| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896620
Identifier: 159896620
GI number: 159896620
Start: 112339
End: 113070
Strand: Reverse
Name: 159896620
Synonym: Haur_0087
Alternate gene names: NA
Gene position: 113070-112339 (Counterclockwise)
Preceding gene: 159896627
Following gene: 159896619
Centisome position: 1.78
GC content: 53.28
Gene sequence:
>732_bases ATGCGTTGGATGTTTGGTTTTTTCGCGACCTGTCTAGCTCTCTGGCAAATCTCGCCAGCCGCCGCCTGTAAAATGATCGA ACCGACTCTCGATAGCGTAACCCAACAATCTGAACTGGTGGTTATCGCCACCGTTACCAAGATTGAAGGCAGCCAAGCAA CATTTAGCGTCGAGGCTCCGATCAAAGGGAATTTGCCGCAAAATGATCTCGATGTGCTCAATCATCAAATTAACAATGGA GCCGATTGCCAACCAACCTTGGGCGATGGCGAGCGCTTTGCTGAAGGCAGCCGCTGGGTATTGTTCCTTGTGCCAACCAC ACTCGACCCTGATATCACTTGGCAAACGGCTAGTTTCGGCGATTATGGGGCGCTCAAAGTTGAGCAAGATCAAGTCAGCT ATACCGAACAAGGCACGCCGCAGCAAATTTCATTACCTGATATGGTCGAAACCTTGAGCAATTATGCCAGCCTCGCCCCC AACGAATTGGTCGATCCACTACCTGGCGGCGGGGCAGCAGCACCAGCAGTTGAGCCACAAATTTTGCCGGCCCCAGCCCC TGAGTTGATCGATACCGATCCGAATGCCAACCCAGTTGCCCAAGTTGATGTTGCACCAACTATTGCACCAACTGCTGCTG CTCCAAGCTGGCTGCCGTGGGTTTTGGTTGGCGTAGGTGTGGTTGCCGCCATCGGCGCATTGATTGGCTGGCAACGCAGT CGTCGTGCCTAA
Upstream 100 bases:
>100_bases CGAGCACTAAGGAACTTCTTAGGCCCAGCCAACGTTATGGCTTTAAGCAAACCTTTACTATGCAACAAATTAAGCTAGTT TTATTTGAATGGAGTGTGTC
Downstream 100 bases:
>100_bases GGAGTAATCTGTATGCGTTGGATTTGGGGATGTTTGATCATATTAATCGTGCTGCTGCCTGCAACTCCTGCCGCTGCTTG CTCGATGATCGAGCCAACCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MRWMFGFFATCLALWQISPAAACKMIEPTLDSVTQQSELVVIATVTKIEGSQATFSVEAPIKGNLPQNDLDVLNHQINNG ADCQPTLGDGERFAEGSRWVLFLVPTTLDPDITWQTASFGDYGALKVEQDQVSYTEQGTPQQISLPDMVETLSNYASLAP NELVDPLPGGGAAAPAVEPQILPAPAPELIDTDPNANPVAQVDVAPTIAPTAAAPSWLPWVLVGVGVVAAIGALIGWQRS RRA
Sequences:
>Translated_243_residues MRWMFGFFATCLALWQISPAAACKMIEPTLDSVTQQSELVVIATVTKIEGSQATFSVEAPIKGNLPQNDLDVLNHQINNG ADCQPTLGDGERFAEGSRWVLFLVPTTLDPDITWQTASFGDYGALKVEQDQVSYTEQGTPQQISLPDMVETLSNYASLAP NELVDPLPGGGAAAPAVEPQILPAPAPELIDTDPNANPVAQVDVAPTIAPTAAAPSWLPWVLVGVGVVAAIGALIGWQRS RRA >Mature_243_residues MRWMFGFFATCLALWQISPAAACKMIEPTLDSVTQQSELVVIATVTKIEGSQATFSVEAPIKGNLPQNDLDVLNHQINNG ADCQPTLGDGERFAEGSRWVLFLVPTTLDPDITWQTASFGDYGALKVEQDQVSYTEQGTPQQISLPDMVETLSNYASLAP NELVDPLPGGGAAAPAVEPQILPAPAPELIDTDPNANPVAQVDVAPTIAPTAAAPSWLPWVLVGVGVVAAIGALIGWQRS RRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25800; Mature: 25800
Theoretical pI: Translated: 3.88; Mature: 3.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWMFGFFATCLALWQISPAAACKMIEPTLDSVTQQSELVVIATVTKIEGSQATFSVEAP CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEEECC IKGNLPQNDLDVLNHQINNGADCQPTLGDGERFAEGSRWVLFLVPTTLDPDITWQTASFG CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCEEEEEECCCCCCCCEEEECCCC DYGALKVEQDQVSYTEQGTPQQISLPDMVETLSNYASLAPNELVDPLPGGGAAAPAVEPQ CCCEEEEEHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCC ILPAPAPELIDTDPNANPVAQVDVAPTIAPTAAAPSWLPWVLVGVGVVAAIGALIGWQRS CCCCCCCHHCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RRA CCC >Mature Secondary Structure MRWMFGFFATCLALWQISPAAACKMIEPTLDSVTQQSELVVIATVTKIEGSQATFSVEAP CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEEECC IKGNLPQNDLDVLNHQINNGADCQPTLGDGERFAEGSRWVLFLVPTTLDPDITWQTASFG CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCEEEEEECCCCCCCCEEEECCCC DYGALKVEQDQVSYTEQGTPQQISLPDMVETLSNYASLAPNELVDPLPGGGAAAPAVEPQ CCCEEEEEHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCC ILPAPAPELIDTDPNANPVAQVDVAPTIAPTAAAPSWLPWVLVGVGVVAAIGALIGWQRS CCCCCCCHHCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RRA CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA