Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159896620

Identifier: 159896620

GI number: 159896620

Start: 112339

End: 113070

Strand: Reverse

Name: 159896620

Synonym: Haur_0087

Alternate gene names: NA

Gene position: 113070-112339 (Counterclockwise)

Preceding gene: 159896627

Following gene: 159896619

Centisome position: 1.78

GC content: 53.28

Gene sequence:

>732_bases
ATGCGTTGGATGTTTGGTTTTTTCGCGACCTGTCTAGCTCTCTGGCAAATCTCGCCAGCCGCCGCCTGTAAAATGATCGA
ACCGACTCTCGATAGCGTAACCCAACAATCTGAACTGGTGGTTATCGCCACCGTTACCAAGATTGAAGGCAGCCAAGCAA
CATTTAGCGTCGAGGCTCCGATCAAAGGGAATTTGCCGCAAAATGATCTCGATGTGCTCAATCATCAAATTAACAATGGA
GCCGATTGCCAACCAACCTTGGGCGATGGCGAGCGCTTTGCTGAAGGCAGCCGCTGGGTATTGTTCCTTGTGCCAACCAC
ACTCGACCCTGATATCACTTGGCAAACGGCTAGTTTCGGCGATTATGGGGCGCTCAAAGTTGAGCAAGATCAAGTCAGCT
ATACCGAACAAGGCACGCCGCAGCAAATTTCATTACCTGATATGGTCGAAACCTTGAGCAATTATGCCAGCCTCGCCCCC
AACGAATTGGTCGATCCACTACCTGGCGGCGGGGCAGCAGCACCAGCAGTTGAGCCACAAATTTTGCCGGCCCCAGCCCC
TGAGTTGATCGATACCGATCCGAATGCCAACCCAGTTGCCCAAGTTGATGTTGCACCAACTATTGCACCAACTGCTGCTG
CTCCAAGCTGGCTGCCGTGGGTTTTGGTTGGCGTAGGTGTGGTTGCCGCCATCGGCGCATTGATTGGCTGGCAACGCAGT
CGTCGTGCCTAA

Upstream 100 bases:

>100_bases
CGAGCACTAAGGAACTTCTTAGGCCCAGCCAACGTTATGGCTTTAAGCAAACCTTTACTATGCAACAAATTAAGCTAGTT
TTATTTGAATGGAGTGTGTC

Downstream 100 bases:

>100_bases
GGAGTAATCTGTATGCGTTGGATTTGGGGATGTTTGATCATATTAATCGTGCTGCTGCCTGCAACTCCTGCCGCTGCTTG
CTCGATGATCGAGCCAACCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MRWMFGFFATCLALWQISPAAACKMIEPTLDSVTQQSELVVIATVTKIEGSQATFSVEAPIKGNLPQNDLDVLNHQINNG
ADCQPTLGDGERFAEGSRWVLFLVPTTLDPDITWQTASFGDYGALKVEQDQVSYTEQGTPQQISLPDMVETLSNYASLAP
NELVDPLPGGGAAAPAVEPQILPAPAPELIDTDPNANPVAQVDVAPTIAPTAAAPSWLPWVLVGVGVVAAIGALIGWQRS
RRA

Sequences:

>Translated_243_residues
MRWMFGFFATCLALWQISPAAACKMIEPTLDSVTQQSELVVIATVTKIEGSQATFSVEAPIKGNLPQNDLDVLNHQINNG
ADCQPTLGDGERFAEGSRWVLFLVPTTLDPDITWQTASFGDYGALKVEQDQVSYTEQGTPQQISLPDMVETLSNYASLAP
NELVDPLPGGGAAAPAVEPQILPAPAPELIDTDPNANPVAQVDVAPTIAPTAAAPSWLPWVLVGVGVVAAIGALIGWQRS
RRA
>Mature_243_residues
MRWMFGFFATCLALWQISPAAACKMIEPTLDSVTQQSELVVIATVTKIEGSQATFSVEAPIKGNLPQNDLDVLNHQINNG
ADCQPTLGDGERFAEGSRWVLFLVPTTLDPDITWQTASFGDYGALKVEQDQVSYTEQGTPQQISLPDMVETLSNYASLAP
NELVDPLPGGGAAAPAVEPQILPAPAPELIDTDPNANPVAQVDVAPTIAPTAAAPSWLPWVLVGVGVVAAIGALIGWQRS
RRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25800; Mature: 25800

Theoretical pI: Translated: 3.88; Mature: 3.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWMFGFFATCLALWQISPAAACKMIEPTLDSVTQQSELVVIATVTKIEGSQATFSVEAP
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEEECC
IKGNLPQNDLDVLNHQINNGADCQPTLGDGERFAEGSRWVLFLVPTTLDPDITWQTASFG
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCEEEEEECCCCCCCCEEEECCCC
DYGALKVEQDQVSYTEQGTPQQISLPDMVETLSNYASLAPNELVDPLPGGGAAAPAVEPQ
CCCEEEEEHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCC
ILPAPAPELIDTDPNANPVAQVDVAPTIAPTAAAPSWLPWVLVGVGVVAAIGALIGWQRS
CCCCCCCHHCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RRA
CCC
>Mature Secondary Structure
MRWMFGFFATCLALWQISPAAACKMIEPTLDSVTQQSELVVIATVTKIEGSQATFSVEAP
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEEECC
IKGNLPQNDLDVLNHQINNGADCQPTLGDGERFAEGSRWVLFLVPTTLDPDITWQTASFG
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCEEEEEECCCCCCCCEEEECCCC
DYGALKVEQDQVSYTEQGTPQQISLPDMVETLSNYASLAPNELVDPLPGGGAAAPAVEPQ
CCCEEEEEHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCC
ILPAPAPELIDTDPNANPVAQVDVAPTIAPTAAAPSWLPWVLVGVGVVAAIGALIGWQRS
CCCCCCCHHCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RRA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA