| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896714
Identifier: 159896714
GI number: 159896714
Start: 210247
End: 211146
Strand: Reverse
Name: 159896714
Synonym: Haur_0181
Alternate gene names: NA
Gene position: 211146-210247 (Counterclockwise)
Preceding gene: 159896715
Following gene: 159896713
Centisome position: 3.33
GC content: 54.0
Gene sequence:
>900_bases ATGACAATCGATGATGAACTTGCCAAAGGCATCGCTGCTGTGCGAGCAGGCCAGCGTGAGCTAGCTCGCCAGCATCTCCA AAAAGTACTCCTTACCGATTCCAAAAACGAGTCCGCTTGGCTTTGGCTCAGTGGAGTCGTCGAAACCCGCACCCAAAAGC GCGACTGCTTACAACTTGTGCTTTCGATCAATCCCAATAATACTGCGGCACGACGCGGGCTGGAAGAATTAGCCCAAAGC GAAGCTGCCGATTTTCTTTCGACGTTTGAGCCACCAGCACCGCCACCAGCACCGCCACCAGCACCGCCACCAGCACCGCC ACCAGTCGCCCCAACCCCAACGCCAGCAGCGCCTATCAGCAGCATGGCTAGTTTCGAAGAGCCACCTGCGGCCATGTTCG AGCCAGTGCCAATCGAGCTTGATCAGCCAATGGCTGGCTTTGGTTTTGCCCCAATGGTCACTGAAGTAACGCCTGAGCCA GCTCCGGTGCTTGGCAATATGCCAACGAATGTGCCCAAGCCGCCGCAAAATCTCGAAGCGCCCTGCGCATTTTGTGGCAC ACCGACCCAAAGCACTGGTGAATGTAGCAATTGTGGCACTGAGCAAACCTTCGATTGCCCCAATTGTGGGCATGTGCTCG ATGTGCGCGAAAACTGGATCTGCGAGTGTGGTCATTCCTTCGAGAATTTTCTTACGCCCGAACGCAAGCTTGATCGCGAA CGGCTTGGCCAGATGTATAGCGACCGCGATTTTCCTGCTGCAGCAGTTAAACAATGGAAGGCAGCCTTGCCAACCAGCCG TCGTCCGCAACAACTCCATGCAGCAATTGGGCGGGTTTATGATAATCTAGGCTTATATGAGCAAGCTGAAATGCACTATA GGTTATCAAAACAAAAATGA
Upstream 100 bases:
>100_bases TCCTTAGCCAATCTTTACTTGCATCAAGCCAAATCTATGTCAAAATCGGTGTATCCTTGAAAATAGCCAATGAATGTCTC TTTAGCGATGGATTACCGTT
Downstream 100 bases:
>100_bases TCGATCGTGAACTATTACAAACCACCTTGGCTGAGTGGCAACTAACCCTTAGCACCAGCCAAATCGACCGCTTGGAGCAC TACGTGGCGTTGCTGACGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MTIDDELAKGIAAVRAGQRELARQHLQKVLLTDSKNESAWLWLSGVVETRTQKRDCLQLVLSINPNNTAARRGLEELAQS EAADFLSTFEPPAPPPAPPPAPPPAPPPVAPTPTPAAPISSMASFEEPPAAMFEPVPIELDQPMAGFGFAPMVTEVTPEP APVLGNMPTNVPKPPQNLEAPCAFCGTPTQSTGECSNCGTEQTFDCPNCGHVLDVRENWICECGHSFENFLTPERKLDRE RLGQMYSDRDFPAAAVKQWKAALPTSRRPQQLHAAIGRVYDNLGLYEQAEMHYRLSKQK
Sequences:
>Translated_299_residues MTIDDELAKGIAAVRAGQRELARQHLQKVLLTDSKNESAWLWLSGVVETRTQKRDCLQLVLSINPNNTAARRGLEELAQS EAADFLSTFEPPAPPPAPPPAPPPAPPPVAPTPTPAAPISSMASFEEPPAAMFEPVPIELDQPMAGFGFAPMVTEVTPEP APVLGNMPTNVPKPPQNLEAPCAFCGTPTQSTGECSNCGTEQTFDCPNCGHVLDVRENWICECGHSFENFLTPERKLDRE RLGQMYSDRDFPAAAVKQWKAALPTSRRPQQLHAAIGRVYDNLGLYEQAEMHYRLSKQK >Mature_298_residues TIDDELAKGIAAVRAGQRELARQHLQKVLLTDSKNESAWLWLSGVVETRTQKRDCLQLVLSINPNNTAARRGLEELAQSE AADFLSTFEPPAPPPAPPPAPPPAPPPVAPTPTPAAPISSMASFEEPPAAMFEPVPIELDQPMAGFGFAPMVTEVTPEPA PVLGNMPTNVPKPPQNLEAPCAFCGTPTQSTGECSNCGTEQTFDCPNCGHVLDVRENWICECGHSFENFLTPERKLDRER LGQMYSDRDFPAAAVKQWKAALPTSRRPQQLHAAIGRVYDNLGLYEQAEMHYRLSKQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32672; Mature: 32541
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIDDELAKGIAAVRAGQRELARQHLQKVLLTDSKNESAWLWLSGVVETRTQKRDCLQLV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHH LSINPNNTAARRGLEELAQSEAADFLSTFEPPAPPPAPPPAPPPAPPPVAPTPTPAAPIS HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH SMASFEEPPAAMFEPVPIELDQPMAGFGFAPMVTEVTPEPAPVLGNMPTNVPKPPQNLEA HHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCC PCAFCGTPTQSTGECSNCGTEQTFDCPNCGHVLDVRENWICECGHSFENFLTPERKLDRE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHCCCHHHHHCCCHHHHHHH RLGQMYSDRDFPAAAVKQWKAALPTSRRPQQLHAAIGRVYDNLGLYEQAEMHYRLSKQK HHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC >Mature Secondary Structure TIDDELAKGIAAVRAGQRELARQHLQKVLLTDSKNESAWLWLSGVVETRTQKRDCLQLV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHH LSINPNNTAARRGLEELAQSEAADFLSTFEPPAPPPAPPPAPPPAPPPVAPTPTPAAPIS HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH SMASFEEPPAAMFEPVPIELDQPMAGFGFAPMVTEVTPEPAPVLGNMPTNVPKPPQNLEA HHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCC PCAFCGTPTQSTGECSNCGTEQTFDCPNCGHVLDVRENWICECGHSFENFLTPERKLDRE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHCCCHHHHHCCCHHHHHHH RLGQMYSDRDFPAAAVKQWKAALPTSRRPQQLHAAIGRVYDNLGLYEQAEMHYRLSKQK HHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA