| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896597
Identifier: 159896597
GI number: 159896597
Start: 82736
End: 84370
Strand: Direct
Name: 159896597
Synonym: Haur_0064
Alternate gene names: NA
Gene position: 82736-84370 (Clockwise)
Preceding gene: 159896596
Following gene: 159896598
Centisome position: 1.3
GC content: 52.29
Gene sequence:
>1635_bases ATGGCCTGCGCTATGCAACGAAGCAGATTTTTTCAATTTCAATCACTCCTTTGGCTTTTGATCGCTGGGGTTTGCGCAGG CGGCCTCGCTGCTTGGTCGTGGCTTGAAAATGAGCAATGGCGCGGCGTTGCCACCAGTGTCGATCAACCAATTGCTTGGG CCAATGTGCCACAGGGTGGGGTCAATTTGCCCAGCCTGCACCTCGAATCACCCGAAGTTATTTCGCGTACCCTCGATACC GCCAAAGCCGCTGGGTTTTATTGGCTGCGCGTCCAATTTCCGTGGGAAGATATTGAGATTCACGCCAAAAACGATTTTCG CGATTATCGCCACGATTACAACGGCGATGGCATGGTCGATCAAACCGATGCGATTTCAGCGTGGACCAAATATGATGGGA TTGTTGCCGCTGCTCAAGCCCGTAATTTGCAACTAATCGTGCGACTCGATCGCCCGCCAAGCTGGGCCCGCCAAAACTTG CCCATGGACAGTTTTCGGGTCGCCAAACGCCAACAAGACCCTGGCTCGACTGGCCCACCCGATAACTATGGCGATTATGG CGATTATGTGACGGCTGTCGTCGAGCGCTATCGCGGCAAGGTGCGCTTCTTCCAAATTTGGAACGAGCCAAATTATGGCC ACGAATGGAATTGGGCTGATCCTAATCCTGACGAGTTTTTTAAATTGTTGCAGCTTGGCTATACCCGCGCCAAAGCTGCC AACCCTGATGCGATCATTCTTTTCCCAAGTTTGACTCCAGCTGATGGCTTCGATTGGCAAGCCATGAACGATCTGCAATT CTTGGAGCAGCTGTATCAACTTGGGGCCGCCGATTATTTTGATATTTTTACGGCCCAAGGCTATGGTTTAGGCCAACCTG CGACCGAAAATCGCTATGTGCGGCCATTGTTCAATGCCGATGGCTCGTTGCGCCGCGATACGCTTTGGCAACGCCCACTC GATTCGCGCACCGATGTCACACGGGTGGTCTTTCTGCGCGAAGTGATGGAGCGCTACGGCGATGCTCATAAGGCCGTTTG GATTAGCGAATTTGGCTGGAATAGCTCGGCGGTTGCCACCCAATATGGTCCACCAGTCAGCGAAGAGCAAAAAGCCCAAT ATTTGGTGGAATATCTGCAACGGGCACGCCAGCAATGGCCTTGGCTTGGGGCAATGAATATCTGGTTTTTACGACCTGGA GTCAACTTCTCGCCCGAAGATCCGACGATTCATTTTGCCTTGCTTAAAAACGATTGGACTGAATTGCCCGCCTACACCGC TGTCAAAGCTTACCTGACCCAAGCGCCGCAATTGGGGATTGGTCGCTATCAACCAAACGATTTGCTCTGGCAGCAAGGCG AATATAGCGCTAATTGGTGGGGCGAGCATTTAATCGTGCAAAGTGCTGGGCCAATTGAAGTAGTTGTTGATGGCCAAGTG CTTGCTGAGCCAGAATTTCGTGGTGAGCTAGGCCAGCATCAACTAGAAATTCGCGGTGATTGGCAAGCCCTAACGATTAG CCGTCAACGCGCATGGTGGTGGCTGTGGGCTAGCATTCCGTTTGGGCTTTGGCTGGGTTTGTTGCTAGCGCTGAAGCGTT TTTATCGCGTCCTAGTGCGAAAGAGAACTGTATGA
Upstream 100 bases:
>100_bases AGGTCGGAGGTTCGAATCCTCTCGCCCCGACCACCAATCACCGTTTTGGCGGTGATTTTTTGTTTTTAGGCTTTTGACAA GCCTGCAACGCTAGTTGATA
Downstream 100 bases:
>100_bases TGCTTGCACGTTGGCGTTGGCATCCCCTCACAACGCTTGGGCTGAGTGGGCTGGCGGCCTTGGCAATTGTGGCGCTCTAT CGGCCCAAACGCTTTGTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 544; Mature: 543
Protein sequence:
>544_residues MACAMQRSRFFQFQSLLWLLIAGVCAGGLAAWSWLENEQWRGVATSVDQPIAWANVPQGGVNLPSLHLESPEVISRTLDT AKAAGFYWLRVQFPWEDIEIHAKNDFRDYRHDYNGDGMVDQTDAISAWTKYDGIVAAAQARNLQLIVRLDRPPSWARQNL PMDSFRVAKRQQDPGSTGPPDNYGDYGDYVTAVVERYRGKVRFFQIWNEPNYGHEWNWADPNPDEFFKLLQLGYTRAKAA NPDAIILFPSLTPADGFDWQAMNDLQFLEQLYQLGAADYFDIFTAQGYGLGQPATENRYVRPLFNADGSLRRDTLWQRPL DSRTDVTRVVFLREVMERYGDAHKAVWISEFGWNSSAVATQYGPPVSEEQKAQYLVEYLQRARQQWPWLGAMNIWFLRPG VNFSPEDPTIHFALLKNDWTELPAYTAVKAYLTQAPQLGIGRYQPNDLLWQQGEYSANWWGEHLIVQSAGPIEVVVDGQV LAEPEFRGELGQHQLEIRGDWQALTISRQRAWWWLWASIPFGLWLGLLLALKRFYRVLVRKRTV
Sequences:
>Translated_544_residues MACAMQRSRFFQFQSLLWLLIAGVCAGGLAAWSWLENEQWRGVATSVDQPIAWANVPQGGVNLPSLHLESPEVISRTLDT AKAAGFYWLRVQFPWEDIEIHAKNDFRDYRHDYNGDGMVDQTDAISAWTKYDGIVAAAQARNLQLIVRLDRPPSWARQNL PMDSFRVAKRQQDPGSTGPPDNYGDYGDYVTAVVERYRGKVRFFQIWNEPNYGHEWNWADPNPDEFFKLLQLGYTRAKAA NPDAIILFPSLTPADGFDWQAMNDLQFLEQLYQLGAADYFDIFTAQGYGLGQPATENRYVRPLFNADGSLRRDTLWQRPL DSRTDVTRVVFLREVMERYGDAHKAVWISEFGWNSSAVATQYGPPVSEEQKAQYLVEYLQRARQQWPWLGAMNIWFLRPG VNFSPEDPTIHFALLKNDWTELPAYTAVKAYLTQAPQLGIGRYQPNDLLWQQGEYSANWWGEHLIVQSAGPIEVVVDGQV LAEPEFRGELGQHQLEIRGDWQALTISRQRAWWWLWASIPFGLWLGLLLALKRFYRVLVRKRTV >Mature_543_residues ACAMQRSRFFQFQSLLWLLIAGVCAGGLAAWSWLENEQWRGVATSVDQPIAWANVPQGGVNLPSLHLESPEVISRTLDTA KAAGFYWLRVQFPWEDIEIHAKNDFRDYRHDYNGDGMVDQTDAISAWTKYDGIVAAAQARNLQLIVRLDRPPSWARQNLP MDSFRVAKRQQDPGSTGPPDNYGDYGDYVTAVVERYRGKVRFFQIWNEPNYGHEWNWADPNPDEFFKLLQLGYTRAKAAN PDAIILFPSLTPADGFDWQAMNDLQFLEQLYQLGAADYFDIFTAQGYGLGQPATENRYVRPLFNADGSLRRDTLWQRPLD SRTDVTRVVFLREVMERYGDAHKAVWISEFGWNSSAVATQYGPPVSEEQKAQYLVEYLQRARQQWPWLGAMNIWFLRPGV NFSPEDPTIHFALLKNDWTELPAYTAVKAYLTQAPQLGIGRYQPNDLLWQQGEYSANWWGEHLIVQSAGPIEVVVDGQVL AEPEFRGELGQHQLEIRGDWQALTISRQRAWWWLWASIPFGLWLGLLLALKRFYRVLVRKRTV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62664; Mature: 62533
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACAMQRSRFFQFQSLLWLLIAGVCAGGLAAWSWLENEQWRGVATSVDQPIAWANVPQGG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCEECCCCCCC VNLPSLHLESPEVISRTLDTAKAAGFYWLRVQFPWEDIEIHAKNDFRDYRHDYNGDGMVD CCCCCEECCCHHHHHHHHHHHHHCCEEEEEEEECCCCEEEEECCCHHHHHCCCCCCCCCC QTDAISAWTKYDGIVAAAQARNLQLIVRLDRPPSWARQNLPMDSFRVAKRQQDPGSTGPP CHHHHHHHHHHCCEEEEECCCCEEEEEEECCCCCHHHHCCCHHHHHHHHHCCCCCCCCCC DNYGDYGDYVTAVVERYRGKVRFFQIWNEPNYGHEWNWADPNPDEFFKLLQLGYTRAKAA CCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCHHHCCC NPDAIILFPSLTPADGFDWQAMNDLQFLEQLYQLGAADYFDIFTAQGYGLGQPATENRYV CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHEECCCCCCCCCCCCCEE RPLFNADGSLRRDTLWQRPLDSRTDVTRVVFLREVMERYGDAHKAVWISEFGWNSSAVAT CEEECCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHEEEEEEECCCCCCCEEE QYGPPVSEEQKAQYLVEYLQRARQQWPWLGAMNIWFLRPGVNFSPEDPTIHFALLKNDWT CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCH ELPAYTAVKAYLTQAPQLGIGRYQPNDLLWQQGEYSANWWGEHLIVQSAGPIEVVVDGQV HCCHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCEEEEECCCCEEEEECCEE LAEPEFRGELGQHQLEIRGDWQALTISRQRAWWWLWASIPFGLWLGLLLALKRFYRVLVR EECCHHHCCCCCEEEEEECCEEEEEEECCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHH KRTV HCCC >Mature Secondary Structure ACAMQRSRFFQFQSLLWLLIAGVCAGGLAAWSWLENEQWRGVATSVDQPIAWANVPQGG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCEECCCCCCC VNLPSLHLESPEVISRTLDTAKAAGFYWLRVQFPWEDIEIHAKNDFRDYRHDYNGDGMVD CCCCCEECCCHHHHHHHHHHHHHCCEEEEEEEECCCCEEEEECCCHHHHHCCCCCCCCCC QTDAISAWTKYDGIVAAAQARNLQLIVRLDRPPSWARQNLPMDSFRVAKRQQDPGSTGPP CHHHHHHHHHHCCEEEEECCCCEEEEEEECCCCCHHHHCCCHHHHHHHHHCCCCCCCCCC DNYGDYGDYVTAVVERYRGKVRFFQIWNEPNYGHEWNWADPNPDEFFKLLQLGYTRAKAA CCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCHHHCCC NPDAIILFPSLTPADGFDWQAMNDLQFLEQLYQLGAADYFDIFTAQGYGLGQPATENRYV CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHEECCCCCCCCCCCCCEE RPLFNADGSLRRDTLWQRPLDSRTDVTRVVFLREVMERYGDAHKAVWISEFGWNSSAVAT CEEECCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHEEEEEEECCCCCCCEEE QYGPPVSEEQKAQYLVEYLQRARQQWPWLGAMNIWFLRPGVNFSPEDPTIHFALLKNDWT CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCH ELPAYTAVKAYLTQAPQLGIGRYQPNDLLWQQGEYSANWWGEHLIVQSAGPIEVVVDGQV HCCHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCEEEEECCCCEEEEECCEE LAEPEFRGELGQHQLEIRGDWQALTISRQRAWWWLWASIPFGLWLGLLLALKRFYRVLVR EECCHHHCCCCCEEEEEECCEEEEEEECCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHH KRTV HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA