| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is cysW [H]
Identifier: 159896791
GI number: 159896791
Start: 301935
End: 302774
Strand: Reverse
Name: cysW [H]
Synonym: Haur_0258
Alternate gene names: 159896791
Gene position: 302774-301935 (Counterclockwise)
Preceding gene: 159896792
Following gene: 159896790
Centisome position: 4.77
GC content: 53.33
Gene sequence:
>840_bases ATGACGACTCAAACAATTGAACGCACGGCCCCACGTTTACCGTGGGGCCGTTGGAGTATCCGTGGCGCTGCCTTAACCTA TTTGGCAGTGTTTTTGGTATTGCCGTTAATTGTAGTCGTCGTCGATGGATTGGGCGCTGGCGTTGAATCGATCGTCAGCG TGGTTAGCTCGCCAATTGCCCGCCACGCAATTTGGTTGACGATTTGGACTGGCCTCGTGATGTCGTTGATCAATGCAGTA ATGGGCTTATTGACAGCATTCGTTTTGGTGCGTTATGAGTTTCCGGGCAAAACCTTATTGAATGCAGTCGTTGATTTGCC GTTTGCTATCCCCACCTTGGTCACGGGCGTGATGCTGGTGATTTTGTATGGGCCACAAGCGGCAATCGGCGGCTGGCTCA ATCAACAGTTGGGTTGGCAAGTGATTTTTGCGCCCTCTGGCATCATTTTGGCCTTGCTGTTTACCTCATTTCCATTCGTG GTGCGCTCGGTTCAGCCAGTCTTGATCAACCTTGATCGTTCGAGCGAAGAGGCAGCGGCAACGCTTGGCGCACCTGCTTG GCAAATTTTTTGGCGCGTGACTCTGCCAGCCTTGTTGCCAGCCTTGGTTTCGGGCACATTGCTGAGTTTTGCGCGAGCCA TTGGCGAATTTGGTGCGATTGTCGTGGTTGCTGGCAATATTCCGCTGCGCTCACAAACTGCCGCTGTCTATGTTTATGGC GAGATTGAATCGGGCAGCCAACGCGATGCTAGCGCGATGTCGTTGGTGATGTTGGCAATTGCGCTTGGCACGATGAGCTT GGTCGATTGGCTCAGTCGGCGGCGGGAGGTGCAAGCATGA
Upstream 100 bases:
>100_bases ATTTGTTTACAATCAACGAATTTGGTGGTTGGAGCAAAGCCACGCCTGAATACTTTGGCGATGACGGTGTCTATGCCAAA GTGCTAGCGCAGGTACAACA
Downstream 100 bases:
>100_bases ATTGGCGCAAATGGCTGTTGATCAGCATTGTCGTAGGCTACATGGGCATTTTGATCATCGCCCCGCTGGGTGCAATTGTG TTTGGTGCGTTTCGCGAAGG
Product: sulfate ABC transporter inner membrane subunit
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MTTQTIERTAPRLPWGRWSIRGAALTYLAVFLVLPLIVVVVDGLGAGVESIVSVVSSPIARHAIWLTIWTGLVMSLINAV MGLLTAFVLVRYEFPGKTLLNAVVDLPFAIPTLVTGVMLVILYGPQAAIGGWLNQQLGWQVIFAPSGIILALLFTSFPFV VRSVQPVLINLDRSSEEAAATLGAPAWQIFWRVTLPALLPALVSGTLLSFARAIGEFGAIVVVAGNIPLRSQTAAVYVYG EIESGSQRDASAMSLVMLAIALGTMSLVDWLSRRREVQA
Sequences:
>Translated_279_residues MTTQTIERTAPRLPWGRWSIRGAALTYLAVFLVLPLIVVVVDGLGAGVESIVSVVSSPIARHAIWLTIWTGLVMSLINAV MGLLTAFVLVRYEFPGKTLLNAVVDLPFAIPTLVTGVMLVILYGPQAAIGGWLNQQLGWQVIFAPSGIILALLFTSFPFV VRSVQPVLINLDRSSEEAAATLGAPAWQIFWRVTLPALLPALVSGTLLSFARAIGEFGAIVVVAGNIPLRSQTAAVYVYG EIESGSQRDASAMSLVMLAIALGTMSLVDWLSRRREVQA >Mature_278_residues TTQTIERTAPRLPWGRWSIRGAALTYLAVFLVLPLIVVVVDGLGAGVESIVSVVSSPIARHAIWLTIWTGLVMSLINAVM GLLTAFVLVRYEFPGKTLLNAVVDLPFAIPTLVTGVMLVILYGPQAAIGGWLNQQLGWQVIFAPSGIILALLFTSFPFVV RSVQPVLINLDRSSEEAAATLGAPAWQIFWRVTLPALLPALVSGTLLSFARAIGEFGAIVVVAGNIPLRSQTAAVYVYGE IESGSQRDASAMSLVMLAIALGTMSLVDWLSRRREVQA
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0555
COG function: function code O; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=282, Percent_Identity=35.1063829787234, Blast_Score=172, Evalue=2e-44, Organism=Escherichia coli, GI1788764, Length=222, Percent_Identity=43.2432432432432, Blast_Score=167, Evalue=6e-43, Organism=Escherichia coli, GI1786980, Length=213, Percent_Identity=35.2112676056338, Blast_Score=117, Evalue=7e-28, Organism=Escherichia coli, GI1786254, Length=218, Percent_Identity=25.6880733944954, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1787369, Length=237, Percent_Identity=25.7383966244726, Blast_Score=62, Evalue=4e-11, Organism=Escherichia coli, GI1787368, Length=208, Percent_Identity=27.8846153846154, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011866 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 29923; Mature: 29792
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQTIERTAPRLPWGRWSIRGAALTYLAVFLVLPLIVVVVDGLGAGVESIVSVVSSPIA CCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH RHAIWLTIWTGLVMSLINAVMGLLTAFVLVRYEFPGKTLLNAVVDLPFAIPTLVTGVMLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHH ILYGPQAAIGGWLNQQLGWQVIFAPSGIILALLFTSFPFVVRSVQPVLINLDRSSEEAAA HHCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHH TLGAPAWQIFWRVTLPALLPALVSGTLLSFARAIGEFGAIVVVAGNIPLRSQTAAVYVYG HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEE EIESGSQRDASAMSLVMLAIALGTMSLVDWLSRRREVQA ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TTQTIERTAPRLPWGRWSIRGAALTYLAVFLVLPLIVVVVDGLGAGVESIVSVVSSPIA CCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH RHAIWLTIWTGLVMSLINAVMGLLTAFVLVRYEFPGKTLLNAVVDLPFAIPTLVTGVMLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHH ILYGPQAAIGGWLNQQLGWQVIFAPSGIILALLFTSFPFVVRSVQPVLINLDRSSEEAAA HHCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHH TLGAPAWQIFWRVTLPALLPALVSGTLLSFARAIGEFGAIVVVAGNIPLRSQTAAVYVYG HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEE EIESGSQRDASAMSLVMLAIALGTMSLVDWLSRRREVQA ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]