| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is fusA [H]
Identifier: 159896822
GI number: 159896822
Start: 340088
End: 342199
Strand: Direct
Name: fusA [H]
Synonym: Haur_0289
Alternate gene names: 159896822
Gene position: 340088-342199 (Clockwise)
Preceding gene: 159896821
Following gene: 159896824
Centisome position: 5.36
GC content: 52.51
Gene sequence:
>2112_bases ATGAAAGAGTACGGTCCGGATCGTATCCACACAATTGGCCTCTTTGGCCATGGCGGTGCTGGCAAAACTACCCTCGCTGA AGCCCTACTTTTCGCCAGCAAAGCTCTCCCACGGATGGGTCGCGTCGAAGATGGCTCGACGGTTAGCGATTACGACCCCG ATGAAGTCAAGCGCCATGCCTCAATTAACCTCTCGGTGATTCCGATCGAATGGAATGGCAACAAGTTCAATTTTATCGAT GTGCCTGGCTATGCCGATTTCCGGGGTGAAGCCGCTGCGGCGCTCCGTGTGATCGATGGGATGGTGCTGGTGCTCGATGC GGCTGGCGGGGTGGAAGTTGGCGCAGAATTACTTTGGCAAATGGCTCGTGAGGCGAATATCCCACGGGTCGTTTTTATTA ACAAGCTTGATCGCGAAAATGCCAATTTCCAGCGGACTGTCGAACAAGCCAAGGGTCTGTTGAGCGAGGCAATCACGCCT GTGCATATGCCAATCGGCAGCGGAGCCAACTTCAAGGGCATCGTGTCGCTACGCAAACGCAAAGCATGGCTGCATCACAA TGGCAAAGATGGCGCGTATGAAATTGCCGAAATTCCCGCCGAAATTCGCCAAGAAGCGCTGCAAATGGCCGATGGCTTGA TCGAAAAAATCGCCATGACCAACGACCACCTGATCGAAGAATATTTAGAAGGTGGAGCCGATGCCCTGAGTGCCGAGGAA ATTCGCCAAGGCTTTCAAGCGGCAATCAATGCGCATACGATTATGCCGCTGTTTATTGGCTCGGCCACCACGCTTTCGGG CATTCCCCAGTTGCTCGATGGGATTCTCGATGCGATTCCTTCGGCGGCCAATCGCTTGACGACCGCCCACGATTTGCGCA ACGATGATGATTATTTCCTTGAAGGCAAGGCTGATGAGCCACTGAGCGCTTTAGTGTTCAAAACCTTGGTTGACCAATAT GTTGGGCGCTTGAGTTTCTTCCGCGTGTTTAGCGGCGAAATTCATTCCAACTCAGTGGTGCGTAATGCTCGTACAGGCCG CGAAGAGCGGATTGGCCAGCTCTTTCAGATGCGCGGCAAGGAGCAAACGCCTGTCTCCTCGGTGAGCGCTGGCGATTTGG GAGCTGTGGCCAAACTCGCTGATACGCTCAGCGGCGACACGCTTTACAATCCTGAAAACCCTTTACGTTTACGCAGTGTT AGCTACCCCGAAGCTGCTTTTACCGCCAAAGTTACGCCTCATTCCAAAAACGACCTCGATAAGTTGGGCAATGCATTGCA TCGGATCGTCGAAGAAGACCCCACCTTGCACCTCGGACGCGACATCCAAACTGGCGAAACCTTGCTTGCTGGTTTGAGCG AAACCCACCTGAATTTTGTGGCCGAGCGAGTCAAACGCAAATTCGATGTGCATTTTGATTTGGCAATACCTAGCGTGCCC TATCGCGAACGCATCAGCAGCACCGCTACTGCCACCTATCGCCACAAAAAACAAACAGGTGGGGCTGGGCAATTTGCCGA AATTTCGCTGCGGCTCGAACCATTGCCAACTGACCCGAATCGTGCTGATCCATTGGAATTTGTCAGCGAGATTGTGGGGG GCGTGGTTTCACGGTCGTTCTGGCCAGCGATTGAAAAGGGTATCCGTGAATCGATGGCCTTGGGCGTGCTTTCTGGCCAT CCAGTGATCGACGTGAAAGCAGCGATTTACGATGGCAAGGAACATCCCGTCGATAGCAAAGAAATTGCCTTCAAAACCGC TGGTAAATTTGCCTTCCGCGAGGCCGCGCGTAAAGCCAACCCAGTTATTATCGAGCCAATTTATGCCTTGAAAATCAATG TGCCCGATGAATATGTTGGCGATATTCTAAGCGATTTGAATGGCAACAAACGTGGGCGAGTGCAAGGTATGGAGCAAATC GGCCATAGTCGCACCTTGATCACAGCCCACGTGCCATTAGCTGAATGCCAGCGTTATGCTACCGATTTGCGCTCAATTAC CCAAGGCCGTGGCGATTTTGTGATGCGGCTTGATCACTATGATGATGTGCCACATAGCGTTGCCCAAACGATCATTGCCA ACTCCAAACAGCAACACGACGATGATGAGTAG
Upstream 100 bases:
>100_bases CTAGGCTTGCCGTTCGGCCACGACGGCGCTATAATCGACAAACAATCAACCTCACATTGATTCCGTCGTCGTTTCAAGTA ACTCCAAAGGAGGAGTCTCT
Downstream 100 bases:
>100_bases GGTTGATAAGGATGAATTATGAAGGATGAGGGATGAAATAGTGATCCACGAAGGACACGAAGGAATACCAAGCAGAAGCC TGCCTTCGTGTCCTTCGTGT
Product: small GTP-binding protein
Products: GDP; phosphate
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 703; Mature: 703
Protein sequence:
>703_residues MKEYGPDRIHTIGLFGHGGAGKTTLAEALLFASKALPRMGRVEDGSTVSDYDPDEVKRHASINLSVIPIEWNGNKFNFID VPGYADFRGEAAAALRVIDGMVLVLDAAGGVEVGAELLWQMAREANIPRVVFINKLDRENANFQRTVEQAKGLLSEAITP VHMPIGSGANFKGIVSLRKRKAWLHHNGKDGAYEIAEIPAEIRQEALQMADGLIEKIAMTNDHLIEEYLEGGADALSAEE IRQGFQAAINAHTIMPLFIGSATTLSGIPQLLDGILDAIPSAANRLTTAHDLRNDDDYFLEGKADEPLSALVFKTLVDQY VGRLSFFRVFSGEIHSNSVVRNARTGREERIGQLFQMRGKEQTPVSSVSAGDLGAVAKLADTLSGDTLYNPENPLRLRSV SYPEAAFTAKVTPHSKNDLDKLGNALHRIVEEDPTLHLGRDIQTGETLLAGLSETHLNFVAERVKRKFDVHFDLAIPSVP YRERISSTATATYRHKKQTGGAGQFAEISLRLEPLPTDPNRADPLEFVSEIVGGVVSRSFWPAIEKGIRESMALGVLSGH PVIDVKAAIYDGKEHPVDSKEIAFKTAGKFAFREAARKANPVIIEPIYALKINVPDEYVGDILSDLNGNKRGRVQGMEQI GHSRTLITAHVPLAECQRYATDLRSITQGRGDFVMRLDHYDDVPHSVAQTIIANSKQQHDDDE
Sequences:
>Translated_703_residues MKEYGPDRIHTIGLFGHGGAGKTTLAEALLFASKALPRMGRVEDGSTVSDYDPDEVKRHASINLSVIPIEWNGNKFNFID VPGYADFRGEAAAALRVIDGMVLVLDAAGGVEVGAELLWQMAREANIPRVVFINKLDRENANFQRTVEQAKGLLSEAITP VHMPIGSGANFKGIVSLRKRKAWLHHNGKDGAYEIAEIPAEIRQEALQMADGLIEKIAMTNDHLIEEYLEGGADALSAEE IRQGFQAAINAHTIMPLFIGSATTLSGIPQLLDGILDAIPSAANRLTTAHDLRNDDDYFLEGKADEPLSALVFKTLVDQY VGRLSFFRVFSGEIHSNSVVRNARTGREERIGQLFQMRGKEQTPVSSVSAGDLGAVAKLADTLSGDTLYNPENPLRLRSV SYPEAAFTAKVTPHSKNDLDKLGNALHRIVEEDPTLHLGRDIQTGETLLAGLSETHLNFVAERVKRKFDVHFDLAIPSVP YRERISSTATATYRHKKQTGGAGQFAEISLRLEPLPTDPNRADPLEFVSEIVGGVVSRSFWPAIEKGIRESMALGVLSGH PVIDVKAAIYDGKEHPVDSKEIAFKTAGKFAFREAARKANPVIIEPIYALKINVPDEYVGDILSDLNGNKRGRVQGMEQI GHSRTLITAHVPLAECQRYATDLRSITQGRGDFVMRLDHYDDVPHSVAQTIIANSKQQHDDDE >Mature_703_residues MKEYGPDRIHTIGLFGHGGAGKTTLAEALLFASKALPRMGRVEDGSTVSDYDPDEVKRHASINLSVIPIEWNGNKFNFID VPGYADFRGEAAAALRVIDGMVLVLDAAGGVEVGAELLWQMAREANIPRVVFINKLDRENANFQRTVEQAKGLLSEAITP VHMPIGSGANFKGIVSLRKRKAWLHHNGKDGAYEIAEIPAEIRQEALQMADGLIEKIAMTNDHLIEEYLEGGADALSAEE IRQGFQAAINAHTIMPLFIGSATTLSGIPQLLDGILDAIPSAANRLTTAHDLRNDDDYFLEGKADEPLSALVFKTLVDQY VGRLSFFRVFSGEIHSNSVVRNARTGREERIGQLFQMRGKEQTPVSSVSAGDLGAVAKLADTLSGDTLYNPENPLRLRSV SYPEAAFTAKVTPHSKNDLDKLGNALHRIVEEDPTLHLGRDIQTGETLLAGLSETHLNFVAERVKRKFDVHFDLAIPSVP YRERISSTATATYRHKKQTGGAGQFAEISLRLEPLPTDPNRADPLEFVSEIVGGVVSRSFWPAIEKGIRESMALGVLSGH PVIDVKAAIYDGKEHPVDSKEIAFKTAGKFAFREAARKANPVIIEPIYALKINVPDEYVGDILSDLNGNKRGRVQGMEQI GHSRTLITAHVPLAECQRYATDLRSITQGRGDFVMRLDHYDDVPHSVAQTIIANSKQQHDDDE
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=698, Percent_Identity=32.9512893982808, Blast_Score=367, Evalue=1e-101, Organism=Homo sapiens, GI19923640, Length=710, Percent_Identity=30.2816901408451, Blast_Score=295, Evalue=1e-79, Organism=Homo sapiens, GI25306287, Length=710, Percent_Identity=28.7323943661972, Blast_Score=245, Evalue=8e-65, Organism=Homo sapiens, GI25306283, Length=391, Percent_Identity=33.2480818414322, Blast_Score=189, Evalue=8e-48, Organism=Homo sapiens, GI94966754, Length=163, Percent_Identity=30.0613496932515, Blast_Score=70, Evalue=6e-12, Organism=Escherichia coli, GI1789738, Length=696, Percent_Identity=36.3505747126437, Blast_Score=458, Evalue=1e-130, Organism=Escherichia coli, GI1790835, Length=470, Percent_Identity=25.1063829787234, Blast_Score=134, Evalue=2e-32, Organism=Escherichia coli, GI48994988, Length=174, Percent_Identity=29.8850574712644, Blast_Score=72, Evalue=9e-14, Organism=Caenorhabditis elegans, GI17533571, Length=704, Percent_Identity=30.5397727272727, Blast_Score=345, Evalue=4e-95, Organism=Caenorhabditis elegans, GI17556745, Length=719, Percent_Identity=24.8956884561892, Blast_Score=206, Evalue=5e-53, Organism=Caenorhabditis elegans, GI17557151, Length=178, Percent_Identity=29.2134831460674, Blast_Score=75, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6323098, Length=704, Percent_Identity=33.0965909090909, Blast_Score=362, Evalue=1e-101, Organism=Saccharomyces cerevisiae, GI6322359, Length=796, Percent_Identity=24.6231155778894, Blast_Score=218, Evalue=2e-57, Organism=Saccharomyces cerevisiae, GI6324707, Length=178, Percent_Identity=28.0898876404494, Blast_Score=64, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6320593, Length=178, Percent_Identity=28.0898876404494, Blast_Score=64, Evalue=8e-11, Organism=Drosophila melanogaster, GI24582462, Length=708, Percent_Identity=33.3333333333333, Blast_Score=372, Evalue=1e-103, Organism=Drosophila melanogaster, GI221458488, Length=719, Percent_Identity=25.452016689847, Blast_Score=228, Evalue=1e-59, Organism=Drosophila melanogaster, GI24585711, Length=817, Percent_Identity=22.6438188494492, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI24585713, Length=817, Percent_Identity=22.6438188494492, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI24585709, Length=817, Percent_Identity=22.6438188494492, Blast_Score=107, Evalue=2e-23,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 77046; Mature: 77046
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEYGPDRIHTIGLFGHGGAGKTTLAEALLFASKALPRMGRVEDGSTVSDYDPDEVKRHA CCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH SINLSVIPIEWNGNKFNFIDVPGYADFRGEAAAALRVIDGMVLVLDAAGGVEVGAELLWQ CCEEEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHCCEEEEEECCCCHHHHHHHHHH MAREANIPRVVFINKLDRENANFQRTVEQAKGLLSEAITPVHMPIGSGANFKGIVSLRKR HHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHH KAWLHHNGKDGAYEIAEIPAEIRQEALQMADGLIEKIAMTNDHLIEEYLEGGADALSAEE HHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHH IRQGFQAAINAHTIMPLFIGSATTLSGIPQLLDGILDAIPSAANRLTTAHDLRNDDDYFL HHHHHHHHHHHHEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE EGKADEPLSALVFKTLVDQYVGRLSFFRVFSGEIHSNSVVRNARTGREERIGQLFQMRGK ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHCCC EQTPVSSVSAGDLGAVAKLADTLSGDTLYNPENPLRLRSVSYPEAAFTAKVTPHSKNDLD CCCCCCCCCCCCHHHHHHHHHHCCCCCEECCCCCCEEEECCCCCHHEEEEECCCCCCHHH KLGNALHRIVEEDPTLHLGRDIQTGETLLAGLSETHLNFVAERVKRKFDVHFDLAIPSVP HHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCC YRERISSTATATYRHKKQTGGAGQFAEISLRLEPLPTDPNRADPLEFVSEIVGGVVSRSF HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH WPAIEKGIRESMALGVLSGHPVIDVKAAIYDGKEHPVDSKEIAFKTAGKFAFREAARKAN HHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCC PVIIEPIYALKINVPDEYVGDILSDLNGNKRGRVQGMEQIGHSRTLITAHVPLAECQRYA CEEEEEEEEEEEECCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEECCCHHHHHHHH TDLRSITQGRGDFVMRLDHYDDVPHSVAQTIIANSKQQHDDDE HHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKEYGPDRIHTIGLFGHGGAGKTTLAEALLFASKALPRMGRVEDGSTVSDYDPDEVKRHA CCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH SINLSVIPIEWNGNKFNFIDVPGYADFRGEAAAALRVIDGMVLVLDAAGGVEVGAELLWQ CCEEEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHCCEEEEEECCCCHHHHHHHHHH MAREANIPRVVFINKLDRENANFQRTVEQAKGLLSEAITPVHMPIGSGANFKGIVSLRKR HHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHH KAWLHHNGKDGAYEIAEIPAEIRQEALQMADGLIEKIAMTNDHLIEEYLEGGADALSAEE HHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHH IRQGFQAAINAHTIMPLFIGSATTLSGIPQLLDGILDAIPSAANRLTTAHDLRNDDDYFL HHHHHHHHHHHHEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE EGKADEPLSALVFKTLVDQYVGRLSFFRVFSGEIHSNSVVRNARTGREERIGQLFQMRGK ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHCCC EQTPVSSVSAGDLGAVAKLADTLSGDTLYNPENPLRLRSVSYPEAAFTAKVTPHSKNDLD CCCCCCCCCCCCHHHHHHHHHHCCCCCEECCCCCCEEEECCCCCHHEEEEECCCCCCHHH KLGNALHRIVEEDPTLHLGRDIQTGETLLAGLSETHLNFVAERVKRKFDVHFDLAIPSVP HHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCC YRERISSTATATYRHKKQTGGAGQFAEISLRLEPLPTDPNRADPLEFVSEIVGGVVSRSF HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH WPAIEKGIRESMALGVLSGHPVIDVKAAIYDGKEHPVDSKEIAFKTAGKFAFREAARKAN HHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCC PVIIEPIYALKINVPDEYVGDILSDLNGNKRGRVQGMEQIGHSRTLITAHVPLAECQRYA CEEEEEEEEEEEECCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEECCCHHHHHHHH TDLRSITQGRGDFVMRLDHYDDVPHSVAQTIIANSKQQHDDDE HHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA