| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is pimA [H]
Identifier: 159896817
GI number: 159896817
Start: 331065
End: 333407
Strand: Direct
Name: pimA [H]
Synonym: Haur_0284
Alternate gene names: 159896817
Gene position: 331065-333407 (Clockwise)
Preceding gene: 159896816
Following gene: 159896818
Centisome position: 5.22
GC content: 52.37
Gene sequence:
>2343_bases ATGCCGACACCGATTCGCTCAATCTTAATCATTGGAAATTATGCTCCGCGCCAGTGTGGCATAGCAACCTATACCACCGA TTTACGCATGGCCTTGCTTGACGCGTATCCGCAGAGCAGGATCGACGTGATGGCCATGAATGATACTCCCGCAGGCTATG ACTACCCCGATTCAGTCGTCTTTACGATTGATCAGGATGACCCCTATGCCTATTATCAAGCTGCCGATTTTATCCGCTTG AGTTCGTATGACCTTGTGTGTATTCAGCACGAATATGGGATTTTTGGTGGTGCTTCGGGGCGGAATCTGCTCTTGCTCAT TCGTGCTATCACGATTCCGATTGTAACCACCTTACACACGGTGTTACGCGAACCAACCGCCGATCAACATACGATTCTGT GGGAGCTTGCGCAACGATCACAACGGATTATCGTGATGAGTTCGCATGCGGTCGATTTAATGCATACAATCTATGGTATT CCATTGGCTCAGATTGATTGTATTCCGCATGGCATTCCTGATCTGCCGTTTCGCGATGGCTATGAGGATAAACAACACGC GAATCTGATTGGGAAGCAGGTTTTGCTTACCTTCGGCTTGCTTTCGCCAAATAAAGGGATTGAAGATGTCTTACATGCGT TGCCATTGCTGATCAAACAGCATCCGCATGTGCTGTATCTGATTGTTGGCGCAACCCATCCAACCGTTCGTCAAACCTTT GGCGAGGCCTATCGGGAGATGCTTCAGGCCTTAGTCGAGCAACTTGGAATTCAAGCGCATGTGCGGTTTCACGACCAATT TGTGAGTTCCAGCGCTTTAGCAATTTATATGGGTGCGGCTGATATTTATATTACGCCCTATCATACCCAAGAACAAAGCG TCTCGGGTACTTTAGCCTATGCGATTGGGGCAGGCAAGGCGATTGTCTCGACACCCTATTGGTATGCAACCGAACTCTTG GCCCATGGTGGTGGCATGCTGGTTCCGTTTCATGATCCAGCGCTGCTCGCTGAGCAGGTTAACACGCTTTTAGCCGAACC CCAGCTGCGTCAAACCATCCGCGAACGCGCCTATCAACGCGGGCGCACGATGCTCTGGTCGGTTGTTGCCACGCACTATA TGCACAGTTTTATGCAGGCACGAACGCACCCCCTCCATCCCGTGCTAGTGCTGGCGAATCAACCAATCAAGTCCGATTCG CCGATCATCCCGCCGTTATGTCTTGATCATCTGATCGCCATGACTGACGATATGGGCTTGATCCAACATGCGATCTTGAA TATTCCGAATCATCACGAAGGCTATGCGACCGATGATAATGCGCGAGCCTTGATTGCCACGATGCTGCTCGATCCTATCC AAGAACCACAGGCCCAGCGCTTGGCAATGCGCTATTTAGCGTTTCTCTGGTATGCCTTTAATCCAGCGACCCAACGGTTT CGCAACTTTATGGGGGCAAATCGGCAGTGGTTAGAGGCGACAGGCTCGGAAGATGCCCATGCTCGCAGTATCTGGGCACT TGGCACGGTGCTTGAACAGAGCCATGATCCGGGCTTGTGCGGCGTTGCGCAACGACTCCTCCGTTTTGCGCTTCCAGCGG TGGCTCAGCTGACTCACCCACGGCCATGGGCCTTAGCATTGTTGGGTTTCGCTGCCTATCGTCAACGCTTTCCTGGTGAT CGCACGGTTATGGCCAGCCAATTGCACCTCGCTGAACAATTATTGTCCCGCTTTCAAGCGGCGCATCAGCCTGATTGGGA ATGGTTTGATGATCATCTGACCTATGATAATGCGGTTCTGCCGCATGCATTGATTGTCAGCGGTCAAACCCTTCAGCGCC CAGATATGGTTGAGGCTGGGTTAACGGCCTTGACCTGGCTCTGTGCGATTCAGCGGCCTGAGGCTGACCATTTCAAGCCC ATTGGCTCGAATGGGTTTTTCCAGCGTGGGCAAGCTCCAGCCCACTATGATCAACAGCCAATTGAGGCTCAGGCAACCGT GCTGGCAGCCTGTGCCGCCTTTGAAAGCACAGGCGATTCAGGCTGGTACGATGAAGCCCAGCATGCCTTTTATTGGTTTC TCGGCCACAACGATGCAGGCGTAGCCCTTTACGACCCGCGCACTGGTGGCTGTGCTGATGGGCTGGAAATTGATCGGATT AATCAAAATCAGGGGGCTGAATCAACCCTCGCATTTTTAATTGGCCGATTGACGATGCAGACGATCACGCCACCAATCAG GCGCGGAACAGCGGAAAACACGTCAGCCAGCGTCACCCGACCACCGCGCATTCGAGCGGATTTGATTCCGCCACGTGATC CCAATCCATCAAGACCATTGTAG
Upstream 100 bases:
>100_bases ATCAGCTTGATAACCTTTTGCCACGGATTGAAACATTGCGCCACCCACAATATGCCGCTCTGGCAGGGTGATTGCTTCCC GTTAGTATAGGAGGTGTGGC
Downstream 100 bases:
>100_bases TGTCTCTTGGCGAGGCAGTCTGGAATACATGATGATGCAACCTAATCGACTCGATCTCTTCGCACGCCATCCAGCCAACC CGATTTTACAAGCAAGCGAT
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Alpha-mannosyltransferase; Guanosine diphosphomannose-phosphatidyl-inositol alpha-mannosyltransferase; Phosphatidylinositol alpha-mannosyltransferase; PI alpha-mannosyltransferase [H]
Number of amino acids: Translated: 780; Mature: 779
Protein sequence:
>780_residues MPTPIRSILIIGNYAPRQCGIATYTTDLRMALLDAYPQSRIDVMAMNDTPAGYDYPDSVVFTIDQDDPYAYYQAADFIRL SSYDLVCIQHEYGIFGGASGRNLLLLIRAITIPIVTTLHTVLREPTADQHTILWELAQRSQRIIVMSSHAVDLMHTIYGI PLAQIDCIPHGIPDLPFRDGYEDKQHANLIGKQVLLTFGLLSPNKGIEDVLHALPLLIKQHPHVLYLIVGATHPTVRQTF GEAYREMLQALVEQLGIQAHVRFHDQFVSSSALAIYMGAADIYITPYHTQEQSVSGTLAYAIGAGKAIVSTPYWYATELL AHGGGMLVPFHDPALLAEQVNTLLAEPQLRQTIRERAYQRGRTMLWSVVATHYMHSFMQARTHPLHPVLVLANQPIKSDS PIIPPLCLDHLIAMTDDMGLIQHAILNIPNHHEGYATDDNARALIATMLLDPIQEPQAQRLAMRYLAFLWYAFNPATQRF RNFMGANRQWLEATGSEDAHARSIWALGTVLEQSHDPGLCGVAQRLLRFALPAVAQLTHPRPWALALLGFAAYRQRFPGD RTVMASQLHLAEQLLSRFQAAHQPDWEWFDDHLTYDNAVLPHALIVSGQTLQRPDMVEAGLTALTWLCAIQRPEADHFKP IGSNGFFQRGQAPAHYDQQPIEAQATVLAACAAFESTGDSGWYDEAQHAFYWFLGHNDAGVALYDPRTGGCADGLEIDRI NQNQGAESTLAFLIGRLTMQTITPPIRRGTAENTSASVTRPPRIRADLIPPRDPNPSRPL
Sequences:
>Translated_780_residues MPTPIRSILIIGNYAPRQCGIATYTTDLRMALLDAYPQSRIDVMAMNDTPAGYDYPDSVVFTIDQDDPYAYYQAADFIRL SSYDLVCIQHEYGIFGGASGRNLLLLIRAITIPIVTTLHTVLREPTADQHTILWELAQRSQRIIVMSSHAVDLMHTIYGI PLAQIDCIPHGIPDLPFRDGYEDKQHANLIGKQVLLTFGLLSPNKGIEDVLHALPLLIKQHPHVLYLIVGATHPTVRQTF GEAYREMLQALVEQLGIQAHVRFHDQFVSSSALAIYMGAADIYITPYHTQEQSVSGTLAYAIGAGKAIVSTPYWYATELL AHGGGMLVPFHDPALLAEQVNTLLAEPQLRQTIRERAYQRGRTMLWSVVATHYMHSFMQARTHPLHPVLVLANQPIKSDS PIIPPLCLDHLIAMTDDMGLIQHAILNIPNHHEGYATDDNARALIATMLLDPIQEPQAQRLAMRYLAFLWYAFNPATQRF RNFMGANRQWLEATGSEDAHARSIWALGTVLEQSHDPGLCGVAQRLLRFALPAVAQLTHPRPWALALLGFAAYRQRFPGD RTVMASQLHLAEQLLSRFQAAHQPDWEWFDDHLTYDNAVLPHALIVSGQTLQRPDMVEAGLTALTWLCAIQRPEADHFKP IGSNGFFQRGQAPAHYDQQPIEAQATVLAACAAFESTGDSGWYDEAQHAFYWFLGHNDAGVALYDPRTGGCADGLEIDRI NQNQGAESTLAFLIGRLTMQTITPPIRRGTAENTSASVTRPPRIRADLIPPRDPNPSRPL >Mature_779_residues PTPIRSILIIGNYAPRQCGIATYTTDLRMALLDAYPQSRIDVMAMNDTPAGYDYPDSVVFTIDQDDPYAYYQAADFIRLS SYDLVCIQHEYGIFGGASGRNLLLLIRAITIPIVTTLHTVLREPTADQHTILWELAQRSQRIIVMSSHAVDLMHTIYGIP LAQIDCIPHGIPDLPFRDGYEDKQHANLIGKQVLLTFGLLSPNKGIEDVLHALPLLIKQHPHVLYLIVGATHPTVRQTFG EAYREMLQALVEQLGIQAHVRFHDQFVSSSALAIYMGAADIYITPYHTQEQSVSGTLAYAIGAGKAIVSTPYWYATELLA HGGGMLVPFHDPALLAEQVNTLLAEPQLRQTIRERAYQRGRTMLWSVVATHYMHSFMQARTHPLHPVLVLANQPIKSDSP IIPPLCLDHLIAMTDDMGLIQHAILNIPNHHEGYATDDNARALIATMLLDPIQEPQAQRLAMRYLAFLWYAFNPATQRFR NFMGANRQWLEATGSEDAHARSIWALGTVLEQSHDPGLCGVAQRLLRFALPAVAQLTHPRPWALALLGFAAYRQRFPGDR TVMASQLHLAEQLLSRFQAAHQPDWEWFDDHLTYDNAVLPHALIVSGQTLQRPDMVEAGLTALTWLCAIQRPEADHFKPI GSNGFFQRGQAPAHYDQQPIEAQATVLAACAAFESTGDSGWYDEAQHAFYWFLGHNDAGVALYDPRTGGCADGLEIDRIN QNQGAESTLAFLIGRLTMQTITPPIRRGTAENTSASVTRPPRIRADLIPPRDPNPSRPL
Specific function: Catalyzes the addition of a mannose residue from GDP-D- mannose to the position 2 of a phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Contrary to pimB, the mannosyltransferase pim
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: =2.4.1.57 [H]
Molecular weight: Translated: 86885; Mature: 86754
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTPIRSILIIGNYAPRQCGIATYTTDLRMALLDAYPQSRIDVMAMNDTPAGYDYPDSVV CCCCCCEEEEEECCCCCCCCCEEEHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEE FTIDQDDPYAYYQAADFIRLSSYDLVCIQHEYGIFGGASGRNLLLLIRAITIPIVTTLHT EEEECCCCEEHHHHHCEEEECCCCEEEEEECCCCEECCCCCCHHHHHHHHHHHHHHHHHH VLREPTADQHTILWELAQRSQRIIVMSSHAVDLMHTIYGIPLAQIDCIPHGIPDLPFRDG HHCCCCCCHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCHHHEECCCCCCCCCCCCCC YEDKQHANLIGKQVLLTFGLLSPNKGIEDVLHALPLLIKQHPHVLYLIVGATHPTVRQTF CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHH GEAYREMLQALVEQLGIQAHVRFHDQFVSSSALAIYMGAADIYITPYHTQEQSVSGTLAY HHHHHHHHHHHHHHHCCEEEEEHHHHHHCCCCEEEEEECCEEEEECCCCCCCCCCCEEEE AIGAGKAIVSTPYWYATELLAHGGGMLVPFHDPALLAEQVNTLLAEPQLRQTIRERAYQR EECCCCCEECCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH GRTMLWSVVATHYMHSFMQARTHPLHPVLVLANQPIKSDSPIIPPLCLDHLIAMTDDMGL CHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCHHH IQHAILNIPNHHEGYATDDNARALIATMLLDPIQEPQAQRLAMRYLAFLWYAFNPATQRF HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHH RNFMGANRQWLEATGSEDAHARSIWALGTVLEQSHDPGLCGVAQRLLRFALPAVAQLTHP HHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC RPWALALLGFAAYRQRFPGDRTVMASQLHLAEQLLSRFQAAHQPDWEWFDDHLTYDNAVL CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCC PHALIVSGQTLQRPDMVEAGLTALTWLCAIQRPEADHFKPIGSNGFFQRGQAPAHYDQQP CHHEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC IEAQATVLAACAAFESTGDSGWYDEAQHAFYWFLGHNDAGVALYDPRTGGCADGLEIDRI HHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCEEECC NQNQGAESTLAFLIGRLTMQTITPPIRRGTAENTSASVTRPPRIRADLIPPRDPNPSRPL CCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PTPIRSILIIGNYAPRQCGIATYTTDLRMALLDAYPQSRIDVMAMNDTPAGYDYPDSVV CCCCCEEEEEECCCCCCCCCEEEHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEE FTIDQDDPYAYYQAADFIRLSSYDLVCIQHEYGIFGGASGRNLLLLIRAITIPIVTTLHT EEEECCCCEEHHHHHCEEEECCCCEEEEEECCCCEECCCCCCHHHHHHHHHHHHHHHHHH VLREPTADQHTILWELAQRSQRIIVMSSHAVDLMHTIYGIPLAQIDCIPHGIPDLPFRDG HHCCCCCCHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCHHHEECCCCCCCCCCCCCC YEDKQHANLIGKQVLLTFGLLSPNKGIEDVLHALPLLIKQHPHVLYLIVGATHPTVRQTF CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHH GEAYREMLQALVEQLGIQAHVRFHDQFVSSSALAIYMGAADIYITPYHTQEQSVSGTLAY HHHHHHHHHHHHHHHCCEEEEEHHHHHHCCCCEEEEEECCEEEEECCCCCCCCCCCEEEE AIGAGKAIVSTPYWYATELLAHGGGMLVPFHDPALLAEQVNTLLAEPQLRQTIRERAYQR EECCCCCEECCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH GRTMLWSVVATHYMHSFMQARTHPLHPVLVLANQPIKSDSPIIPPLCLDHLIAMTDDMGL CHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCHHH IQHAILNIPNHHEGYATDDNARALIATMLLDPIQEPQAQRLAMRYLAFLWYAFNPATQRF HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHH RNFMGANRQWLEATGSEDAHARSIWALGTVLEQSHDPGLCGVAQRLLRFALPAVAQLTHP HHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC RPWALALLGFAAYRQRFPGDRTVMASQLHLAEQLLSRFQAAHQPDWEWFDDHLTYDNAVL CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCC PHALIVSGQTLQRPDMVEAGLTALTWLCAIQRPEADHFKPIGSNGFFQRGQAPAHYDQQP CHHEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC IEAQATVLAACAAFESTGDSGWYDEAQHAFYWFLGHNDAGVALYDPRTGGCADGLEIDRI HHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCEEECC NQNQGAESTLAFLIGRLTMQTITPPIRRGTAENTSASVTRPPRIRADLIPPRDPNPSRPL CCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12068013 [H]