Click here to switch to the map view.

The map label for this gene is 159896634

Identifier: 159896634

GI number: 159896634

Start: 131127

End: 131672

Strand: Reverse

Name: 159896634

Synonym: Haur_0101

Alternate gene names: NA

Gene position: 131672-131127 (Counterclockwise)

Preceding gene: 159896635

Following gene: 159896633

Centisome position: 2.07

GC content: 55.31

Gene sequence:

>546_bases
ATGAACAATCGCGCAATTGCCCAAATTCTGTTTAACATTGCCACGTTGCTGAAGCGCCAAAACGCCAATCCCTATCGGGT
GCGGCGCTATCGCGAAGTAGCTCGCGCCATTCTCCGCCTGCGCCATTCCCTCACCGAACGCGCCTTAGCTGGCAAAGCCT
TAGGCATCAACAAACTTGGGGCCAGCCTCACGCGCAAAATCACCGTGCTAGCTGCCCAAGGCCAACTCGATTTTTACGAC
GATTTGTGTGCCTTGCTGCCACCCAGCCAACAACGCTTGCTGAAAATCGCGGGCATTGGGCCAATTTTGGCCGAACGCAT
TAGCCAAGAGCTAGGCGATGTCGAGCTAGCAACCTTGCTACGTGAAGCTGCCTACCAACGTTTGACCGCGATCTGGGGGG
TTGGGCCACAACGCGCCGATCTGATTGTCTCGAATATGTTTCCCGATGATCCGCCACCGCCAGCCAATGCTGCTCACAGT
GCCCGCAAAAGCAACATCATCTACACCCAACCAACCTTATGGGAGTATGGGCAAAAAGCCGCCTAG

Upstream 100 bases:

>100_bases
TAATCACGCTTGCGATTTCGCTTAAATGTAGTACAATTAGCACAGATGTTTCATCACAGACACAGTACGTTTGAACCAGT
AGAAAGCTTTGGTGATAGCC

Downstream 100 bases:

>100_bases
GAGGATGCATGACCCGACCTGCCACCCAAGCCGAGCAGCCAGAGCAAGAACAATGGCTGCTCGACGAGGCAAGTTTGCTC
GATGCAAGCCTGCTTGATGA

Product: family X DNA polymerase IV

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MNNRAIAQILFNIATLLKRQNANPYRVRRYREVARAILRLRHSLTERALAGKALGINKLGASLTRKITVLAAQGQLDFYD
DLCALLPPSQQRLLKIAGIGPILAERISQELGDVELATLLREAAYQRLTAIWGVGPQRADLIVSNMFPDDPPPPANAAHS
ARKSNIIYTQPTLWEYGQKAA

Sequences:

>Translated_181_residues
MNNRAIAQILFNIATLLKRQNANPYRVRRYREVARAILRLRHSLTERALAGKALGINKLGASLTRKITVLAAQGQLDFYD
DLCALLPPSQQRLLKIAGIGPILAERISQELGDVELATLLREAAYQRLTAIWGVGPQRADLIVSNMFPDDPPPPANAAHS
ARKSNIIYTQPTLWEYGQKAA
>Mature_181_residues
MNNRAIAQILFNIATLLKRQNANPYRVRRYREVARAILRLRHSLTERALAGKALGINKLGASLTRKITVLAAQGQLDFYD
DLCALLPPSQQRLLKIAGIGPILAERISQELGDVELATLLREAAYQRLTAIWGVGPQRADLIVSNMFPDDPPPPANAAHS
ARKSNIIYTQPTLWEYGQKAA

Specific function: Unknown

COG id: COG1796

COG function: function code L; DNA polymerase IV (family X)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20063; Mature: 20063

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNRAIAQILFNIATLLKRQNANPYRVRRYREVARAILRLRHSLTERALAGKALGINKLG
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
ASLTRKITVLAAQGQLDFYDDLCALLPPSQQRLLKIAGIGPILAERISQELGDVELATLL
HHHHHHHHEEEECCCCCHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHH
REAAYQRLTAIWGVGPQRADLIVSNMFPDDPPPPANAAHSARKSNIIYTQPTLWEYGQKA
HHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCEEEECCHHHHCCCCC
A
C
>Mature Secondary Structure
MNNRAIAQILFNIATLLKRQNANPYRVRRYREVARAILRLRHSLTERALAGKALGINKLG
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
ASLTRKITVLAAQGQLDFYDDLCALLPPSQQRLLKIAGIGPILAERISQELGDVELATLL
HHHHHHHHEEEECCCCCHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHH
REAAYQRLTAIWGVGPQRADLIVSNMFPDDPPPPANAAHSARKSNIIYTQPTLWEYGQKA
HHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCEEEECCHHHHCCCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA