| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896579
Identifier: 159896579
GI number: 159896579
Start: 61205
End: 62137
Strand: Direct
Name: 159896579
Synonym: Haur_0046
Alternate gene names: NA
Gene position: 61205-62137 (Clockwise)
Preceding gene: 159896578
Following gene: 159896580
Centisome position: 0.96
GC content: 50.05
Gene sequence:
>933_bases ATGGAAGAGCAACCGACGAAGCCTGTTAAGGATGGGCTGATCGCCCAAAGTTATATTCCAACCGATCAAATTGCCACGGT GTTGTATTTGGCTGATCGCTTGGAAAAGCCGTTATTGGCCGAAGGTCCAGCCGGGGTGGGTAAAACTGAGCTTGCCAAGG CTTGGGCTGCGGCAACTGGCCGCGAGTTGATTCGTTTGCAGTGCTATGAAGGGCTTGATGAAACCAAAGCGCTCTACGAG TGGGAATATGCCAAGCAAATGTTATATACCCAACTGCTGCGCGATAAACTCAATAATTTGCTTTCTGATGCCGATTCGTT GCGCTCCGCCGCCGATCGTCTGGCCGCCGAAGAAGAAGTGTTCTTCTCGCAGCGCTTTTTATTGCAACGTCCCTTGCTCA AGGCAATTCTCAATCCTAAACCTACGCTGCTCTTGATCGACGAAATTGATCGGGCCGATGCTGAGTTTGAGGCCTTTTTG CTCGAAGTACTATCGGATTTTCAAATTACTGTGCCTGAGCTTGGTACGCTCAAAGCAGCCCATCGGCCAATTGTGATTTT GACCAGCAACAATACGCGTGAGCTTTCCGAAGCCCTCAAGCGCCGTTGTATGTATTTATTTATTGGCTATCCTTCGCTCG AAGAAGAATTGCGAATCGTCGAGATGAAAGTGCCAGCCTTGGGAGCCAAATTGGCCCGCCAAGCGGTCGAATTTGTGCAA CGTTTGCGCAATCTTGATCTCAAAAAGTCGCCTTCAATCTCCGAAACGCTGGATTGGGCACGGGCTTTGGTGCTGCTCAA TGCCAAACAACTTGATCAGGATATCCTTGATCAAACCATGACCGTGCTTTTGAAGCATGAAAGCGACCTGCAACGCACCC AACGCGCCATCCAAACAGGCCGCAACCGCAACGACGAAGGACGAAGAAAGTAA
Upstream 100 bases:
>100_bases TTGATCAAAAAAGTGCTACACTTAACTTTGTGTGATTGTTACCCCTATCCCTACCCCAACTAAACCCAGTTTCCGCCAAG CCTACAGGAGCACAAAACCT
Downstream 100 bases:
>100_bases AATCAAAAGGCAAAAGTCAGAAATCAAAAGGCAAAAGACCTCAAGCGATTAGAATCTGTCATCGATCCTAACTTCTCACT TTTTGACCTTTGACTTTTGC
Product: ATPase
Products: NA
Alternate protein names: ATPase AAA Family; AAA ATPase Central Domain Protein; MoxR-Like ATPase; AAA_5 ATPase; AAA Family ATPase; ATPase AAA Family Protein; AAA ATPase; ATPase Associated With Various Cellular Activities; ATPase Central Domain-Containing Protein; Carbon Monoxide Dehydrogenase D Protein; Oxidoreductase; MoxR Family ATPase; ATP-Dependent Protease; ATPase Protein; Aaa ATPase; ATPase Associated With Various Cellular; Carbon Monoxide Dehydrogenase Accesory Protein; Chaperone ClpB; ClpA/ClpB Family Protein; Oligopeptide ABC Transporter; ATPase Aaa Family; Membrane Oxidoreductase; AAA ATPase Central RegionATPase; Carbon Monoxide Dehydrogenase CoxD Accessory Protein; AAA ATPase Family Protein; ATP-Dependent Protease LA Protein; MoxR-Like ATPase CoxD; CoxD-Like Protein; ATP-Dependent Protease Subunit
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MEEQPTKPVKDGLIAQSYIPTDQIATVLYLADRLEKPLLAEGPAGVGKTELAKAWAAATGRELIRLQCYEGLDETKALYE WEYAKQMLYTQLLRDKLNNLLSDADSLRSAADRLAAEEEVFFSQRFLLQRPLLKAILNPKPTLLLIDEIDRADAEFEAFL LEVLSDFQITVPELGTLKAAHRPIVILTSNNTRELSEALKRRCMYLFIGYPSLEEELRIVEMKVPALGAKLARQAVEFVQ RLRNLDLKKSPSISETLDWARALVLLNAKQLDQDILDQTMTVLLKHESDLQRTQRAIQTGRNRNDEGRRK
Sequences:
>Translated_310_residues MEEQPTKPVKDGLIAQSYIPTDQIATVLYLADRLEKPLLAEGPAGVGKTELAKAWAAATGRELIRLQCYEGLDETKALYE WEYAKQMLYTQLLRDKLNNLLSDADSLRSAADRLAAEEEVFFSQRFLLQRPLLKAILNPKPTLLLIDEIDRADAEFEAFL LEVLSDFQITVPELGTLKAAHRPIVILTSNNTRELSEALKRRCMYLFIGYPSLEEELRIVEMKVPALGAKLARQAVEFVQ RLRNLDLKKSPSISETLDWARALVLLNAKQLDQDILDQTMTVLLKHESDLQRTQRAIQTGRNRNDEGRRK >Mature_310_residues MEEQPTKPVKDGLIAQSYIPTDQIATVLYLADRLEKPLLAEGPAGVGKTELAKAWAAATGRELIRLQCYEGLDETKALYE WEYAKQMLYTQLLRDKLNNLLSDADSLRSAADRLAAEEEVFFSQRFLLQRPLLKAILNPKPTLLLIDEIDRADAEFEAFL LEVLSDFQITVPELGTLKAAHRPIVILTSNNTRELSEALKRRCMYLFIGYPSLEEELRIVEMKVPALGAKLARQAVEFVQ RLRNLDLKKSPSISETLDWARALVLLNAKQLDQDILDQTMTVLLKHESDLQRTQRAIQTGRNRNDEGRRK
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35273; Mature: 35273
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEQPTKPVKDGLIAQSYIPTDQIATVLYLADRLEKPLLAEGPAGVGKTELAKAWAAATG CCCCCCCHHHHCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH RELIRLQCYEGLDETKALYEWEYAKQMLYTQLLRDKLNNLLSDADSLRSAADRLAAEEEV HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFSQRFLLQRPLLKAILNPKPTLLLIDEIDRADAEFEAFLLEVLSDFQITVPELGTLKAA HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCEECCCCHHHHHHC HRPIVILTSNNTRELSEALKRRCMYLFIGYPSLEEELRIVEMKVPALGAKLARQAVEFVQ CCCEEEEECCCHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH RLRNLDLKKSPSISETLDWARALVLLNAKQLDQDILDQTMTVLLKHESDLQRTQRAIQTG HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RNRNDEGRRK CCCCCCCCCC >Mature Secondary Structure MEEQPTKPVKDGLIAQSYIPTDQIATVLYLADRLEKPLLAEGPAGVGKTELAKAWAAATG CCCCCCCHHHHCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH RELIRLQCYEGLDETKALYEWEYAKQMLYTQLLRDKLNNLLSDADSLRSAADRLAAEEEV HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFSQRFLLQRPLLKAILNPKPTLLLIDEIDRADAEFEAFLLEVLSDFQITVPELGTLKAA HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCEECCCCHHHHHHC HRPIVILTSNNTRELSEALKRRCMYLFIGYPSLEEELRIVEMKVPALGAKLARQAVEFVQ CCCEEEEECCCHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH RLRNLDLKKSPSISETLDWARALVLLNAKQLDQDILDQTMTVLLKHESDLQRTQRAIQTG HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RNRNDEGRRK CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA