| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896580
Identifier: 159896580
GI number: 159896580
Start: 62267
End: 63649
Strand: Direct
Name: 159896580
Synonym: Haur_0047
Alternate gene names: NA
Gene position: 62267-63649 (Clockwise)
Preceding gene: 159896579
Following gene: 159896581
Centisome position: 0.98
GC content: 50.61
Gene sequence:
>1383_bases ATGCATGAACGAATTGTGGCCTTTGTCAAGGCGCTGCGAGCAGCCGGAGTTCGTGTGTCGCTCGCCGAAAGCCTTGATAG TTTTAATGCCTTAGAACAGCTTGGCATCAGCGATCGCCAGCTTTTTCACGATGCGCTGTTGGCAACCTTGGTCAAAGATG CTAGCCAGCAAGCGCAGTTCGAGGAGCTATTTCCGCTTTTTTTTGGCCATGGCGATGCCCCGATGATCAGCGGAGCCAAT GGCTTGAGCGGGCTAGATCCCGACGAATTACAACAATTGCGCCAAGAAATTGCCCAATTGCGCGAACGGATTCGCGAATT AATGCAACGGCTGATGGATGGCCAAAATCTCACGCCTGAAGAATTGGCGGCACTAGCACGAAGTTCGGGCATCAATCACA TTCAATCGCTCAACCAACGCCGCTGGGTCGAACGGCGCATGGAACAACAAATGGGCCTGAATGAATTTAAACAGGCGCTG GAAGCTTTGCTCAAACAATTGGAAGAAGGCGGGATGGATGCCGCCGCCTTGGCCGAAATTATGCAGCAAATGCAGGGCAA TGCCCAAGCTATGCGCGACCAAATTAGCCAATTCGTTGGGTCGGGCTTAGCCGAGCGCATGAGCGACGACTACAATCCGC AAACTGGTGATGATCTCCAGCATCGGCCATTTGGCTCGCTCTCCGATGCTGATGTGCAGCGTATGCGTCAAGAAGTACGC CGTTTGGCGGCTTTGTTGCGCTCACGAGCAGCGTTGCGCCAAAAACGCGATAAAGCGGGTCAGGTTGATATCAAACGCAC CATGCGCAACAATATGCGCTACGACGGCGTGCCGATGAAATTGGAATATCGTAAAAAGCAACAAAAACCTAAATTGGTAA TTATTTGCGATATTTCGACCTCGATGCGACCTGTGGCTGAATTTATGCTGCGTATGATTTACGAACTGCAAGATCAAGTT AGCAAAACCCATTCATTTGCTTTTATCGCTAATTTGCACGACATTACCGAGCAATTGAATGATAGCCGCGCCGATATTAG CGTCAATGATGTGCTCGAAAGTATCCCGCCTGGCTACTACAACACCGACCTTGGTCATAGCCTCGATACGTTTTTGCATA GCCACCTTAGTACGGTCGATTGGCGTACTACGGTGATTATTGTGGGTGATGGCCGCAATAATTTCAACAATCCACGGCTG GAATCATTGCAAACAATTCGTCGCCATGCCAAGCGCTTAATCTGGTTTACTCCCGAAGATCGCTGGCAATGGGGCACTGG CGATAGCGATATGCAGCTCTACGCACCGCTTTGCGACCGTGTGCATCTCGTGACCAACTTGGCTGAATTAACGGCAGCGG TTGATCGGCTATTGGCTAACTAG
Upstream 100 bases:
>100_bases GGCAAAAGACCTCAAGCGATTAGAATCTGTCATCGATCCTAACTTCTCACTTTTTGACCTTTGACTTTTGCCTTCTGACT TTTCAAAGGGGGTTTTTACG
Downstream 100 bases:
>100_bases CTATTTAGCGAGCCACCTATAGGCCGTAGGTGGCTCATGCACCCTCTAGATTAATCCCCTCTGTGGTTGCTTTAATCCAC AATTAACCTGTGCTATAGTT
Product: VWA containing CoxE family protein
Products: NA
Alternate protein names: VWA Domain Containing CoxE-Like Protein; VWA Containing CoxE-Like; Carbon Monoxide Dehydrogenase CoxE Subunit; Carbon Monoxide Dehydrogenase CoxE Accessory Protein; VWA Containing CoxE-Like Protein; VWA Domain-Containing Protein; Vwa Domain Coxe-Like Protein; VWA Domain Protein; Von Willebrand Factor Type A Domain-Containing Protein
Number of amino acids: Translated: 460; Mature: 460
Protein sequence:
>460_residues MHERIVAFVKALRAAGVRVSLAESLDSFNALEQLGISDRQLFHDALLATLVKDASQQAQFEELFPLFFGHGDAPMISGAN GLSGLDPDELQQLRQEIAQLRERIRELMQRLMDGQNLTPEELAALARSSGINHIQSLNQRRWVERRMEQQMGLNEFKQAL EALLKQLEEGGMDAAALAEIMQQMQGNAQAMRDQISQFVGSGLAERMSDDYNPQTGDDLQHRPFGSLSDADVQRMRQEVR RLAALLRSRAALRQKRDKAGQVDIKRTMRNNMRYDGVPMKLEYRKKQQKPKLVIICDISTSMRPVAEFMLRMIYELQDQV SKTHSFAFIANLHDITEQLNDSRADISVNDVLESIPPGYYNTDLGHSLDTFLHSHLSTVDWRTTVIIVGDGRNNFNNPRL ESLQTIRRHAKRLIWFTPEDRWQWGTGDSDMQLYAPLCDRVHLVTNLAELTAAVDRLLAN
Sequences:
>Translated_460_residues MHERIVAFVKALRAAGVRVSLAESLDSFNALEQLGISDRQLFHDALLATLVKDASQQAQFEELFPLFFGHGDAPMISGAN GLSGLDPDELQQLRQEIAQLRERIRELMQRLMDGQNLTPEELAALARSSGINHIQSLNQRRWVERRMEQQMGLNEFKQAL EALLKQLEEGGMDAAALAEIMQQMQGNAQAMRDQISQFVGSGLAERMSDDYNPQTGDDLQHRPFGSLSDADVQRMRQEVR RLAALLRSRAALRQKRDKAGQVDIKRTMRNNMRYDGVPMKLEYRKKQQKPKLVIICDISTSMRPVAEFMLRMIYELQDQV SKTHSFAFIANLHDITEQLNDSRADISVNDVLESIPPGYYNTDLGHSLDTFLHSHLSTVDWRTTVIIVGDGRNNFNNPRL ESLQTIRRHAKRLIWFTPEDRWQWGTGDSDMQLYAPLCDRVHLVTNLAELTAAVDRLLAN >Mature_460_residues MHERIVAFVKALRAAGVRVSLAESLDSFNALEQLGISDRQLFHDALLATLVKDASQQAQFEELFPLFFGHGDAPMISGAN GLSGLDPDELQQLRQEIAQLRERIRELMQRLMDGQNLTPEELAALARSSGINHIQSLNQRRWVERRMEQQMGLNEFKQAL EALLKQLEEGGMDAAALAEIMQQMQGNAQAMRDQISQFVGSGLAERMSDDYNPQTGDDLQHRPFGSLSDADVQRMRQEVR RLAALLRSRAALRQKRDKAGQVDIKRTMRNNMRYDGVPMKLEYRKKQQKPKLVIICDISTSMRPVAEFMLRMIYELQDQV SKTHSFAFIANLHDITEQLNDSRADISVNDVLESIPPGYYNTDLGHSLDTFLHSHLSTVDWRTTVIIVGDGRNNFNNPRL ESLQTIRRHAKRLIWFTPEDRWQWGTGDSDMQLYAPLCDRVHLVTNLAELTAAVDRLLAN
Specific function: Unknown
COG id: COG3552
COG function: function code R; Protein containing von Willebrand factor type A (vWA) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52405; Mature: 52405
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHERIVAFVKALRAAGVRVSLAESLDSFNALEQLGISDRQLFHDALLATLVKDASQQAQF CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH EELFPLFFGHGDAPMISGANGLSGLDPDELQQLRQEIAQLRERIRELMQRLMDGQNLTPE HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH ELAALARSSGINHIQSLNQRRWVERRMEQQMGLNEFKQALEALLKQLEEGGMDAAALAEI HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH MQQMQGNAQAMRDQISQFVGSGLAERMSDDYNPQTGDDLQHRPFGSLSDADVQRMRQEVR HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH RLAALLRSRAALRQKRDKAGQVDIKRTMRNNMRYDGVPMKLEYRKKQQKPKLVIICDIST HHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCEEEEEECCC SMRPVAEFMLRMIYELQDQVSKTHSFAFIANLHDITEQLNDSRADISVNDVLESIPPGYY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCC NTDLGHSLDTFLHSHLSTVDWRTTVIIVGDGRNNFNNPRLESLQTIRRHAKRLIWFTPED CCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHEEEECCCC RWQWGTGDSDMQLYAPLCDRVHLVTNLAELTAAVDRLLAN CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHERIVAFVKALRAAGVRVSLAESLDSFNALEQLGISDRQLFHDALLATLVKDASQQAQF CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH EELFPLFFGHGDAPMISGANGLSGLDPDELQQLRQEIAQLRERIRELMQRLMDGQNLTPE HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH ELAALARSSGINHIQSLNQRRWVERRMEQQMGLNEFKQALEALLKQLEEGGMDAAALAEI HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH MQQMQGNAQAMRDQISQFVGSGLAERMSDDYNPQTGDDLQHRPFGSLSDADVQRMRQEVR HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH RLAALLRSRAALRQKRDKAGQVDIKRTMRNNMRYDGVPMKLEYRKKQQKPKLVIICDIST HHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCEEEEEECCC SMRPVAEFMLRMIYELQDQVSKTHSFAFIANLHDITEQLNDSRADISVNDVLESIPPGYY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCC NTDLGHSLDTFLHSHLSTVDWRTTVIIVGDGRNNFNNPRLESLQTIRRHAKRLIWFTPED CCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHEEEECCCC RWQWGTGDSDMQLYAPLCDRVHLVTNLAELTAAVDRLLAN CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA