| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is yahN [C]
Identifier: 159896711
GI number: 159896711
Start: 208131
End: 208724
Strand: Direct
Name: yahN [C]
Synonym: Haur_0178
Alternate gene names: 159896711
Gene position: 208131-208724 (Clockwise)
Preceding gene: 159896708
Following gene: 159896717
Centisome position: 3.28
GC content: 51.01
Gene sequence:
>594_bases ATGTTGCTGAAAGGGCTTATTTTGGGGTTTTCGATTGCCGCACCAGTTGGGCCGATTGGGGTGTTGTGCATTCGACGTAG TTTAATTCATGGACGGTTGGCGGGCTTTTTATCAGGCTTGGGAGCGGCAACTGCCGATGGTTTGTATGGCATGTTGGCAG CGTTTGGTTTGGCGGCAGCCCTCAACAAACTTGACCAAGATTCGGGCTGGTTGCTGGGATTACGGATTATCAGCGGCCTA TTTCTCGGCTATTTGGCGATCAAGACCATGCTAAGTCGTCCGGCGACCGAAGCAGCGCATGCCAAAGCCGATAATTTATG GGCGATGTATGCCTCGACGCTCTTCTTGACCTTGACCAACCCTTTGACGATTTTATCGTTTGCGACAGTTTTTGCTGGCT TGGGAATTACGGCCTATGGCTGGGATAGCGTGTGGTTGGTGCTGGGCGTGACCACGGGTTCGGCTTTATGGTGGTTGTTG TTGAGTGGCAGCGTGAGCTTATTGCGTGAGCGAGTGCAAGCCTATAGCGTTTGGATCAATCGAATTTCTGGCTTGATTAT TTTAGGCTTTGCGATTGCGGTATTGCTGGGATAA
Upstream 100 bases:
>100_bases TTGTAGGGTAACGAATATACTACCATTGTTGCAAGCACTCGCGTGCAATTTATGCGAAACTAGCCTTGATCGACGATTTT AGGCAAGTGAGGGCATTGCG
Downstream 100 bases:
>100_bases AGCAGTTAAATCAAAAGCGGGTGTTGGTTTGCGCCAACACCCGCGATTTCAAAACTATTGTTTACCCATTTTTGCTTTCA AAGCGGCCAATTCATCTTCG
Product: lysine exporter protein LysE/YggA
Products: NA
Alternate protein names: Lysine Exporter Protein; Translocator Protein LysE Family; LysE Family Translocator Protein; Translocator Protein LysE Family Protein; Threonine Efflux Protein; Amino Acid Exporter
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MLLKGLILGFSIAAPVGPIGVLCIRRSLIHGRLAGFLSGLGAATADGLYGMLAAFGLAAALNKLDQDSGWLLGLRIISGL FLGYLAIKTMLSRPATEAAHAKADNLWAMYASTLFLTLTNPLTILSFATVFAGLGITAYGWDSVWLVLGVTTGSALWWLL LSGSVSLLRERVQAYSVWINRISGLIILGFAIAVLLG
Sequences:
>Translated_197_residues MLLKGLILGFSIAAPVGPIGVLCIRRSLIHGRLAGFLSGLGAATADGLYGMLAAFGLAAALNKLDQDSGWLLGLRIISGL FLGYLAIKTMLSRPATEAAHAKADNLWAMYASTLFLTLTNPLTILSFATVFAGLGITAYGWDSVWLVLGVTTGSALWWLL LSGSVSLLRERVQAYSVWINRISGLIILGFAIAVLLG >Mature_197_residues MLLKGLILGFSIAAPVGPIGVLCIRRSLIHGRLAGFLSGLGAATADGLYGMLAAFGLAAALNKLDQDSGWLLGLRIISGL FLGYLAIKTMLSRPATEAAHAKADNLWAMYASTLFLTLTNPLTILSFATVFAGLGITAYGWDSVWLVLGVTTGSALWWLL LSGSVSLLRERVQAYSVWINRISGLIILGFAIAVLLG
Specific function: Unknown
COG id: COG1280
COG function: function code E; Putative threonine efflux protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20765; Mature: 20765
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLKGLILGFSIAAPVGPIGVLCIRRSLIHGRLAGFLSGLGAATADGLYGMLAAFGLAAA CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LNKLDQDSGWLLGLRIISGLFLGYLAIKTMLSRPATEAAHAKADNLWAMYASTLFLTLTN HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC PLTILSFATVFAGLGITAYGWDSVWLVLGVTTGSALWWLLLSGSVSLLRERVQAYSVWIN HHHHHHHHHHHHHCCCEEECCCCEEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHH RISGLIILGFAIAVLLG HHHHHHHHHHHHHHHCC >Mature Secondary Structure MLLKGLILGFSIAAPVGPIGVLCIRRSLIHGRLAGFLSGLGAATADGLYGMLAAFGLAAA CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LNKLDQDSGWLLGLRIISGLFLGYLAIKTMLSRPATEAAHAKADNLWAMYASTLFLTLTN HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC PLTILSFATVFAGLGITAYGWDSVWLVLGVTTGSALWWLLLSGSVSLLRERVQAYSVWIN HHHHHHHHHHHHHCCCEEECCCCEEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHH RISGLIILGFAIAVLLG HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA