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The map label for this gene is 159896598

Identifier: 159896598

GI number: 159896598

Start: 84367

End: 85875

Strand: Direct

Name: 159896598

Synonym: Haur_0065

Alternate gene names: NA

Gene position: 84367-85875 (Clockwise)

Preceding gene: 159896597

Following gene: 159896599

Centisome position: 1.33

GC content: 53.81

Gene sequence:

>1509_bases
ATGATGCTTGCACGTTGGCGTTGGCATCCCCTCACAACGCTTGGGCTGAGTGGGCTGGCGGCCTTGGCAATTGTGGCGCT
CTATCGGCCCAAACGCTTTGTGCCATTGATTGGCATTGATGAGGCGGCTGCGCATAATTTGCTGTTTGCGCTAGCGTTGT
TGGTGTTATTTGCCCTACTGGCTTGGCTGCGACCCGAAATTGGCTTGGCTGGAGTGGCCGCGACGATTCCGTTTAACTAT
CGCTCACGCGGCTTTTGGGATGGCAACTACCCATTTATTGATGGCAAATATTTCCCGTTGCACGAGTTGTTGCTGTTGGT
CGTCTTGGGTGTTACGGCGCTCGATGTTGGTTGGCGCTTGATCCAACGCCAAATCGCATGGCAAATGTGGTGGCGTGAAC
ATTGGCGCATGCTGCTGTTGCCCTTGGCTTGGCTGCTTGTGGCTACATTTGCGGCAAACTTGGCCGTGCCCGAAGGTCAA
GCTGAGGCATGGCGCGAATGGCGTTGGATGATTATCGAGCCATTGTTGCTGTATGGCTTGATTTTGTATTGGCAACCACG
CTACCCAGTGCGGCGCTGGTTACTTTGGGGTTTGCTAGCTGGCAGCGTAATTGTGGCGATCATTGGCATTTTGCAGTGGC
GCGACCTCGATTGGACTCCGATTGATGGTACGGGCATGTGCTTTAGCGATTTGATTGTTGATTCTGGCGGCACAAAACGC
ACATCATCGGTCTACTGCCACCCCAATAATTTGGCCTTGTGGATGGATCGCGCCAGTATGTTGGCGGTTGTCGCGGCAGC
ATGGGCCTGCTGGCAATGGTGGCGCAAACGCACCTGGCAAACGGCTATATGGTCGTTGCTCTATCTTGGGGCCAGCAGCT
TGTTGCTATTAAGTTTGATGCTAACCTATTCCAAGGGGGCACGGTTTGCAGTGGCCTTGGTATTGATTGGCCTAAGCTGT
TTGCCGCGCCGCTGGTGGCTACCGCTGATCACGAGCGCTGTGCTTGGTGGTTTGTTGCTTTATTCGTCGTTGAGTGGTCC
TGAGCGCTTGAACGTGACGGGCGATTCCAGTTCGGCGCGTTTGAGTATTTGGCGCTCAGCCACGGCGATGATTATTGATC
ATCCAATTGTAGGCATTGGGCTTGATCAATTTTATTTCTATTTCAATCCACAATTCAATCGTGGCTATATCGAGCCACGC
CTTGCCGCCGACCCTGCCGAGCGTAACACCGCCCATCCGCACAATTTGCTACTCGATTTGTGGTTGCGGGTTGGGATTGC
GGGAGTGCTTATTTTTGCGGCGTTGGCGTGGCGCAGCCTGCGGCGCACTTGGCAAATTTGGCATAGCGAGCAGCCTGAGC
GCTGGTTGGCGTTAGCGGCTTTGGCGGCCTTGATGGCTGGCTGGTTGCATGGCGGCGTTGATCAAGGCTATTTCTCCAGC
GATTTAGCAATGGTGACATGGTTAACCCTAGGGATGATCGATAGCTTCACCCTAAAAGGTCAAAATTGA

Upstream 100 bases:

>100_bases
CATGGTGGTGGCTGTGGGCTAGCATTCCGTTTGGGCTTTGGCTGGGTTTGTTGCTAGCGCTGAAGCGTTTTTATCGCGTC
CTAGTGCGAAAGAGAACTGT

Downstream 100 bases:

>100_bases
CTGAAAATAGCAGAATAGTCCTATTGAAAAATGGGACTATTGCGCTATAGTCTCTAATTAATGGTTTTTAATATTTTGCT
CTGACTTTGCTTGAACTTGC

Product: O-antigen polymerase

Products: NA

Alternate protein names: O-Antigen Polymerase Family

Number of amino acids: Translated: 502; Mature: 502

Protein sequence:

>502_residues
MMLARWRWHPLTTLGLSGLAALAIVALYRPKRFVPLIGIDEAAAHNLLFALALLVLFALLAWLRPEIGLAGVAATIPFNY
RSRGFWDGNYPFIDGKYFPLHELLLLVVLGVTALDVGWRLIQRQIAWQMWWREHWRMLLLPLAWLLVATFAANLAVPEGQ
AEAWREWRWMIIEPLLLYGLILYWQPRYPVRRWLLWGLLAGSVIVAIIGILQWRDLDWTPIDGTGMCFSDLIVDSGGTKR
TSSVYCHPNNLALWMDRASMLAVVAAAWACWQWWRKRTWQTAIWSLLYLGASSLLLLSLMLTYSKGARFAVALVLIGLSC
LPRRWWLPLITSAVLGGLLLYSSLSGPERLNVTGDSSSARLSIWRSATAMIIDHPIVGIGLDQFYFYFNPQFNRGYIEPR
LAADPAERNTAHPHNLLLDLWLRVGIAGVLIFAALAWRSLRRTWQIWHSEQPERWLALAALAALMAGWLHGGVDQGYFSS
DLAMVTWLTLGMIDSFTLKGQN

Sequences:

>Translated_502_residues
MMLARWRWHPLTTLGLSGLAALAIVALYRPKRFVPLIGIDEAAAHNLLFALALLVLFALLAWLRPEIGLAGVAATIPFNY
RSRGFWDGNYPFIDGKYFPLHELLLLVVLGVTALDVGWRLIQRQIAWQMWWREHWRMLLLPLAWLLVATFAANLAVPEGQ
AEAWREWRWMIIEPLLLYGLILYWQPRYPVRRWLLWGLLAGSVIVAIIGILQWRDLDWTPIDGTGMCFSDLIVDSGGTKR
TSSVYCHPNNLALWMDRASMLAVVAAAWACWQWWRKRTWQTAIWSLLYLGASSLLLLSLMLTYSKGARFAVALVLIGLSC
LPRRWWLPLITSAVLGGLLLYSSLSGPERLNVTGDSSSARLSIWRSATAMIIDHPIVGIGLDQFYFYFNPQFNRGYIEPR
LAADPAERNTAHPHNLLLDLWLRVGIAGVLIFAALAWRSLRRTWQIWHSEQPERWLALAALAALMAGWLHGGVDQGYFSS
DLAMVTWLTLGMIDSFTLKGQN
>Mature_502_residues
MMLARWRWHPLTTLGLSGLAALAIVALYRPKRFVPLIGIDEAAAHNLLFALALLVLFALLAWLRPEIGLAGVAATIPFNY
RSRGFWDGNYPFIDGKYFPLHELLLLVVLGVTALDVGWRLIQRQIAWQMWWREHWRMLLLPLAWLLVATFAANLAVPEGQ
AEAWREWRWMIIEPLLLYGLILYWQPRYPVRRWLLWGLLAGSVIVAIIGILQWRDLDWTPIDGTGMCFSDLIVDSGGTKR
TSSVYCHPNNLALWMDRASMLAVVAAAWACWQWWRKRTWQTAIWSLLYLGASSLLLLSLMLTYSKGARFAVALVLIGLSC
LPRRWWLPLITSAVLGGLLLYSSLSGPERLNVTGDSSSARLSIWRSATAMIIDHPIVGIGLDQFYFYFNPQFNRGYIEPR
LAADPAERNTAHPHNLLLDLWLRVGIAGVLIFAALAWRSLRRTWQIWHSEQPERWLALAALAALMAGWLHGGVDQGYFSS
DLAMVTWLTLGMIDSFTLKGQN

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57024; Mature: 57024

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLARWRWHPLTTLGLSGLAALAIVALYRPKRFVPLIGIDEAAAHNLLFALALLVLFALL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHH
AWLRPEIGLAGVAATIPFNYRSRGFWDGNYPFIDGKYFPLHELLLLVVLGVTALDVGWRL
HHHCCCCCCCCEEEECCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHH
IQRQIAWQMWWREHWRMLLLPLAWLLVATFAANLAVPEGQAEAWREWRWMIIEPLLLYGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
ILYWQPRYPVRRWLLWGLLAGSVIVAIIGILQWRDLDWTPIDGTGMCFSDLIVDSGGTKR
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCC
TSSVYCHPNNLALWMDRASMLAVVAAAWACWQWWRKRTWQTAIWSLLYLGASSLLLLSLM
CCEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTYSKGARFAVALVLIGLSCLPRRWWLPLITSAVLGGLLLYSSLSGPERLNVTGDSSSAR
HHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCE
LSIWRSATAMIIDHPIVGIGLDQFYFYFNPQFNRGYIEPRLAADPAERNTAHPHNLLLDL
EEEHHCCEEEEEECCEEEEEHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
WLRVGIAGVLIFAALAWRSLRRTWQIWHSEQPERWLALAALAALMAGWLHGGVDQGYFSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
DLAMVTWLTLGMIDSFTLKGQN
HHHHHHHHHHHHHHCCEECCCC
>Mature Secondary Structure
MMLARWRWHPLTTLGLSGLAALAIVALYRPKRFVPLIGIDEAAAHNLLFALALLVLFALL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHH
AWLRPEIGLAGVAATIPFNYRSRGFWDGNYPFIDGKYFPLHELLLLVVLGVTALDVGWRL
HHHCCCCCCCCEEEECCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHH
IQRQIAWQMWWREHWRMLLLPLAWLLVATFAANLAVPEGQAEAWREWRWMIIEPLLLYGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
ILYWQPRYPVRRWLLWGLLAGSVIVAIIGILQWRDLDWTPIDGTGMCFSDLIVDSGGTKR
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCC
TSSVYCHPNNLALWMDRASMLAVVAAAWACWQWWRKRTWQTAIWSLLYLGASSLLLLSLM
CCEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTYSKGARFAVALVLIGLSCLPRRWWLPLITSAVLGGLLLYSSLSGPERLNVTGDSSSAR
HHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCE
LSIWRSATAMIIDHPIVGIGLDQFYFYFNPQFNRGYIEPRLAADPAERNTAHPHNLLLDL
EEEHHCCEEEEEECCEEEEEHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
WLRVGIAGVLIFAALAWRSLRRTWQIWHSEQPERWLALAALAALMAGWLHGGVDQGYFSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
DLAMVTWLTLGMIDSFTLKGQN
HHHHHHHHHHHHHHCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA