSGGAVNFGFQGTYS CCEEEEEEEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCEEECCCCCCCC GANAIPTVFTLNGVVCGETNPNPTATTPPTATTRPTNTVVVPTNTPRATNTTVPPTNTAV CCCCCCEEEEECCEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC PPTSTTRPTNTAVPPTATNGPTSTPRPTNTPTVVPPTSTPTQPGDDTYDQRFLEMYAELK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHC NPANGYFSPEGVPYHSIETLIVEAPDYGHETTSEAYSYWLWLEAMYGEATGNWQPLADAW CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHEEEEEEEEEECCCCCCCCHHHHHH RNMEMYIIPTSQDQPSSGSYNANSPATYAGEWELPSQYPSQLQTNVSVGQDPIAAELRSA CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHH YGTSDVYGMHWLLDVDNWYGYGRRGDGTSKPSYINTFQRGAQESVWETVPHPSWESFNDG CCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC GPFGFLNLFTGDASYARQWRYTNAPDADARAVQAIYWAKVWADEQGGSPIVNGLVTKAAK CCEEEEEEEECCHHHHHHCCCCCCCCHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHH MGDYLRYAFFDKYFKQIGCTSTSCPAGSGYSSAHYLLSWYYAWGGSIGNGGGWAWRIGSS HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHEEEEHHCCCCCCCCCEEEEECCC HNHFGYQNPMAAWILGSQPAFKPASTNGARDWNTSLTRQIEFYTWLQSSEGAIAGGATNS CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHEEEEEEEEEECCCCCEECCCCCC WNGRYEAAPAGTSTFYNMAYDEKPVYHDPASNTWFGFQAWSMERVAEYYYASGDVKAKNV CCCEEEECCCCCCCEEEECCCCCCCEECCCCCCEEEEEHHHHHHHHHHHHCCCCCCHHHH LDKWVTWALANTTLTSNGSYEIPSTLAWSGQPATWNASNPAANTNLHVTVVDKTQDVGVA HHHHHHHHHCCCEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCHH AAYAKTLMYYSAATKRYGTQHVASQTMAKELIDRMWSEYRDDKGVANPETRRDYNRFDDP HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC VSVPNGWTGTMANGDPINNSSTFLSIRTKYEDDPAFPAVQAYLNGGPAPTFTYHRFWAQA CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCCCEEHHHHHHHH DIAMAYAEYDRLFQ HHHHHHHHHHHHCC >Mature Secondary Structure SRHYYARGAMLLALLTMIGGLLTTQNAKPTAAAASCVVTYRIPNDWGSGFLGDVNIQNN CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEECCC GAAISSWTVGWSFAGNQQITNLWSGIVTQTGNQVSVRNAGWNGTISSGGAVNFGFQGTYS CCEEEEEEEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCEEECCCCCCCC GANAIPTVFTLNGVVCGETNPNPTATTPPTATTRPTNTVVVPTNTPRATNTTVPPTNTAV CCCCCCEEEEECCEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC PPTSTTRPTNTAVPPTATNGPTSTPRPTNTPTVVPPTSTPTQPGDDTYDQRFLEMYAELK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHC NPANGYFSPEGVPYHSIETLIVEAPDYGHETTSEAYSYWLWLEAMYGEATGNWQPLADAW CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHEEEEEEEEEECCCCCCCCHHHHHH RNMEMYIIPTSQDQPSSGSYNANSPATYAGEWELPSQYPSQLQTNVSVGQDPIAAELRSA CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHH YGTSDVYGMHWLLDVDNWYGYGRRGDGTSKPSYINTFQRGAQESVWETVPHPSWESFNDG CCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC GPFGFLNLFTGDASYARQWRYTNAPDADARAVQAIYWAKVWADEQGGSPIVNGLVTKAAK CCEEEEEEEECCHHHHHHCCCCCCCCHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHH MGDYLRYAFFDKYFKQIGCTSTSCPAGSGYSSAHYLLSWYYAWGGSIGNGGGWAWRIGSS HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHEEEEHHCCCCCCCCCEEEEECCC HNHFGYQNPMAAWILGSQPAFKPASTNGARDWNTSLTRQIEFYTWLQSSEGAIAGGATNS CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHEEEEEEEEEECCCCCEECCCCCC WNGRYEAAPAGTSTFYNMAYDEKPVYHDPASNTWFGFQAWSMERVAEYYYASGDVKAKNV CCCEEEECCCCCCCEEEECCCCCCCEECCCCCCEEEEEHHHHHHHHHHHHCCCCCCHHHH LDKWVTWALANTTLTSNGSYEIPSTLAWSGQPATWNASNPAANTNLHVTVVDKTQDVGVA HHHHHHHHHCCCEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCHH AAYAKTLMYYSAATKRYGTQHVASQTMAKELIDRMWSEYRDDKGVANPETRRDYNRFDDP HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC VSVPNGWTGTMANGDPINNSSTFLSIRTKYEDDPAFPAVQAYLNGGPAPTFTYHRFWAQA CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCCCEEHHHHHHHH DIAMAYAEYDRLFQ HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7612247; 2039230 [H]