Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is pimA [H]

Identifier: 159896817

GI number: 159896817

Start: 331065

End: 333407

Strand: Direct

Name: pimA [H]

Synonym: Haur_0284

Alternate gene names: 159896817

Gene position: 331065-333407 (Clockwise)

Preceding gene: 159896816

Following gene: 159896818

Centisome position: 5.22

GC content: 52.37

Gene sequence:

>2343_bases
ATGCCGACACCGATTCGCTCAATCTTAATCATTGGAAATTATGCTCCGCGCCAGTGTGGCATAGCAACCTATACCACCGA
TTTACGCATGGCCTTGCTTGACGCGTATCCGCAGAGCAGGATCGACGTGATGGCCATGAATGATACTCCCGCAGGCTATG
ACTACCCCGATTCAGTCGTCTTTACGATTGATCAGGATGACCCCTATGCCTATTATCAAGCTGCCGATTTTATCCGCTTG
AGTTCGTATGACCTTGTGTGTATTCAGCACGAATATGGGATTTTTGGTGGTGCTTCGGGGCGGAATCTGCTCTTGCTCAT
TCGTGCTATCACGATTCCGATTGTAACCACCTTACACACGGTGTTACGCGAACCAACCGCCGATCAACATACGATTCTGT
GGGAGCTTGCGCAACGATCACAACGGATTATCGTGATGAGTTCGCATGCGGTCGATTTAATGCATACAATCTATGGTATT
CCATTGGCTCAGATTGATTGTATTCCGCATGGCATTCCTGATCTGCCGTTTCGCGATGGCTATGAGGATAAACAACACGC
GAATCTGATTGGGAAGCAGGTTTTGCTTACCTTCGGCTTGCTTTCGCCAAATAAAGGGATTGAAGATGTCTTACATGCGT
TGCCATTGCTGATCAAACAGCATCCGCATGTGCTGTATCTGATTGTTGGCGCAACCCATCCAACCGTTCGTCAAACCTTT
GGCGAGGCCTATCGGGAGATGCTTCAGGCCTTAGTCGAGCAACTTGGAATTCAAGCGCATGTGCGGTTTCACGACCAATT
TGTGAGTTCCAGCGCTTTAGCAATTTATATGGGTGCGGCTGATATTTATATTACGCCCTATCATACCCAAGAACAAAGCG
TCTCGGGTACTTTAGCCTATGCGATTGGGGCAGGCAAGGCGATTGTCTCGACACCCTATTGGTATGCAACCGAACTCTTG
GCCCATGGTGGTGGCATGCTGGTTCCGTTTCATGATCCAGCGCTGCTCGCTGAGCAGGTTAACACGCTTTTAGCCGAACC
CCAGCTGCGTCAAACCATCCGCGAACGCGCCTATCAACGCGGGCGCACGATGCTCTGGTCGGTTGTTGCCACGCACTATA
TGCACAGTTTTATGCAGGCACGAACGCACCCCCTCCATCCCGTGCTAGTGCTGGCGAATCAACCAATCAAGTCCGATTCG
CCGATCATCCCGCCGTTATGTCTTGATCATCTGATCGCCATGACTGACGATATGGGCTTGATCCAACATGCGATCTTGAA
TATTCCGAATCATCACGAAGGCTATGCGACCGATGATAATGCGCGAGCCTTGATTGCCACGATGCTGCTCGATCCTATCC
AAGAACCACAGGCCCAGCGCTTGGCAATGCGCTATTTAGCGTTTCTCTGGTATGCCTTTAATCCAGCGACCCAACGGTTT
CGCAACTTTATGGGGGCAAATCGGCAGTGGTTAGAGGCGACAGGCTCGGAAGATGCCCATGCTCGCAGTATCTGGGCACT
TGGCACGGTGCTTGAACAGAGCCATGATCCGGGCTTGTGCGGCGTTGCGCAACGACTCCTCCGTTTTGCGCTTCCAGCGG
TGGCTCAGCTGACTCACCCACGGCCATGGGCCTTAGCATTGTTGGGTTTCGCTGCCTATCGTCAACGCTTTCCTGGTGAT
CGCACGGTTATGGCCAGCCAATTGCACCTCGCTGAACAATTATTGTCCCGCTTTCAAGCGGCGCATCAGCCTGATTGGGA
ATGGTTTGATGATCATCTGACCTATGATAATGCGGTTCTGCCGCATGCATTGATTGTCAGCGGTCAAACCCTTCAGCGCC
CAGATATGGTTGAGGCTGGGTTAACGGCCTTGACCTGGCTCTGTGCGATTCAGCGGCCTGAGGCTGACCATTTCAAGCCC
ATTGGCTCGAATGGGTTTTTCCAGCGTGGGCAAGCTCCAGCCCACTATGATCAACAGCCAATTGAGGCTCAGGCAACCGT
GCTGGCAGCCTGTGCCGCCTTTGAAAGCACAGGCGATTCAGGCTGGTACGATGAAGCCCAGCATGCCTTTTATTGGTTTC
TCGGCCACAACGATGCAGGCGTAGCCCTTTACGACCCGCGCACTGGTGGCTGTGCTGATGGGCTGGAAATTGATCGGATT
AATCAAAATCAGGGGGCTGAATCAACCCTCGCATTTTTAATTGGCCGATTGACGATGCAGACGATCACGCCACCAATCAG
GCGCGGAACAGCGGAAAACACGTCAGCCAGCGTCACCCGACCACCGCGCATTCGAGCGGATTTGATTCCGCCACGTGATC
CCAATCCATCAAGACCATTGTAG

Upstream 100 bases:

>100_bases
ATCAGCTTGATAACCTTTTGCCACGGATTGAAACATTGCGCCACCCACAATATGCCGCTCTGGCAGGGTGATTGCTTCCC
GTTAGTATAGGAGGTGTGGC

Downstream 100 bases:

>100_bases
TGTCTCTTGGCGAGGCAGTCTGGAATACATGATGATGCAACCTAATCGACTCGATCTCTTCGCACGCCATCCAGCCAACC
CGATTTTACAAGCAAGCGAT

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: Alpha-mannosyltransferase; Guanosine diphosphomannose-phosphatidyl-inositol alpha-mannosyltransferase; Phosphatidylinositol alpha-mannosyltransferase; PI alpha-mannosyltransferase [H]

Number of amino acids: Translated: 780; Mature: 779

Protein sequence:

>780_residues
MPTPIRSILIIGNYAPRQCGIATYTTDLRMALLDAYPQSRIDVMAMNDTPAGYDYPDSVVFTIDQDDPYAYYQAADFIRL
SSYDLVCIQHEYGIFGGASGRNLLLLIRAITIPIVTTLHTVLREPTADQHTILWELAQRSQRIIVMSSHAVDLMHTIYGI
PLAQIDCIPHGIPDLPFRDGYEDKQHANLIGKQVLLTFGLLSPNKGIEDVLHALPLLIKQHPHVLYLIVGATHPTVRQTF
GEAYREMLQALVEQLGIQAHVRFHDQFVSSSALAIYMGAADIYITPYHTQEQSVSGTLAYAIGAGKAIVSTPYWYATELL
AHGGGMLVPFHDPALLAEQVNTLLAEPQLRQTIRERAYQRGRTMLWSVVATHYMHSFMQARTHPLHPVLVLANQPIKSDS
PIIPPLCLDHLIAMTDDMGLIQHAILNIPNHHEGYATDDNARALIATMLLDPIQEPQAQRLAMRYLAFLWYAFNPATQRF
RNFMGANRQWLEATGSEDAHARSIWALGTVLEQSHDPGLCGVAQRLLRFALPAVAQLTHPRPWALALLGFAAYRQRFPGD
RTVMASQLHLAEQLLSRFQAAHQPDWEWFDDHLTYDNAVLPHALIVSGQTLQRPDMVEAGLTALTWLCAIQRPEADHFKP
IGSNGFFQRGQAPAHYDQQPIEAQATVLAACAAFESTGDSGWYDEAQHAFYWFLGHNDAGVALYDPRTGGCADGLEIDRI
NQNQGAESTLAFLIGRLTMQTITPPIRRGTAENTSASVTRPPRIRADLIPPRDPNPSRPL

Sequences:

>Translated_780_residues
MPTPIRSILIIGNYAPRQCGIATYTTDLRMALLDAYPQSRIDVMAMNDTPAGYDYPDSVVFTIDQDDPYAYYQAADFIRL
SSYDLVCIQHEYGIFGGASGRNLLLLIRAITIPIVTTLHTVLREPTADQHTILWELAQRSQRIIVMSSHAVDLMHTIYGI
PLAQIDCIPHGIPDLPFRDGYEDKQHANLIGKQVLLTFGLLSPNKGIEDVLHALPLLIKQHPHVLYLIVGATHPTVRQTF
GEAYREMLQALVEQLGIQAHVRFHDQFVSSSALAIYMGAADIYITPYHTQEQSVSGTLAYAIGAGKAIVSTPYWYATELL
AHGGGMLVPFHDPALLAEQVNTLLAEPQLRQTIRERAYQRGRTMLWSVVATHYMHSFMQARTHPLHPVLVLANQPIKSDS
PIIPPLCLDHLIAMTDDMGLIQHAILNIPNHHEGYATDDNARALIATMLLDPIQEPQAQRLAMRYLAFLWYAFNPATQRF
RNFMGANRQWLEATGSEDAHARSIWALGTVLEQSHDPGLCGVAQRLLRFALPAVAQLTHPRPWALALLGFAAYRQRFPGD
RTVMASQLHLAEQLLSRFQAAHQPDWEWFDDHLTYDNAVLPHALIVSGQTLQRPDMVEAGLTALTWLCAIQRPEADHFKP
IGSNGFFQRGQAPAHYDQQPIEAQATVLAACAAFESTGDSGWYDEAQHAFYWFLGHNDAGVALYDPRTGGCADGLEIDRI
NQNQGAESTLAFLIGRLTMQTITPPIRRGTAENTSASVTRPPRIRADLIPPRDPNPSRPL
>Mature_779_residues
PTPIRSILIIGNYAPRQCGIATYTTDLRMALLDAYPQSRIDVMAMNDTPAGYDYPDSVVFTIDQDDPYAYYQAADFIRLS
SYDLVCIQHEYGIFGGASGRNLLLLIRAITIPIVTTLHTVLREPTADQHTILWELAQRSQRIIVMSSHAVDLMHTIYGIP
LAQIDCIPHGIPDLPFRDGYEDKQHANLIGKQVLLTFGLLSPNKGIEDVLHALPLLIKQHPHVLYLIVGATHPTVRQTFG
EAYREMLQALVEQLGIQAHVRFHDQFVSSSALAIYMGAADIYITPYHTQEQSVSGTLAYAIGAGKAIVSTPYWYATELLA
HGGGMLVPFHDPALLAEQVNTLLAEPQLRQTIRERAYQRGRTMLWSVVATHYMHSFMQARTHPLHPVLVLANQPIKSDSP
IIPPLCLDHLIAMTDDMGLIQHAILNIPNHHEGYATDDNARALIATMLLDPIQEPQAQRLAMRYLAFLWYAFNPATQRFR
NFMGANRQWLEATGSEDAHARSIWALGTVLEQSHDPGLCGVAQRLLRFALPAVAQLTHPRPWALALLGFAAYRQRFPGDR
TVMASQLHLAEQLLSRFQAAHQPDWEWFDDHLTYDNAVLPHALIVSGQTLQRPDMVEAGLTALTWLCAIQRPEADHFKPI
GSNGFFQRGQAPAHYDQQPIEAQATVLAACAAFESTGDSGWYDEAQHAFYWFLGHNDAGVALYDPRTGGCADGLEIDRIN
QNQGAESTLAFLIGRLTMQTITPPIRRGTAENTSASVTRPPRIRADLIPPRDPNPSRPL

Specific function: Catalyzes the addition of a mannose residue from GDP-D- mannose to the position 2 of a phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Contrary to pimB, the mannosyltransferase pim

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: =2.4.1.57 [H]

Molecular weight: Translated: 86885; Mature: 86754

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTPIRSILIIGNYAPRQCGIATYTTDLRMALLDAYPQSRIDVMAMNDTPAGYDYPDSVV
CCCCCCEEEEEECCCCCCCCCEEEHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEE
FTIDQDDPYAYYQAADFIRLSSYDLVCIQHEYGIFGGASGRNLLLLIRAITIPIVTTLHT
EEEECCCCEEHHHHHCEEEECCCCEEEEEECCCCEECCCCCCHHHHHHHHHHHHHHHHHH
VLREPTADQHTILWELAQRSQRIIVMSSHAVDLMHTIYGIPLAQIDCIPHGIPDLPFRDG
HHCCCCCCHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCHHHEECCCCCCCCCCCCCC
YEDKQHANLIGKQVLLTFGLLSPNKGIEDVLHALPLLIKQHPHVLYLIVGATHPTVRQTF
CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHH
GEAYREMLQALVEQLGIQAHVRFHDQFVSSSALAIYMGAADIYITPYHTQEQSVSGTLAY
HHHHHHHHHHHHHHHCCEEEEEHHHHHHCCCCEEEEEECCEEEEECCCCCCCCCCCEEEE
AIGAGKAIVSTPYWYATELLAHGGGMLVPFHDPALLAEQVNTLLAEPQLRQTIRERAYQR
EECCCCCEECCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
GRTMLWSVVATHYMHSFMQARTHPLHPVLVLANQPIKSDSPIIPPLCLDHLIAMTDDMGL
CHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCHHH
IQHAILNIPNHHEGYATDDNARALIATMLLDPIQEPQAQRLAMRYLAFLWYAFNPATQRF
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHH
RNFMGANRQWLEATGSEDAHARSIWALGTVLEQSHDPGLCGVAQRLLRFALPAVAQLTHP
HHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC
RPWALALLGFAAYRQRFPGDRTVMASQLHLAEQLLSRFQAAHQPDWEWFDDHLTYDNAVL
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCC
PHALIVSGQTLQRPDMVEAGLTALTWLCAIQRPEADHFKPIGSNGFFQRGQAPAHYDQQP
CHHEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
IEAQATVLAACAAFESTGDSGWYDEAQHAFYWFLGHNDAGVALYDPRTGGCADGLEIDRI
HHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCEEECC
NQNQGAESTLAFLIGRLTMQTITPPIRRGTAENTSASVTRPPRIRADLIPPRDPNPSRPL
CCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PTPIRSILIIGNYAPRQCGIATYTTDLRMALLDAYPQSRIDVMAMNDTPAGYDYPDSVV
CCCCCEEEEEECCCCCCCCCEEEHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEE
FTIDQDDPYAYYQAADFIRLSSYDLVCIQHEYGIFGGASGRNLLLLIRAITIPIVTTLHT
EEEECCCCEEHHHHHCEEEECCCCEEEEEECCCCEECCCCCCHHHHHHHHHHHHHHHHHH
VLREPTADQHTILWELAQRSQRIIVMSSHAVDLMHTIYGIPLAQIDCIPHGIPDLPFRDG
HHCCCCCCHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCHHHEECCCCCCCCCCCCCC
YEDKQHANLIGKQVLLTFGLLSPNKGIEDVLHALPLLIKQHPHVLYLIVGATHPTVRQTF
CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHH
GEAYREMLQALVEQLGIQAHVRFHDQFVSSSALAIYMGAADIYITPYHTQEQSVSGTLAY
HHHHHHHHHHHHHHHCCEEEEEHHHHHHCCCCEEEEEECCEEEEECCCCCCCCCCCEEEE
AIGAGKAIVSTPYWYATELLAHGGGMLVPFHDPALLAEQVNTLLAEPQLRQTIRERAYQR
EECCCCCEECCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
GRTMLWSVVATHYMHSFMQARTHPLHPVLVLANQPIKSDSPIIPPLCLDHLIAMTDDMGL
CHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCHHH
IQHAILNIPNHHEGYATDDNARALIATMLLDPIQEPQAQRLAMRYLAFLWYAFNPATQRF
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHH
RNFMGANRQWLEATGSEDAHARSIWALGTVLEQSHDPGLCGVAQRLLRFALPAVAQLTHP
HHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC
RPWALALLGFAAYRQRFPGDRTVMASQLHLAEQLLSRFQAAHQPDWEWFDDHLTYDNAVL
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCC
PHALIVSGQTLQRPDMVEAGLTALTWLCAIQRPEADHFKPIGSNGFFQRGQAPAHYDQQP
CHHEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
IEAQATVLAACAAFESTGDSGWYDEAQHAFYWFLGHNDAGVALYDPRTGGCADGLEIDRI
HHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCEEECC
NQNQGAESTLAFLIGRLTMQTITPPIRRGTAENTSASVTRPPRIRADLIPPRDPNPSRPL
CCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12068013 [H]