| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159896731
Identifier: 159896731
GI number: 159896731
Start: 233469
End: 233819
Strand: Reverse
Name: 159896731
Synonym: Haur_0198
Alternate gene names: NA
Gene position: 233819-233469 (Counterclockwise)
Preceding gene: 159896732
Following gene: 159896730
Centisome position: 3.68
GC content: 53.28
Gene sequence:
>351_bases ATGCCTGCCTACAATTTTAAAGAACGCTTTGCAACGGCAGTCGAGCAAGGCATCAAGCGCTCAACCATTCGGCCACGGCG GCGCAATCCCTCGCGACCAGGCGATCCGTTGTATATGTACACGGGCATGCGTACCCGTGCTTGTCGCAAATTAACCACCG CTACCTGTCGCCAAGTGCGCCCAATCATCATTGACAGCGATCAGGTCTGGCTCGATGGTGAGCAACTTTCTGCCGAGCAA ATTCGCCAGCTCGCCCAAGGTGATGGCTTTAGCCGTGTTGCTGAATTTTTCGATTTCTTTCGCCAGCACTATGGCTTACC AACCGCCGAAATGGATTTGATTGAGTGGTAG
Upstream 100 bases:
>100_bases AAGTACCTAATAATTACTGCTCACTTTTGCACAAGATTGAGATAGTATCTCGATATAATTTAAACTATACGAGATATTAT TGGGTTACAAGGAGTGCTCA
Downstream 100 bases:
>100_bases AATCAAAAATGCCTTAGAAGTTCTAAGGCATTTTGTTTATATATTACCAATTATGGTATAGTTCTCATATAAAGTATTGC CTCAATTAATGGAGTTATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MPAYNFKERFATAVEQGIKRSTIRPRRRNPSRPGDPLYMYTGMRTRACRKLTTATCRQVRPIIIDSDQVWLDGEQLSAEQ IRQLAQGDGFSRVAEFFDFFRQHYGLPTAEMDLIEW
Sequences:
>Translated_116_residues MPAYNFKERFATAVEQGIKRSTIRPRRRNPSRPGDPLYMYTGMRTRACRKLTTATCRQVRPIIIDSDQVWLDGEQLSAEQ IRQLAQGDGFSRVAEFFDFFRQHYGLPTAEMDLIEW >Mature_115_residues PAYNFKERFATAVEQGIKRSTIRPRRRNPSRPGDPLYMYTGMRTRACRKLTTATCRQVRPIIIDSDQVWLDGEQLSAEQI RQLAQGDGFSRVAEFFDFFRQHYGLPTAEMDLIEW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13576; Mature: 13444
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAYNFKERFATAVEQGIKRSTIRPRRRNPSRPGDPLYMYTGMRTRACRKLTTATCRQVR CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCC PIIIDSDQVWLDGEQLSAEQIRQLAQGDGFSRVAEFFDFFRQHYGLPTAEMDLIEW CEEECCCCEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHCCCC >Mature Secondary Structure PAYNFKERFATAVEQGIKRSTIRPRRRNPSRPGDPLYMYTGMRTRACRKLTTATCRQVR CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCC PIIIDSDQVWLDGEQLSAEQIRQLAQGDGFSRVAEFFDFFRQHYGLPTAEMDLIEW CEEECCCCEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA