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The map label for this gene is ykwD [H]

Identifier: 159896801

GI number: 159896801

Start: 315982

End: 317025

Strand: Reverse

Name: ykwD [H]

Synonym: Haur_0268

Alternate gene names: 159896801

Gene position: 317025-315982 (Counterclockwise)

Preceding gene: 159896803

Following gene: 159896799

Centisome position: 5.0

GC content: 50.86

Gene sequence:

>1044_bases
ATGCGCCTACGTTTTCTATTGATGATGATCTTGGTTATCGGCAGTTTGAGTTTTAGCCCCAAACCTGCTGCTGCCCAAAC
CAGCCTGTGTTTTGCCGATGTGCCAGGCATTAGCAATTGTATTAGTGGGCGTTTTTTGAGCTATTGGCAACAAAATGGTG
GTTTGGCAGTGTTTGGCTATCCTCTCTCGCCTGCTCAAAGCGAAACAACTGCTAATGGCACATTTACAACTCAATATTTT
GAACGCCAACGCTTTGAGCTACACCCTGAATTGGCCGCGCCCTATGATGTGCTGCTTGGCCGTTTGGGAGCCGAAATCTA
CGAACGCAACCACGGCAACTGGCGCAATGCTCCCAAAACCAACCCAAGCACCCAAGGCTGTTTAGTATTTAACGAAACTG
GGCGCTCAGTTTGCGAACCATTTTTGAGCTATTGGCTGAATCATGGCTTGCTTGATGGCTCGTTGAATGCCTATGAACAG
TCGTTGAGTTTGCTAGGCTTGCCGCTGACCGAGCCACTCCTCGAACAAAACCCCGATGGCGATTGGGTGATGACTCAGTG
GTTTGAACGCGCTCGGCTGGAAGATCATGGCGCAAAAGGTGTGCTGCTTGGCCGTTTGGGAGCCGAACTCAAAGCCCAGC
CCACCCCCAGCTATCCGAGCGAAATCACAGCCTTGGTTGATGCGATCAATCGTCAACGCAACCAAGCTGGATTAAGCAGC
TTGACGATCAACCCAACCCTCAACCAAGCTGCCCAAATTCATAGCGACGATATGGCTCGCAACAACTTTTTCGAGCACAC
TGGCAGCGATGGCTCGAACGCAGGCCAGCGCATGCAACGGGTAGGCTACTCATGGCGAGCTTGGGCCGAAAATTTAGCGG
CTGGCTATACCGATGCTCAAGCAATTATCGATGCTTGGATGCAAAGTCCAGGTCATCGCGCCAACATTCTATATGCCGAT
GTCAGCGAAATTGGGGTTGGGATCGCCCGTAATCCCAATTCAGAATACCAAATTTATTGGACAGTCAACTTTGGAGCACG
CTAG

Upstream 100 bases:

>100_bases
TTTGTGCTAGCCGCTTTTAGCCAGAAAGTACCGCGTTGATTCAGGCCAGGCCTCGGTACAATAAAGCTACTGACGGCGAC
CTTCGCACCAAGGAGCACCT

Downstream 100 bases:

>100_bases
ACCTGCTCAATTTGCACCACCCGATCACGGGCAGCTAAATCGCGTACAAGTTGAATCTTGGCCTGCGGAAAACTGGCTTG
CGCAAGGGCAATAACCTCTG

Product: SCP-like extracellular protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MRLRFLLMMILVIGSLSFSPKPAAAQTSLCFADVPGISNCISGRFLSYWQQNGGLAVFGYPLSPAQSETTANGTFTTQYF
ERQRFELHPELAAPYDVLLGRLGAEIYERNHGNWRNAPKTNPSTQGCLVFNETGRSVCEPFLSYWLNHGLLDGSLNAYEQ
SLSLLGLPLTEPLLEQNPDGDWVMTQWFERARLEDHGAKGVLLGRLGAELKAQPTPSYPSEITALVDAINRQRNQAGLSS
LTINPTLNQAAQIHSDDMARNNFFEHTGSDGSNAGQRMQRVGYSWRAWAENLAAGYTDAQAIIDAWMQSPGHRANILYAD
VSEIGVGIARNPNSEYQIYWTVNFGAR

Sequences:

>Translated_347_residues
MRLRFLLMMILVIGSLSFSPKPAAAQTSLCFADVPGISNCISGRFLSYWQQNGGLAVFGYPLSPAQSETTANGTFTTQYF
ERQRFELHPELAAPYDVLLGRLGAEIYERNHGNWRNAPKTNPSTQGCLVFNETGRSVCEPFLSYWLNHGLLDGSLNAYEQ
SLSLLGLPLTEPLLEQNPDGDWVMTQWFERARLEDHGAKGVLLGRLGAELKAQPTPSYPSEITALVDAINRQRNQAGLSS
LTINPTLNQAAQIHSDDMARNNFFEHTGSDGSNAGQRMQRVGYSWRAWAENLAAGYTDAQAIIDAWMQSPGHRANILYAD
VSEIGVGIARNPNSEYQIYWTVNFGAR
>Mature_347_residues
MRLRFLLMMILVIGSLSFSPKPAAAQTSLCFADVPGISNCISGRFLSYWQQNGGLAVFGYPLSPAQSETTANGTFTTQYF
ERQRFELHPELAAPYDVLLGRLGAEIYERNHGNWRNAPKTNPSTQGCLVFNETGRSVCEPFLSYWLNHGLLDGSLNAYEQ
SLSLLGLPLTEPLLEQNPDGDWVMTQWFERARLEDHGAKGVLLGRLGAELKAQPTPSYPSEITALVDAINRQRNQAGLSS
LTINPTLNQAAQIHSDDMARNNFFEHTGSDGSNAGQRMQRVGYSWRAWAENLAAGYTDAQAIIDAWMQSPGHRANILYAD
VSEIGVGIARNPNSEYQIYWTVNFGAR

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SCP domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014044
- InterPro:   IPR014258 [H]

Pfam domain/function: PF00188 SCP [H]

EC number: NA

Molecular weight: Translated: 38440; Mature: 38440

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLRFLLMMILVIGSLSFSPKPAAAQTSLCFADVPGISNCISGRFLSYWQQNGGLAVFGY
CHHHHHHHHHHHHHCCCCCCCCCCHHHCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEC
PLSPAQSETTANGTFTTQYFERQRFELHPELAAPYDVLLGRLGAEIYERNHGNWRNAPKT
CCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
NPSTQGCLVFNETGRSVCEPFLSYWLNHGLLDGSLNAYEQSLSLLGLPLTEPLLEQNPDG
CCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHCCCCC
DWVMTQWFERARLEDHGAKGVLLGRLGAELKAQPTPSYPSEITALVDAINRQRNQAGLSS
CCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCE
LTINPTLNQAAQIHSDDMARNNFFEHTGSDGSNAGQRMQRVGYSWRAWAENLAAGYTDAQ
EEECCCHHHHHHHCCHHHHHCCCHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCHHH
AIIDAWMQSPGHRANILYADVSEIGVGIARNPNSEYQIYWTVNFGAR
HHHHHHHHCCCCCCEEEEEEHHHHCCEEECCCCCCEEEEEEEECCCC
>Mature Secondary Structure
MRLRFLLMMILVIGSLSFSPKPAAAQTSLCFADVPGISNCISGRFLSYWQQNGGLAVFGY
CHHHHHHHHHHHHHCCCCCCCCCCHHHCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEC
PLSPAQSETTANGTFTTQYFERQRFELHPELAAPYDVLLGRLGAEIYERNHGNWRNAPKT
CCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
NPSTQGCLVFNETGRSVCEPFLSYWLNHGLLDGSLNAYEQSLSLLGLPLTEPLLEQNPDG
CCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHCCCCC
DWVMTQWFERARLEDHGAKGVLLGRLGAELKAQPTPSYPSEITALVDAINRQRNQAGLSS
CCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCE
LTINPTLNQAAQIHSDDMARNNFFEHTGSDGSNAGQRMQRVGYSWRAWAENLAAGYTDAQ
EEECCCHHHHHHHCCHHHHHCCCHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCHHH
AIIDAWMQSPGHRANILYADVSEIGVGIARNPNSEYQIYWTVNFGAR
HHHHHHHHCCCCCCEEEEEEHHHHCCEEECCCCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]