| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is cysW [H]
Identifier: 159896790
GI number: 159896790
Start: 301129
End: 301938
Strand: Reverse
Name: cysW [H]
Synonym: Haur_0257
Alternate gene names: 159896790
Gene position: 301938-301129 (Counterclockwise)
Preceding gene: 159896791
Following gene: 159896788
Centisome position: 4.76
GC content: 50.74
Gene sequence:
>810_bases ATGAATTGGCGCAAATGGCTGTTGATCAGCATTGTCGTAGGCTACATGGGCATTTTGATCATCGCCCCGCTGGGTGCAAT TGTGTTTGGTGCGTTTCGCGAAGGCGCTCCGGCAGTGCTAGAGGCCTTGCAACATCCCCATGTGTTACGCTCATTTGGCC TAACCTTGATCATCTGTTTGGTAGTAGTGTCAATTCATGGCATCTTTGGCACGCTAGTGGCTTGGGTACTGGTGCGTCAT CAATTTGTCGGAAAAGCCTTGGTTAATCGATTGCTCGATTTGCCATTCGCTATGTCGCCAGTGATCGTTGGTTTCACCTT AATTGTGCTGTTTGGGCGTAATGGTGTGCTCAAGCCACTAACCGAGGCGCTTGATTGGCAAATTGCCTTTGCTTTGCCTG GAATGATTTTGGCGACCTTGTTTGTAACCTTGCCGTTTATGGTGCGCGAGTTGATGCCTGTGCTTGAGGCATTTGGGCGC AAACAGGAAGAGGCTGCTGCAACCTTGGGTGCCAGTGGCTGGCAAACCTTCCGCTTAGTCACATTTCCAGCCTTGCGTTG GGCTTTTTTATATGGTTTAGGCCTGACCTGTGCCCGCGCCTTGGGCGAATTTGGGGCGGTGCTGGTGATCAGCGGTGGAA TTCAAGGACGCACCGAAACTGCCACGGTCTACATCTTTCGGGCGCTCGATGATCGCCAATATGCCGGAGCTTATAGTGCA GCCTTGCTACTAGGGGCAATTTCATTAGTCTTAGTATTAGTCATCGATGTGTTTCATCGGCGTTCACAAAAGAGTATAGA GCAACGCTAG
Upstream 100 bases:
>100_bases GCCAACGCGATGCTAGCGCGATGTCGTTGGTGATGTTGGCAATTGCGCTTGGCACGATGAGCTTGGTCGATTGGCTCAGT CGGCGGCGGGAGGTGCAAGC
Downstream 100 bases:
>100_bases GGATTAGAGGTCAGGGATGAGGGGCCAGGTGTAATGGTTTATAACGTTAACAACGCCCAGCATGCCCTCACCCCCAGCCC CTCTCACACGGCGGCGGGCG
Product: sulfate ABC transporter inner membrane subunit
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MNWRKWLLISIVVGYMGILIIAPLGAIVFGAFREGAPAVLEALQHPHVLRSFGLTLIICLVVVSIHGIFGTLVAWVLVRH QFVGKALVNRLLDLPFAMSPVIVGFTLIVLFGRNGVLKPLTEALDWQIAFALPGMILATLFVTLPFMVRELMPVLEAFGR KQEEAAATLGASGWQTFRLVTFPALRWAFLYGLGLTCARALGEFGAVLVISGGIQGRTETATVYIFRALDDRQYAGAYSA ALLLGAISLVLVLVIDVFHRRSQKSIEQR
Sequences:
>Translated_269_residues MNWRKWLLISIVVGYMGILIIAPLGAIVFGAFREGAPAVLEALQHPHVLRSFGLTLIICLVVVSIHGIFGTLVAWVLVRH QFVGKALVNRLLDLPFAMSPVIVGFTLIVLFGRNGVLKPLTEALDWQIAFALPGMILATLFVTLPFMVRELMPVLEAFGR KQEEAAATLGASGWQTFRLVTFPALRWAFLYGLGLTCARALGEFGAVLVISGGIQGRTETATVYIFRALDDRQYAGAYSA ALLLGAISLVLVLVIDVFHRRSQKSIEQR >Mature_269_residues MNWRKWLLISIVVGYMGILIIAPLGAIVFGAFREGAPAVLEALQHPHVLRSFGLTLIICLVVVSIHGIFGTLVAWVLVRH QFVGKALVNRLLDLPFAMSPVIVGFTLIVLFGRNGVLKPLTEALDWQIAFALPGMILATLFVTLPFMVRELMPVLEAFGR KQEEAAATLGASGWQTFRLVTFPALRWAFLYGLGLTCARALGEFGAVLVISGGIQGRTETATVYIFRALDDRQYAGAYSA ALLLGAISLVLVLVIDVFHRRSQKSIEQR
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4208
COG function: function code P; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=269, Percent_Identity=42.0074349442379, Blast_Score=210, Evalue=7e-56, Organism=Escherichia coli, GI1788764, Length=221, Percent_Identity=38.4615384615385, Blast_Score=154, Evalue=5e-39, Organism=Escherichia coli, GI1786980, Length=189, Percent_Identity=37.5661375661376, Blast_Score=88, Evalue=7e-19, Organism=Escherichia coli, GI1786254, Length=224, Percent_Identity=30.3571428571429, Blast_Score=69, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011866 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 29445; Mature: 29445
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: PS50928 ABC_TM1 ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWRKWLLISIVVGYMGILIIAPLGAIVFGAFREGAPAVLEALQHPHVLRSFGLTLIICL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHH VVVSIHGIFGTLVAWVLVRHQFVGKALVNRLLDLPFAMSPVIVGFTLIVLFGRNGVLKPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHH TEALDWQIAFALPGMILATLFVTLPFMVRELMPVLEAFGRKQEEAAATLGASGWQTFRLV HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHH TFPALRWAFLYGLGLTCARALGEFGAVLVISGGIQGRTETATVYIFRALDDRQYAGAYSA HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHEEEEEECCCCHHHHHHHH ALLLGAISLVLVLVIDVFHRRSQKSIEQR HHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNWRKWLLISIVVGYMGILIIAPLGAIVFGAFREGAPAVLEALQHPHVLRSFGLTLIICL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHH VVVSIHGIFGTLVAWVLVRHQFVGKALVNRLLDLPFAMSPVIVGFTLIVLFGRNGVLKPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHH TEALDWQIAFALPGMILATLFVTLPFMVRELMPVLEAFGRKQEEAAATLGASGWQTFRLV HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHH TFPALRWAFLYGLGLTCARALGEFGAVLVISGGIQGRTETATVYIFRALDDRQYAGAYSA HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHEEEEEECCCCHHHHHHHH ALLLGAISLVLVLVIDVFHRRSQKSIEQR HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1708375 [H]