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The map label for this gene is yacL [H]

Identifier: 159896718

GI number: 159896718

Start: 214663

End: 215820

Strand: Direct

Name: yacL [H]

Synonym: Haur_0185

Alternate gene names: 159896718

Gene position: 214663-215820 (Clockwise)

Preceding gene: 159896717

Following gene: 159896719

Centisome position: 3.38

GC content: 49.48

Gene sequence:

>1158_bases
ATGACGATTTCGGAAAAAAAGGCTGTGGCTGTAAACAGAAATCGCTTACTTAGCATTGATTTTTGGGTGCGCATTTTGGG
GATGGTCGTGCTTGGCTATATTGGCTGGTATTTTGGCTCTAGCTCGGCCAGCAATCCACGAACAAGCGATGAAACCTTAG
CCATGCAGCTACTCACACTTTCGGGGGCTGGCTTGGGTTTATTGATATCCCATCGGATAACCTTATACCCAATTCGCAAT
ATCAACCAACGCTTGCGTCGTAGCACGGCTCAAGAGTTGATTGCCTTGGCGCTGGGATCATTATTGGGTGTGATGCTCGC
AGCATTATTATCCATCCCCCTAAGCCAACTACCTGGTCTTTTAGGCAGCTATTCGCCGGCACTTGCCAGTTTCTTTATTA
TCTACTTTTGTGTTGTAGCCTTCGAGTATCACAAGAAAAATCTGGTTAATTTTGGGGTTTCGCTGCAAACACCCAAAGTT
CGCGCAGTTAAAGAAGCTGTCCCAATGCGTCGAACCTGTTTGGTTGATACAAGCGCCATTATTGATGGTCGAGTTTTGGC
GGTTGTACGCAGTGGGTTTCTTGATGGGATTTTGGTTGTGCCGCGCTTTGTGCTCAACGAATTGCAATTATTGGCCGATT
CGAGCGATGATATGAAGCGGATGCGCGGTCGCCGTGGCTTGGATATGCTCGAAGAAATTCGCAAAGATGATCAATTGCGG
CTCGAAATGCCCAACGATGATATTGCCAATGCGCGTGGCGTTGACCAGAAGTTGGTGACCTTGGCGCTGCAAGATGGTCA
TGCCTTGATTACCAACGATAAGAATTTGAGCCAAGTTGCTGAATTACAAGGCGTGCAGGTACTCAATTTAAATGTGCTTT
CCGATGCGGTACGCCCACCCGTTGGGGCTGGCGAAATGTTGGTTGTGAAAGTGCGTGAAGAAGGCCGCGAGCGCGAACAA
GGCATTGGCTACCTCGAAGATGGCACTATGGTAGTCGTCGAAGATGCCCGCGAACGGATCGGTGATGAAGTTCGGGTGAT
CGTCAGCCGGGTCTGGACGAACGATCGTGGTCGCATGGTCTTTGGGCGAATTATGGGCAGTGCTGGAGCATTTTACGGGG
GCAAAAACGATGCGGGCAATTATCCAGCGCGTAGCTAA

Upstream 100 bases:

>100_bases
TGCGCCGCGACCATCACCTGGTGAGCCGCCAACGGCAAAGGCAACAACTGATACTAATGATGATTAAGCGTGAATTGTGG
ATGTGCTCACGAGGAGATTT

Downstream 100 bases:

>100_bases
TGCCAGCGTTACCGTTGCTGAGCAGATTGTCGGCCAAATTGAGACTGGCTTGTTGGTGTTGCTGGCAGTGAGTCCTAGCG
ATACTAGCGACGATTTGCAA

Product: PilT domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 384

Protein sequence:

>385_residues
MTISEKKAVAVNRNRLLSIDFWVRILGMVVLGYIGWYFGSSSASNPRTSDETLAMQLLTLSGAGLGLLISHRITLYPIRN
INQRLRRSTAQELIALALGSLLGVMLAALLSIPLSQLPGLLGSYSPALASFFIIYFCVVAFEYHKKNLVNFGVSLQTPKV
RAVKEAVPMRRTCLVDTSAIIDGRVLAVVRSGFLDGILVVPRFVLNELQLLADSSDDMKRMRGRRGLDMLEEIRKDDQLR
LEMPNDDIANARGVDQKLVTLALQDGHALITNDKNLSQVAELQGVQVLNLNVLSDAVRPPVGAGEMLVVKVREEGREREQ
GIGYLEDGTMVVVEDARERIGDEVRVIVSRVWTNDRGRMVFGRIMGSAGAFYGGKNDAGNYPARS

Sequences:

>Translated_385_residues
MTISEKKAVAVNRNRLLSIDFWVRILGMVVLGYIGWYFGSSSASNPRTSDETLAMQLLTLSGAGLGLLISHRITLYPIRN
INQRLRRSTAQELIALALGSLLGVMLAALLSIPLSQLPGLLGSYSPALASFFIIYFCVVAFEYHKKNLVNFGVSLQTPKV
RAVKEAVPMRRTCLVDTSAIIDGRVLAVVRSGFLDGILVVPRFVLNELQLLADSSDDMKRMRGRRGLDMLEEIRKDDQLR
LEMPNDDIANARGVDQKLVTLALQDGHALITNDKNLSQVAELQGVQVLNLNVLSDAVRPPVGAGEMLVVKVREEGREREQ
GIGYLEDGTMVVVEDARERIGDEVRVIVSRVWTNDRGRMVFGRIMGSAGAFYGGKNDAGNYPARS
>Mature_384_residues
TISEKKAVAVNRNRLLSIDFWVRILGMVVLGYIGWYFGSSSASNPRTSDETLAMQLLTLSGAGLGLLISHRITLYPIRNI
NQRLRRSTAQELIALALGSLLGVMLAALLSIPLSQLPGLLGSYSPALASFFIIYFCVVAFEYHKKNLVNFGVSLQTPKVR
AVKEAVPMRRTCLVDTSAIIDGRVLAVVRSGFLDGILVVPRFVLNELQLLADSSDDMKRMRGRRGLDMLEEIRKDDQLRL
EMPNDDIANARGVDQKLVTLALQDGHALITNDKNLSQVAELQGVQVLNLNVLSDAVRPPVGAGEMLVVKVREEGREREQG
IGYLEDGTMVVVEDARERIGDEVRVIVSRVWTNDRGRMVFGRIMGSAGAFYGGKNDAGNYPARS

Specific function: Unknown

COG id: COG4956

COG function: function code R; Integral membrane protein (PIN domain superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TRAM domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716
- InterPro:   IPR006596
- InterPro:   IPR002792 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 42370; Mature: 42239

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS50926 TRAM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTISEKKAVAVNRNRLLSIDFWVRILGMVVLGYIGWYFGSSSASNPRTSDETLAMQLLTL
CCCCCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
SGAGLGLLISHRITLYPIRNINQRLRRSTAQELIALALGSLLGVMLAALLSIPLSQLPGL
CCCCCEEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHH
LGSYSPALASFFIIYFCVVAFEYHKKNLVNFGVSLQTPKVRAVKEAVPMRRTCLVDTSAI
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHEECHHHH
IDGRVLAVVRSGFLDGILVVPRFVLNELQLLADSSDDMKRMRGRRGLDMLEEIRKDDQLR
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHCCCCCEE
LEMPNDDIANARGVDQKLVTLALQDGHALITNDKNLSQVAELQGVQVLNLNVLSDAVRPP
EECCCCCCCCCCCCCHHHHEEEEECCCEEEECCCCHHHHHHHCCCEEEEHHHHHHHHCCC
VGAGEMLVVKVREEGREREQGIGYLEDGTMVVVEDARERIGDEVRVIVSRVWTNDRGRMV
CCCCCEEEEEEHHHCCHHHHCCCEECCCCEEEEECHHHHHCHHHHHHHHHHHCCCCCCEE
FGRIMGSAGAFYGGKNDAGNYPARS
HHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TISEKKAVAVNRNRLLSIDFWVRILGMVVLGYIGWYFGSSSASNPRTSDETLAMQLLTL
CCCCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
SGAGLGLLISHRITLYPIRNINQRLRRSTAQELIALALGSLLGVMLAALLSIPLSQLPGL
CCCCCEEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHH
LGSYSPALASFFIIYFCVVAFEYHKKNLVNFGVSLQTPKVRAVKEAVPMRRTCLVDTSAI
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHEECHHHH
IDGRVLAVVRSGFLDGILVVPRFVLNELQLLADSSDDMKRMRGRRGLDMLEEIRKDDQLR
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHCCCCCEE
LEMPNDDIANARGVDQKLVTLALQDGHALITNDKNLSQVAELQGVQVLNLNVLSDAVRPP
EECCCCCCCCCCCCCHHHHEEEEECCCEEEECCCCHHHHHHHCCCEEEEHHHHHHHHCCC
VGAGEMLVVKVREEGREREQGIGYLEDGTMVVVEDARERIGDEVRVIVSRVWTNDRGRMV
CCCCCEEEEEEHHHCCHHHHCCCEECCCCEEEEECHHHHHCHHHHHHHHHHHCCCCCCEE
FGRIMGSAGAFYGGKNDAGNYPARS
HHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377; 7510287 [H]