| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896576
Identifier: 159896576
GI number: 159896576
Start: 52703
End: 53551
Strand: Reverse
Name: 159896576
Synonym: Haur_0043
Alternate gene names: NA
Gene position: 53551-52703 (Counterclockwise)
Preceding gene: 159896588
Following gene: 159896575
Centisome position: 0.84
GC content: 54.06
Gene sequence:
>849_bases GTGACAGAAATTCCCCAAATTGCTGTGGTTATTCCGGCCTTGAATGGCGAGATTACGGCCTTGCGGGCCTCGATTGCCCG CCAAACTTGGCAGCCCTGCCAAATTGAGGTTGCGGTCGGCGTGCGGCCCAATGGCAAAGCCCGTAATACTGCCACCGTGC GCACAACTGCGCCTTACCTCGTTTTTATTGATGATGATGCGATTTTAGCCAACGACGATGCGATTGAACAACTGGTCAAG CCTTTGCTCACCGATCCAACGATTGGCGTAACGGGAGCATCGAAACTCTTGCCGCCCGATGCTTCGACTTTTCAGCGTTG GGTTGCCCGCGAAGTTCCGCGCATTGAACATGCGATCGTGCCAACGCCACTCGAAAGCAATCCTGATCCGCCTTCGTTTT ATTGCGAATTGACCACGACCTGTTGCGCGATGCGGCGTGAAGTGTACGATGAAGTTGCTGGTTTCAACAACGAATTGATT CGCGGGGTTGATACTGAGTTTTTTACGCGGATTCGGCGGGCGGGCTATCGCTTTATTTTAGTCCCCAATACGTGGACGTG GCATCCGGCTCCGGCCAATTTGTGGGCACTGTTGCGCAAACACTGGTTGTATGGAGTTGGTCATGCCCAAGAGGTGCGGC GAGATTCGGCGCGTGGGCGAGGGCGCGTGCTCAAAACGCCGTTGCATGCCTTGGCCTATTGGCTGCTGCGCACGCTAATT TTGCCGATTAATATTTTTCTGCCCTACTCGTTTGCTGCGCCATCGTGGCGGCCCAGCTTCAAGCCCTTGAAGGCATTAAC CAGTTATGTTGGAGCCTTGGGCTATATTTGGGGTTGGTATCAGGTATGA
Upstream 100 bases:
>100_bases TAGAGGGTTCTGGCAACAAAACAACGGGACTCTAGCAGGTATTTCTTATCACCATGGTATATTAACCGCAACATTGCTGG TTTAGCTGAATGGATTGGTT
Downstream 100 bases:
>100_bases AACAAGCCACAATTGCCCTCGATTTACGTGTGCTCGACGACCACTTTCCGGGAATTGGGCGCTTTTGCTATGAATTAAGT TTAGCTTTATTGCAAACGCC
Product: cell wall biosynthesis glycosyltransferase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MTEIPQIAVVIPALNGEITALRASIARQTWQPCQIEVAVGVRPNGKARNTATVRTTAPYLVFIDDDAILANDDAIEQLVK PLLTDPTIGVTGASKLLPPDASTFQRWVAREVPRIEHAIVPTPLESNPDPPSFYCELTTTCCAMRREVYDEVAGFNNELI RGVDTEFFTRIRRAGYRFILVPNTWTWHPAPANLWALLRKHWLYGVGHAQEVRRDSARGRGRVLKTPLHALAYWLLRTLI LPINIFLPYSFAAPSWRPSFKPLKALTSYVGALGYIWGWYQV
Sequences:
>Translated_282_residues MTEIPQIAVVIPALNGEITALRASIARQTWQPCQIEVAVGVRPNGKARNTATVRTTAPYLVFIDDDAILANDDAIEQLVK PLLTDPTIGVTGASKLLPPDASTFQRWVAREVPRIEHAIVPTPLESNPDPPSFYCELTTTCCAMRREVYDEVAGFNNELI RGVDTEFFTRIRRAGYRFILVPNTWTWHPAPANLWALLRKHWLYGVGHAQEVRRDSARGRGRVLKTPLHALAYWLLRTLI LPINIFLPYSFAAPSWRPSFKPLKALTSYVGALGYIWGWYQV >Mature_281_residues TEIPQIAVVIPALNGEITALRASIARQTWQPCQIEVAVGVRPNGKARNTATVRTTAPYLVFIDDDAILANDDAIEQLVKP LLTDPTIGVTGASKLLPPDASTFQRWVAREVPRIEHAIVPTPLESNPDPPSFYCELTTTCCAMRREVYDEVAGFNNELIR GVDTEFFTRIRRAGYRFILVPNTWTWHPAPANLWALLRKHWLYGVGHAQEVRRDSARGRGRVLKTPLHALAYWLLRTLIL PINIFLPYSFAAPSWRPSFKPLKALTSYVGALGYIWGWYQV
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31759; Mature: 31628
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEIPQIAVVIPALNGEITALRASIARQTWQPCQIEVAVGVRPNGKARNTATVRTTAPYL CCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEEEECCCEE VFIDDDAILANDDAIEQLVKPLLTDPTIGVTGASKLLPPDASTFQRWVAREVPRIEHAIV EEECCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHCCC PTPLESNPDPPSFYCELTTTCCAMRREVYDEVAGFNNELIRGVDTEFFTRIRRAGYRFIL CCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHCCCEEEE VPNTWTWHPAPANLWALLRKHWLYGVGHAQEVRRDSARGRGRVLKTPLHALAYWLLRTLI CCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHH LPINIFLPYSFAAPSWRPSFKPLKALTSYVGALGYIWGWYQV HHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TEIPQIAVVIPALNGEITALRASIARQTWQPCQIEVAVGVRPNGKARNTATVRTTAPYL CCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEEEECCCEE VFIDDDAILANDDAIEQLVKPLLTDPTIGVTGASKLLPPDASTFQRWVAREVPRIEHAIV EEECCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHCCC PTPLESNPDPPSFYCELTTTCCAMRREVYDEVAGFNNELIRGVDTEFFTRIRRAGYRFIL CCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHCCCEEEE VPNTWTWHPAPANLWALLRKHWLYGVGHAQEVRRDSARGRGRVLKTPLHALAYWLLRTLI CCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHH LPINIFLPYSFAAPSWRPSFKPLKALTSYVGALGYIWGWYQV HHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA