| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896820
Identifier: 159896820
GI number: 159896820
Start: 335656
End: 336636
Strand: Reverse
Name: 159896820
Synonym: Haur_0287
Alternate gene names: NA
Gene position: 336636-335656 (Counterclockwise)
Preceding gene: 159896823
Following gene: 159896811
Centisome position: 5.3
GC content: 44.75
Gene sequence:
>981_bases ATGAGTACGAATATCGATCACCATATTGGGGTTGAAATTACCTTTGACCAGAACCCCAGTCGAACCCACTTTGCGCACTA CTACTATCGCGCTGAATTGTATTATGGAGTCGATGATAAACAGGCATGGTGCTTTACGATGCTGCTCGATGAAGATCGCC ATGTCATGCCAGGCGAGACCGTTCAAGCTTGTCTCTGGTTTCTCAGCCCACAATATCAGTTAGGGCAACTAACAGTCGGA ACACCGTTTTGGCTTCGTTCAGCACAACGGCTTGATGGTACAGGTCATGTGACTCAAATTACCAATTTAGAGCAGGCTGT TCGCGCAAAATCAAAGTATGATTTACCAGTTGAAGTAACATTCCTAGCAATGCCAGCCAATAACCCAAGCCAAGTCTATT CATTATTCTATGGCAAGCATTTGAATGAGTATGATCTGCACAACGGCTACATCAAACTCGCAGCGGGGCACACATCAATC GCTACCAAGCCGAAGCATATTCCCGTGCCATTTGAAATCACGGCCATTACTCTGAATCAATCCGAAATCAACAATCAGCC TTGGTTTACAGAACAACATCAATGGATGATTACTGAAAACTACGCTAGCAATGCAACATTTCCAACAATAAATAACCCCA TTTTGGCCAAAGGTCAAGGCATTCAGCTGCTTGAACATAAGGGGCGATCGTTTATAGCAAACTTAACGATTGCAGCCAAG CAACTGGAACAGTTTCAAAAGGCCACCCATATGCATTATGGCTTTATCTATGGCAGGCTTTTCGAGGGTGAGAATTATGA GTTGAATGGTACCGAACGTTTGCTGATCCTTGAAGAAGGCCAAACGGTCACAATCGGACAACCTGTACGTGGTCATCTCG ATCTGCATGGGATTAAAGAGCATATCAAAGCTTTGCCAAGAGGCTCAAAATTTGTGCTGCGAATTGCTGACCAGACGATT GCCAAAGGTCGGGTGGTTTAG
Upstream 100 bases:
>100_bases ATCCTTGAAAGGTCAGGGGGTGAGGGAACGCTGGCGGTTGTTAATGCGATAAACCATTACAGCTATACTATAAACCTAAT GCAAACAAAAGGAGAGCTAG
Downstream 100 bases:
>100_bases TTCCCTCACGCCCATCCCCTCTCCCACGTCGGCGGGCGAGGGGTATTCCAAGCTTCATGACCGTTGGATTCCCCCTCGCT CGCTAGGCGGGCTAGGGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MSTNIDHHIGVEITFDQNPSRTHFAHYYYRAELYYGVDDKQAWCFTMLLDEDRHVMPGETVQACLWFLSPQYQLGQLTVG TPFWLRSAQRLDGTGHVTQITNLEQAVRAKSKYDLPVEVTFLAMPANNPSQVYSLFYGKHLNEYDLHNGYIKLAAGHTSI ATKPKHIPVPFEITAITLNQSEINNQPWFTEQHQWMITENYASNATFPTINNPILAKGQGIQLLEHKGRSFIANLTIAAK QLEQFQKATHMHYGFIYGRLFEGENYELNGTERLLILEEGQTVTIGQPVRGHLDLHGIKEHIKALPRGSKFVLRIADQTI AKGRVV
Sequences:
>Translated_326_residues MSTNIDHHIGVEITFDQNPSRTHFAHYYYRAELYYGVDDKQAWCFTMLLDEDRHVMPGETVQACLWFLSPQYQLGQLTVG TPFWLRSAQRLDGTGHVTQITNLEQAVRAKSKYDLPVEVTFLAMPANNPSQVYSLFYGKHLNEYDLHNGYIKLAAGHTSI ATKPKHIPVPFEITAITLNQSEINNQPWFTEQHQWMITENYASNATFPTINNPILAKGQGIQLLEHKGRSFIANLTIAAK QLEQFQKATHMHYGFIYGRLFEGENYELNGTERLLILEEGQTVTIGQPVRGHLDLHGIKEHIKALPRGSKFVLRIADQTI AKGRVV >Mature_325_residues STNIDHHIGVEITFDQNPSRTHFAHYYYRAELYYGVDDKQAWCFTMLLDEDRHVMPGETVQACLWFLSPQYQLGQLTVGT PFWLRSAQRLDGTGHVTQITNLEQAVRAKSKYDLPVEVTFLAMPANNPSQVYSLFYGKHLNEYDLHNGYIKLAAGHTSIA TKPKHIPVPFEITAITLNQSEINNQPWFTEQHQWMITENYASNATFPTINNPILAKGQGIQLLEHKGRSFIANLTIAAKQ LEQFQKATHMHYGFIYGRLFEGENYELNGTERLLILEEGQTVTIGQPVRGHLDLHGIKEHIKALPRGSKFVLRIADQTIA KGRVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37163; Mature: 37032
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTNIDHHIGVEITFDQNPSRTHFAHYYYRAELYYGVDDKQAWCFTMLLDEDRHVMPGET CCCCCCEEEEEEEEECCCCCCCEEEEEEEEEEEEECCCCCCEEEEEEEECCCCCCCCCHH VQACLWFLSPQYQLGQLTVGTPFWLRSAQRLDGTGHVTQITNLEQAVRAKSKYDLPVEVT HHHHHHHHCCCCEECEEEECCHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCCCCCEEEE FLAMPANNPSQVYSLFYGKHLNEYDLHNGYIKLAAGHTSIATKPKHIPVPFEITAITLNQ EEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEECCCCCCCCCCEEEEEEEEEH SEINNQPWFTEQHQWMITENYASNATFPTINNPILAKGQGIQLLEHKGRSFIANLTIAAK HHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEECCCCCHHHHHCCCEEEEEHHHHHH QLEQFQKATHMHYGFIYGRLFEGENYELNGTERLLILEEGQTVTIGQPVRGHLDLHGIKE HHHHHHHHHCCEEEEEEEEEECCCCEEECCCEEEEEEECCCEEEECCCCCCCEEHHHHHH HIKALPRGSKFVLRIADQTIAKGRVV HHHHCCCCCEEEEEEECHHCCCCCCC >Mature Secondary Structure STNIDHHIGVEITFDQNPSRTHFAHYYYRAELYYGVDDKQAWCFTMLLDEDRHVMPGET CCCCCEEEEEEEEECCCCCCCEEEEEEEEEEEEECCCCCCEEEEEEEECCCCCCCCCHH VQACLWFLSPQYQLGQLTVGTPFWLRSAQRLDGTGHVTQITNLEQAVRAKSKYDLPVEVT HHHHHHHHCCCCEECEEEECCHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCCCCCEEEE FLAMPANNPSQVYSLFYGKHLNEYDLHNGYIKLAAGHTSIATKPKHIPVPFEITAITLNQ EEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEECCCCCCCCCCEEEEEEEEEH SEINNQPWFTEQHQWMITENYASNATFPTINNPILAKGQGIQLLEHKGRSFIANLTIAAK HHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEECCCCCHHHHHCCCEEEEEHHHHHH QLEQFQKATHMHYGFIYGRLFEGENYELNGTERLLILEEGQTVTIGQPVRGHLDLHGIKE HHHHHHHHHCCEEEEEEEEEECCCCEEECCCEEEEEEECCCEEEECCCCCCCEEHHHHHH HIKALPRGSKFVLRIADQTIAKGRVV HHHHCCCCCEEEEEEECHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA