| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896608
Identifier: 159896608
GI number: 159896608
Start: 97351
End: 98661
Strand: Direct
Name: 159896608
Synonym: Haur_0075
Alternate gene names: NA
Gene position: 97351-98661 (Clockwise)
Preceding gene: 159896607
Following gene: 159896613
Centisome position: 1.53
GC content: 51.18
Gene sequence:
>1311_bases ATGATTCCATCGCGCCGTTTATTAGCACTTTTGCTAGCAGGCTTGGTTCCGGTGATCATCGGAGCAGCAACCCCCAGTTT GCGCTGGACAATCTGGGTTTATGTATTGTTGCTGATTGGCTTTGTGGCGCTTGATTGGTTTATGACTCCCAAGCCTAAAT TGTTGGAAGTAGCGCGGATCAACGAGCCAAAACTTTCAATTGGCGAACAAAACCTGATCACGCTGGCAGTGCATAATCAA AGCCCGCGCACGCTCGAAATTCAAATTCGTGATGAGTTTCCGGTGGAGTTTCCCAGCGATACGCTGATTCTTAAAACCAA GGTCGAGCCAGATACGGTGCAAGAGGTTAACTACCATGTACGGCCCTTGCGGCGTGGTGATTATCGCTTTGGCAATATCA ATTTGCGCTATACCAGCACCTTTGGTACGTTCTTGCGCCAAACCAAAATCGCCTTCGACGAATTGGTCAAGGTTTATCCC AATGTGCTTGATGTGCGCAAATACGATATGTTGGCGCGGAAGGGCATGCTGTTTGAGTTGGGGTTGCGCACCGCCCGCGT GTTTGGCTCAGGTACCGAGTTTGAGCGCTTGCGTGAATATACGCCCGATGATGAGTTTCGCTCGATTAACTGGAAGGCCA GCGCTCGCCGTAACAAGCTGATTGCTGCCGAATATGAGACCGAGCGTTCGCAGTATGTAGTGTCGGTGATCGACACTGGG CGTTTGATGCGCCCAACAATCAACGATATCGCCAAGCTGGATTATGCGATCAATGCCTCGTTAATGCTGGGGTATGTGGC GATGCTCAAAGGCGATCACATCGGCATGCTTTCGTTTGCCGACCATGTTGGGCGTTTTTTGCAGCCGCGCCGTGGTAAAG CCCAGTTTTATCAAATGTTGGAGATGTTGTATAACTTGCCATCGCAGCCCGTCGAGGCCGATTATGGCCGCGCGATCTCC TACTTGGGCTTGAAGAATAAGCGCCGTTCGTTAATTGTGATTTTTACCGACCTCAGCACCATGGATACCGCCAAGCCGCT GATTCAGCATATGGCACGCTTGGCCAAAACCCACCTCGCCTTGTGTGTGGTGATGAGCGACCCCAACTTAGTCGGCTATG CTGGCAAAGCGGCCTATAGTTCCACCGATGTGTATGAACGCGCCGTGGCCGAGATGGTGCTTGATGAACGGCGGGTAGTG CTCGACACGCTGAATCAAGCTGGCGTACATACGATCGACGTGCCAGCCAACAAACTAACGGTTTCGGTGATTAATAAATA TCTGGAGTTCAAAGGGCGAGGGCTTATTTAA
Upstream 100 bases:
>100_bases ATCGCCATCGGATTATTTTGAAACCAGAGGCTGAGATTGAAGGTTTGACCCCAGATACCGCGATGACCCGGATTTTGGGG CGTATTGAGGTTCCTCGCTG
Downstream 100 bases:
>100_bases CCGCCAATCACGGGGCTACTCTGCCCCGTGACGGCGTGGTTCATAATAGAATCAGCACCAGAATAAACATGCTGACTACG CCTCCGAGGGCAATCCCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MIPSRRLLALLLAGLVPVIIGAATPSLRWTIWVYVLLLIGFVALDWFMTPKPKLLEVARINEPKLSIGEQNLITLAVHNQ SPRTLEIQIRDEFPVEFPSDTLILKTKVEPDTVQEVNYHVRPLRRGDYRFGNINLRYTSTFGTFLRQTKIAFDELVKVYP NVLDVRKYDMLARKGMLFELGLRTARVFGSGTEFERLREYTPDDEFRSINWKASARRNKLIAAEYETERSQYVVSVIDTG RLMRPTINDIAKLDYAINASLMLGYVAMLKGDHIGMLSFADHVGRFLQPRRGKAQFYQMLEMLYNLPSQPVEADYGRAIS YLGLKNKRRSLIVIFTDLSTMDTAKPLIQHMARLAKTHLALCVVMSDPNLVGYAGKAAYSSTDVYERAVAEMVLDERRVV LDTLNQAGVHTIDVPANKLTVSVINKYLEFKGRGLI
Sequences:
>Translated_436_residues MIPSRRLLALLLAGLVPVIIGAATPSLRWTIWVYVLLLIGFVALDWFMTPKPKLLEVARINEPKLSIGEQNLITLAVHNQ SPRTLEIQIRDEFPVEFPSDTLILKTKVEPDTVQEVNYHVRPLRRGDYRFGNINLRYTSTFGTFLRQTKIAFDELVKVYP NVLDVRKYDMLARKGMLFELGLRTARVFGSGTEFERLREYTPDDEFRSINWKASARRNKLIAAEYETERSQYVVSVIDTG RLMRPTINDIAKLDYAINASLMLGYVAMLKGDHIGMLSFADHVGRFLQPRRGKAQFYQMLEMLYNLPSQPVEADYGRAIS YLGLKNKRRSLIVIFTDLSTMDTAKPLIQHMARLAKTHLALCVVMSDPNLVGYAGKAAYSSTDVYERAVAEMVLDERRVV LDTLNQAGVHTIDVPANKLTVSVINKYLEFKGRGLI >Mature_436_residues MIPSRRLLALLLAGLVPVIIGAATPSLRWTIWVYVLLLIGFVALDWFMTPKPKLLEVARINEPKLSIGEQNLITLAVHNQ SPRTLEIQIRDEFPVEFPSDTLILKTKVEPDTVQEVNYHVRPLRRGDYRFGNINLRYTSTFGTFLRQTKIAFDELVKVYP NVLDVRKYDMLARKGMLFELGLRTARVFGSGTEFERLREYTPDDEFRSINWKASARRNKLIAAEYETERSQYVVSVIDTG RLMRPTINDIAKLDYAINASLMLGYVAMLKGDHIGMLSFADHVGRFLQPRRGKAQFYQMLEMLYNLPSQPVEADYGRAIS YLGLKNKRRSLIVIFTDLSTMDTAKPLIQHMARLAKTHLALCVVMSDPNLVGYAGKAAYSSTDVYERAVAEMVLDERRVV LDTLNQAGVHTIDVPANKLTVSVINKYLEFKGRGLI
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49609; Mature: 49609
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPSRRLLALLLAGLVPVIIGAATPSLRWTIWVYVLLLIGFVALDWFMTPKPKLLEVARI CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEC NEPKLSIGEQNLITLAVHNQSPRTLEIQIRDEFPVEFPSDTLILKTKVEPDTVQEVNYHV CCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCHHHHCCCEE RPLRRGDYRFGNINLRYTSTFGTFLRQTKIAFDELVKVYPNVLDVRKYDMLARKGMLFEL CCCCCCCEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEH GLRTARVFGSGTEFERLREYTPDDEFRSINWKASARRNKLIAAEYETERSQYVVSVIDTG HHHHHHHCCCCCHHHHHHCCCCCCHHEECCCCCCCCCCCEEEEECCCCCCCEEEEEECCC RLMRPTINDIAKLDYAINASLMLGYVAMLKGDHIGMLSFADHVGRFLQPRRGKAQFYQML CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHH EMLYNLPSQPVEADYGRAISYLGLKNKRRSLIVIFTDLSTMDTAKPLIQHMARLAKTHLA HHHHCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHEE LCVVMSDPNLVGYAGKAAYSSTDVYERAVAEMVLDERRVVLDTLNQAGVHTIDVPANKLT EEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEECCCCHHH VSVINKYLEFKGRGLI HHHHHHHHHCCCCCCC >Mature Secondary Structure MIPSRRLLALLLAGLVPVIIGAATPSLRWTIWVYVLLLIGFVALDWFMTPKPKLLEVARI CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEC NEPKLSIGEQNLITLAVHNQSPRTLEIQIRDEFPVEFPSDTLILKTKVEPDTVQEVNYHV CCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCHHHHCCCEE RPLRRGDYRFGNINLRYTSTFGTFLRQTKIAFDELVKVYPNVLDVRKYDMLARKGMLFEL CCCCCCCEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEH GLRTARVFGSGTEFERLREYTPDDEFRSINWKASARRNKLIAAEYETERSQYVVSVIDTG HHHHHHHCCCCCHHHHHHCCCCCCHHEECCCCCCCCCCCEEEEECCCCCCCEEEEEECCC RLMRPTINDIAKLDYAINASLMLGYVAMLKGDHIGMLSFADHVGRFLQPRRGKAQFYQML CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHH EMLYNLPSQPVEADYGRAISYLGLKNKRRSLIVIFTDLSTMDTAKPLIQHMARLAKTHLA HHHHCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHEE LCVVMSDPNLVGYAGKAAYSSTDVYERAVAEMVLDERRVVLDTLNQAGVHTIDVPANKLT EEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEECCCCHHH VSVINKYLEFKGRGLI HHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA