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The map label for this gene is pspA [C]

Identifier: 159896712

GI number: 159896712

Start: 208779

End: 209441

Strand: Reverse

Name: pspA [C]

Synonym: Haur_0179

Alternate gene names: 159896712

Gene position: 209441-208779 (Counterclockwise)

Preceding gene: 159896713

Following gene: 159896710

Centisome position: 3.3

GC content: 47.96

Gene sequence:

>663_bases
ATGTCGTTGTTGAGCCGTGTTCGCGACCTGGTTAGCGCTAATCTCAATGCGATGTTGGATAAGGCCGAAGACCCTGAAAA
AATGGTCAACGAGTACATGCGGCAATTGCAAGAACAACTGTACGAAGCCAAAACCGCTGTTGCATCCGCCATGGCCGATG
AAACCAAATTGCACAACAAAATGGTGACATTCCAAACCGAAGCTGATCAATGGCAATCCAAGGCTGAAGCTGCGGTTCGC
GCAAGTGACGATGAATTGGCTAAAGCTGCCTTAGGCCGCAAAGCCAATGCTCAAAAAATGGCTGATACCTATCGCCAACA
ATACGAACAACAAGACGAACAAGTTGAGCAACTGCAAAAAGCCTTGGTCAGTCTTGAATCACGCTTGTCGGAAGCCAAAG
CCAAGAAAGAATTGATTATCGCCAAGAAGAATCGCGCCGAAACCCAAGAAGCGATTCAACGCACGGTTCAAGGCTTGGGC
AACCTCAATGCGATGGATAAATTATCCCAAATGGAAGAACGGGTCGATGATCGCTTGGCTCAAGCCGATGCTATGTCGAA
ACTTGAAGGTAGCTCGCTCGAAACTCGCTTTGCCGACCTCGAACGCGATACTGCTGTCGAAGATGAATTGGCCGCTTTGA
AAGCAAAAATGGGTAAACAATAG

Upstream 100 bases:

>100_bases
AACTTTTTGGAAAAGCGCTTCGTACCACTTGAGAACCGCCAGCGCGGTGTGCTAGAATGAAGTTCACACAGTCTTTGTGT
TTAGCTAAGGAGGAATTCCT

Downstream 100 bases:

>100_bases
TTTTGAAATCGCGGGTGTTGGCGCAAACCAACACCCGCTTTTGATTTAACTGCTTTATCCCAGCAATACCGCAATCGCAA
AGCCTAAAATAATCAAGCCA

Product: phage shock protein PspA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MSLLSRVRDLVSANLNAMLDKAEDPEKMVNEYMRQLQEQLYEAKTAVASAMADETKLHNKMVTFQTEADQWQSKAEAAVR
ASDDELAKAALGRKANAQKMADTYRQQYEQQDEQVEQLQKALVSLESRLSEAKAKKELIIAKKNRAETQEAIQRTVQGLG
NLNAMDKLSQMEERVDDRLAQADAMSKLEGSSLETRFADLERDTAVEDELAALKAKMGKQ

Sequences:

>Translated_220_residues
MSLLSRVRDLVSANLNAMLDKAEDPEKMVNEYMRQLQEQLYEAKTAVASAMADETKLHNKMVTFQTEADQWQSKAEAAVR
ASDDELAKAALGRKANAQKMADTYRQQYEQQDEQVEQLQKALVSLESRLSEAKAKKELIIAKKNRAETQEAIQRTVQGLG
NLNAMDKLSQMEERVDDRLAQADAMSKLEGSSLETRFADLERDTAVEDELAALKAKMGKQ
>Mature_219_residues
SLLSRVRDLVSANLNAMLDKAEDPEKMVNEYMRQLQEQLYEAKTAVASAMADETKLHNKMVTFQTEADQWQSKAEAAVRA
SDDELAKAALGRKANAQKMADTYRQQYEQQDEQVEQLQKALVSLESRLSEAKAKKELIIAKKNRAETQEAIQRTVQGLGN
LNAMDKLSQMEERVDDRLAQADAMSKLEGSSLETRFADLERDTAVEDELAALKAKMGKQ

Specific function: The Phage Shock Protein (Psp) Operon (Pspabce) May Play A Significant Role In The Competition For Survival Under Nutrient- Or Energy-Limited Conditions. Pspa Has A Role As A Negative Regulator, Is Required For Efficient Translocation And Has An Unknown Fu

COG id: COG1842

COG function: function code KT; Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspA/IM30 family [H]

Homologues:

Organism=Escherichia coli, GI2367118, Length=218, Percent_Identity=31.651376146789, Blast_Score=107, Evalue=6e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007157 [H]

Pfam domain/function: PF04012 PspA_IM30 [H]

EC number: NA

Molecular weight: Translated: 24728; Mature: 24597

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLSRVRDLVSANLNAMLDKAEDPEKMVNEYMRQLQEQLYEAKTAVASAMADETKLHNK
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVTFQTEADQWQSKAEAAVRASDDELAKAALGRKANAQKMADTYRQQYEQQDEQVEQLQK
HHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ALVSLESRLSEAKAKKELIIAKKNRAETQEAIQRTVQGLGNLNAMDKLSQMEERVDDRLA
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
QADAMSKLEGSSLETRFADLERDTAVEDELAALKAKMGKQ
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLLSRVRDLVSANLNAMLDKAEDPEKMVNEYMRQLQEQLYEAKTAVASAMADETKLHNK
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVTFQTEADQWQSKAEAAVRASDDELAKAALGRKANAQKMADTYRQQYEQQDEQVEQLQK
HHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ALVSLESRLSEAKAKKELIIAKKNRAETQEAIQRTVQGLGNLNAMDKLSQMEERVDDRLA
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
QADAMSKLEGSSLETRFADLERDTAVEDELAALKAKMGKQ
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]