| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is yihV [C]
Identifier: 159896681
GI number: 159896681
Start: 179641
End: 180549
Strand: Reverse
Name: yihV [C]
Synonym: Haur_0148
Alternate gene names: 159896681
Gene position: 180549-179641 (Counterclockwise)
Preceding gene: 159896682
Following gene: 159896680
Centisome position: 2.84
GC content: 50.5
Gene sequence:
>909_bases ATGGAGCAATCGATTGTTGTTTTTGGCGATCTTAATCTTGATACTAGTGTTTCGATTGGGCAATTTCCACTGCATGAAGG CGATACACTGTTTAGCTTCGACGGCATTAGCGATGCGATTGGCGGAGCAGCGGCCAATGTTGCGGTTGGCTTAACTGCGC TGGGGCATCAGGTTCATTTTGGCAGCGTGGTCGGCCAAGATCGCATGGCCGAGCTAGTGCAGCAACTAGCACAAGCCAAA GGTTTAGCCACCAACTCCATTCGCCCCGATTGGCCAACGACCTCGCGCACAGTTGTATTAATTGATGCTGCTGGGAATCG TCAGTGCATCAACGACCCCAAAGCAGTGCATCGTTATCGTTACCCCGAAGCGGCGTTACCCACGCTATTTGAACAAAGCC AGTGGGTCTATTGCTCAACTCAAAACTGGTGTCGTTACGTTGCCCAAGCCGCCCGTGACGCAGGCAGCACGGTCATTGTC GATGTACAAGCCTTGGTTGATATTGACGAATATCACCGTGATTTTCTGCAAGCTGCTTCGATTATTATCCTTAGCACCGA GCAACTGGCCATGCATAGCCATGAATTCATGCGCCGCCTATGGCAACAATTTGAGATTGACATCGTGGTAGCAACCCATG GCAATCATGGCGCAACCCTCGGCGTGCGAGCAACCAACACAATCGAGTATCAGCCAGCCTTTGAGCTTGGGTCAGTTGTT GATAAAACAGGGGCAGGCGATGCATTTTGTGCTGGCTTTATTGCTGGTTTGGCTAGCGATTTAACTCCACGCCAAGCTCT GAGTTTTGGGCAATACGTGGCTGCTAGCAAAATCGCAATCAAAGGCTCAACCAATGGCTTTCCTGAGCGAACCCATGTGT TGCAAGCATTAGCGCAATTGCCAACATAA
Upstream 100 bases:
>100_bases AACCCAACCATGAAGTCGGTTGGTACGAAGCCCCATGGATTATCGCCCACCCGCGCTAGCCCCAAACAGCCACTAAACTA TTGAGTTTGAGGCGAATACA
Downstream 100 bases:
>100_bases ACTGTCACCGCTTCGTCATCTTTAATCCTATTGTTTGCTAGCCCCCCTCGTTACAATTGAGCACAACACAGATGGGGACA ACAGCAATGACGCACGTAAT
Product: ribokinase-like domain-containing protein
Products: NA
Alternate protein names: Ribokinase-Like Domain-Containing Protein; Ribokinase Family Sugar Kinase; Ribokinase; PfkB Domain Protein; Carbohydrate Kinase PfkB Family Protein; Acarbose-7-Kinase Gack
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MEQSIVVFGDLNLDTSVSIGQFPLHEGDTLFSFDGISDAIGGAAANVAVGLTALGHQVHFGSVVGQDRMAELVQQLAQAK GLATNSIRPDWPTTSRTVVLIDAAGNRQCINDPKAVHRYRYPEAALPTLFEQSQWVYCSTQNWCRYVAQAARDAGSTVIV DVQALVDIDEYHRDFLQAASIIILSTEQLAMHSHEFMRRLWQQFEIDIVVATHGNHGATLGVRATNTIEYQPAFELGSVV DKTGAGDAFCAGFIAGLASDLTPRQALSFGQYVAASKIAIKGSTNGFPERTHVLQALAQLPT
Sequences:
>Translated_302_residues MEQSIVVFGDLNLDTSVSIGQFPLHEGDTLFSFDGISDAIGGAAANVAVGLTALGHQVHFGSVVGQDRMAELVQQLAQAK GLATNSIRPDWPTTSRTVVLIDAAGNRQCINDPKAVHRYRYPEAALPTLFEQSQWVYCSTQNWCRYVAQAARDAGSTVIV DVQALVDIDEYHRDFLQAASIIILSTEQLAMHSHEFMRRLWQQFEIDIVVATHGNHGATLGVRATNTIEYQPAFELGSVV DKTGAGDAFCAGFIAGLASDLTPRQALSFGQYVAASKIAIKGSTNGFPERTHVLQALAQLPT >Mature_302_residues MEQSIVVFGDLNLDTSVSIGQFPLHEGDTLFSFDGISDAIGGAAANVAVGLTALGHQVHFGSVVGQDRMAELVQQLAQAK GLATNSIRPDWPTTSRTVVLIDAAGNRQCINDPKAVHRYRYPEAALPTLFEQSQWVYCSTQNWCRYVAQAARDAGSTVIV DVQALVDIDEYHRDFLQAASIIILSTEQLAMHSHEFMRRLWQQFEIDIVVATHGNHGATLGVRATNTIEYQPAFELGSVV DKTGAGDAFCAGFIAGLASDLTPRQALSFGQYVAASKIAIKGSTNGFPERTHVLQALAQLPT
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32631; Mature: 32631
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: PS00583 PFKB_KINASES_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQSIVVFGDLNLDTSVSIGQFPLHEGDTLFSFDGISDAIGGAAANVAVGLTALGHQVHF CCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCHHHHCCHHHHHHHHHHHHCCEEEE GSVVGQDRMAELVQQLAQAKGLATNSIRPDWPTTSRTVVLIDAAGNRQCINDPKAVHRYR HHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHCC YPEAALPTLFEQSQWVYCSTQNWCRYVAQAARDAGSTVIVDVQALVDIDEYHRDFLQAAS CCCHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCEEEEEHHHHHCHHHHHHHHHHHHH IIILSTEQLAMHSHEFMRRLWQQFEIDIVVATHGNHGATLGVRATNTIEYQPAFELGSVV EEEEEHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCEEEEEECCEEEECCCHHHHHHH DKTGAGDAFCAGFIAGLASDLTPRQALSFGQYVAASKIAIKGSTNGFPERTHVLQALAQL HCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHC PT CC >Mature Secondary Structure MEQSIVVFGDLNLDTSVSIGQFPLHEGDTLFSFDGISDAIGGAAANVAVGLTALGHQVHF CCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCHHHHCCHHHHHHHHHHHHCCEEEE GSVVGQDRMAELVQQLAQAKGLATNSIRPDWPTTSRTVVLIDAAGNRQCINDPKAVHRYR HHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHCC YPEAALPTLFEQSQWVYCSTQNWCRYVAQAARDAGSTVIVDVQALVDIDEYHRDFLQAAS CCCHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCEEEEEHHHHHCHHHHHHHHHHHHH IIILSTEQLAMHSHEFMRRLWQQFEIDIVVATHGNHGATLGVRATNTIEYQPAFELGSVV EEEEEHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCEEEEEECCEEEECCCHHHHHHH DKTGAGDAFCAGFIAGLASDLTPRQALSFGQYVAASKIAIKGSTNGFPERTHVLQALAQL HCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHC PT CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups; Phosphotransferases with an alcohol group as acceptor [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA