| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896626
Identifier: 159896626
GI number: 159896626
Start: 119861
End: 120172
Strand: Direct
Name: 159896626
Synonym: Haur_0093
Alternate gene names: NA
Gene position: 119861-120172 (Clockwise)
Preceding gene: 159896625
Following gene: 159896628
Centisome position: 1.89
GC content: 45.83
Gene sequence:
>312_bases ATGATGATTTTACTGCTGATTATTGGCATGGGCTGCGTGACATTTTTGCTGCGGCTCTCGTTTATTAGCGTTGCGGGTAA AACCAGCATGCCTCAATGGTTGCAACGCTGTTTGCAATTTGTGCCGATTGCCGTGCTGATGGCAATTATTGTGCCTGATT TAATCTATCAACAGCATCGTTATCAATTGCTCAACAATAATGAGCGCTTGATTGCGGGCTTGGTAGCGGCCTTGGTTGCT TGGAAAACCAATAATGTGCTGCTGACGATTGGAACTGGCATGGGTTTGTTGTGGCTGTTGCAAAGCTTGTAG
Upstream 100 bases:
>100_bases TTATGGCGGGAGCCACGGTCATGCTGCCCTATAAATTGGGCTTGGTGTTGAGTGTATTGGCGGGGGTTGGGCTTGGTTTG TATCTTGAGGGGCGGCAGGC
Downstream 100 bases:
>100_bases CATTTCCCTCGCTCCCTTCTCTCACGATGGTGGCAGCTAGCTTCCAAGGCTGGGTTTTAAGATCCCTCATCCCCAACCCT TCTCCCACTGCGGCGGGAGA
Product: branched-chain amino acid transport
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MMILLLIIGMGCVTFLLRLSFISVAGKTSMPQWLQRCLQFVPIAVLMAIIVPDLIYQQHRYQLLNNNERLIAGLVAALVA WKTNNVLLTIGTGMGLLWLLQSL
Sequences:
>Translated_103_residues MMILLLIIGMGCVTFLLRLSFISVAGKTSMPQWLQRCLQFVPIAVLMAIIVPDLIYQQHRYQLLNNNERLIAGLVAALVA WKTNNVLLTIGTGMGLLWLLQSL >Mature_103_residues MMILLLIIGMGCVTFLLRLSFISVAGKTSMPQWLQRCLQFVPIAVLMAIIVPDLIYQQHRYQLLNNNERLIAGLVAALVA WKTNNVLLTIGTGMGLLWLLQSL
Specific function: Unknown
COG id: COG4392
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11524; Mature: 11524
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMILLLIIGMGCVTFLLRLSFISVAGKTSMPQWLQRCLQFVPIAVLMAIIVPDLIYQQHR CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YQLLNNNERLIAGLVAALVAWKTNNVLLTIGTGMGLLWLLQSL HHHHCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHC >Mature Secondary Structure MMILLLIIGMGCVTFLLRLSFISVAGKTSMPQWLQRCLQFVPIAVLMAIIVPDLIYQQHR CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YQLLNNNERLIAGLVAALVAWKTNNVLLTIGTGMGLLWLLQSL HHHHCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA