| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is sbpA [H]
Identifier: 159896792
GI number: 159896792
Start: 302771
End: 303808
Strand: Reverse
Name: sbpA [H]
Synonym: Haur_0259
Alternate gene names: 159896792
Gene position: 303808-302771 (Counterclockwise)
Preceding gene: 159896793
Following gene: 159896791
Centisome position: 4.79
GC content: 48.75
Gene sequence:
>1038_bases ATGAAACGCTTGCATTTCAGTTTATTAAGCTTGTTATTGGTCGGATTATTGGCTGCTTGTGGCGAGGCCAGCCAAACTAC CACCAGCAATGCCACGGTTACCACCATCACCTTGGGCGCGTACACCACGCCACGCGAAGCCTATGCCAAGTTGATTCCGC TGTTTCAAGCCAAATGGAAGGCCGATACTGGCGGTGAAGTCAAATTTGAAGAATCATATCAAGGTTCAGGTGCGCAATCA CGGGCAATCGTTGAAGGCTTCGAGGCTGATATCGCGGCGCTTTCGCTCGAAGCTGATATTAATCGGATCACCGATGCAGG CCTGATCACTCACGATTGGAAAGCTGGCACGCATTCGGGCATGGTTAGTACCTCAATTGTGGTGTTTGCGGTACGCGAAG GCAATCCCAAAGGTATTCAAGATTGGGCTGATTTAGCCAAGCCTGGAGTACAAATTTTGACTCCCGATCCACGCACCAGC GGCGGCGCACAATGGAATATTTTAGCGTTGTATGGGGCCGCCAAACGTGGTCAGATTACAGGCGTACCCGCCAACGACGA AGCAGCAGCCCAAGCCTTTTTAGCGAGTGTGCTTAAAAATGTCGTGGTGTTTGATAAGGGTGCGCGTGAAAGTATCACCA ACTTTGAAAAAGGCGTTGGCGATGTGGCAATCACCTATGAAAATGAAATTTTGGTTGGCCAAAAAGGCGGCCAAACCTAT CAAATGGTCATCCCAACTTCCACGATTTTGATCGAAAACCCAATTGCCCTAATCGATAAATCAGTTGAAAAACATGGCAA TCGTCAAGCAGTCGAAGCTTTTATTAACTTCTTGCATAGCCGTGAAGCCCAAGAAGTCTTTGCTGAATTTGGCTTACGCT CGGTCGATGCCGATGTTGCCAAAGCCACTGCTGAGCGCTATCCCGCCATCAACGATTTGTTTACAATCAACGAATTTGGT GGTTGGAGCAAAGCCACGCCTGAATACTTTGGCGATGACGGTGTCTATGCCAAAGTGCTAGCGCAGGTACAACAATGA
Upstream 100 bases:
>100_bases CGTTGTTGAGCCAAATCAGCGTGCCAGTGTTAATTATTCGTTCTAGTTATCTTCAGCCAATGCCTGAACGGCTGGCTTTG AATGTTTTGGAGACAGTGGC
Downstream 100 bases:
>100_bases CGACTCAAACAATTGAACGCACGGCCCCACGTTTACCGTGGGGCCGTTGGAGTATCCGTGGCGCTGCCTTAACCTATTTG GCAGTGTTTTTGGTATTGCC
Product: sulfate ABC transporter periplasmic sulfate-binding protein
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MKRLHFSLLSLLLVGLLAACGEASQTTTSNATVTTITLGAYTTPREAYAKLIPLFQAKWKADTGGEVKFEESYQGSGAQS RAIVEGFEADIAALSLEADINRITDAGLITHDWKAGTHSGMVSTSIVVFAVREGNPKGIQDWADLAKPGVQILTPDPRTS GGAQWNILALYGAAKRGQITGVPANDEAAAQAFLASVLKNVVVFDKGARESITNFEKGVGDVAITYENEILVGQKGGQTY QMVIPTSTILIENPIALIDKSVEKHGNRQAVEAFINFLHSREAQEVFAEFGLRSVDADVAKATAERYPAINDLFTINEFG GWSKATPEYFGDDGVYAKVLAQVQQ
Sequences:
>Translated_345_residues MKRLHFSLLSLLLVGLLAACGEASQTTTSNATVTTITLGAYTTPREAYAKLIPLFQAKWKADTGGEVKFEESYQGSGAQS RAIVEGFEADIAALSLEADINRITDAGLITHDWKAGTHSGMVSTSIVVFAVREGNPKGIQDWADLAKPGVQILTPDPRTS GGAQWNILALYGAAKRGQITGVPANDEAAAQAFLASVLKNVVVFDKGARESITNFEKGVGDVAITYENEILVGQKGGQTY QMVIPTSTILIENPIALIDKSVEKHGNRQAVEAFINFLHSREAQEVFAEFGLRSVDADVAKATAERYPAINDLFTINEFG GWSKATPEYFGDDGVYAKVLAQVQQ >Mature_345_residues MKRLHFSLLSLLLVGLLAACGEASQTTTSNATVTTITLGAYTTPREAYAKLIPLFQAKWKADTGGEVKFEESYQGSGAQS RAIVEGFEADIAALSLEADINRITDAGLITHDWKAGTHSGMVSTSIVVFAVREGNPKGIQDWADLAKPGVQILTPDPRTS GGAQWNILALYGAAKRGQITGVPANDEAAAQAFLASVLKNVVVFDKGARESITNFEKGVGDVAITYENEILVGQKGGQTY QMVIPTSTILIENPIALIDKSVEKHGNRQAVEAFINFLHSREAQEVFAEFGLRSVDADVAKATAERYPAINDLFTINEFG GWSKATPEYFGDDGVYAKVLAQVQQ
Specific function: This protein specifically binds sulfate and is involved in its transmembrane transport [H]
COG id: COG1613
COG function: function code P; ABC-type sulfate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic sulfate-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1790351, Length=305, Percent_Identity=41.6393442622951, Blast_Score=238, Evalue=5e-64, Organism=Escherichia coli, GI1788765, Length=315, Percent_Identity=34.2857142857143, Blast_Score=194, Evalue=7e-51,
Paralogues:
None
Copy number: 1240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 - InterPro: IPR000957 - InterPro: IPR006311 - InterPro: IPR005669 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 37030; Mature: 37030
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLHFSLLSLLLVGLLAACGEASQTTTSNATVTTITLGAYTTPREAYAKLIPLFQAKWK CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCC ADTGGEVKFEESYQGSGAQSRAIVEGFEADIAALSLEADINRITDAGLITHDWKAGTHSG CCCCCCEEECCCCCCCCCCCHHHHHHHHCCCEEEEEHHHHHHHCCCCEEEECCCCCCCCC MVSTSIVVFAVREGNPKGIQDWADLAKPGVQILTPDPRTSGGAQWNILALYGAAKRGQIT CEEEEEEEEEEECCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCEEEEEEECCCCCCEEE GVPANDEAAAQAFLASVLKNVVVFDKGARESITNFEKGVGDVAITYENEILVGQKGGQTY CCCCCCHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHCCCCEEEEECCEEEEECCCCCEE QMVIPTSTILIENPIALIDKSVEKHGNRQAVEAFINFLHSREAQEVFAEFGLRSVDADVA EEEECCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHH KATAERYPAINDLFTINEFGGWSKATPEYFGDDGVYAKVLAQVQQ HHHHHHCCCCHHEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure MKRLHFSLLSLLLVGLLAACGEASQTTTSNATVTTITLGAYTTPREAYAKLIPLFQAKWK CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCC ADTGGEVKFEESYQGSGAQSRAIVEGFEADIAALSLEADINRITDAGLITHDWKAGTHSG CCCCCCEEECCCCCCCCCCCHHHHHHHHCCCEEEEEHHHHHHHCCCCEEEECCCCCCCCC MVSTSIVVFAVREGNPKGIQDWADLAKPGVQILTPDPRTSGGAQWNILALYGAAKRGQIT CEEEEEEEEEEECCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCEEEEEEECCCCCCEEE GVPANDEAAAQAFLASVLKNVVVFDKGARESITNFEKGVGDVAITYENEILVGQKGGQTY CCCCCCHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHCCCCEEEEECCEEEEECCCCCEE QMVIPTSTILIENPIALIDKSVEKHGNRQAVEAFINFLHSREAQEVFAEFGLRSVDADVA EEEECCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHH KATAERYPAINDLFTINEFGGWSKATPEYFGDDGVYAKVLAQVQQ HHHHHHCCCCHHEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1708375 [H]