| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896573
Identifier: 159896573
GI number: 159896573
Start: 49590
End: 51005
Strand: Direct
Name: 159896573
Synonym: Haur_0040
Alternate gene names: NA
Gene position: 49590-51005 (Clockwise)
Preceding gene: 159896572
Following gene: 159896574
Centisome position: 0.78
GC content: 50.49
Gene sequence:
>1416_bases GTGCATCATTTGCCAACGTTTCGTACATTAGGATTGCTTGGTTTGTTGGGGTTATTGTTGGTTGCCATACAACCGAGCCA AGCCCAACAACCACTATCACCAAAAATTAGGCCCGAGCCTAGCCTGAGCAATCGGCAGCCATTGCTTAGTGCAGCCCCGC AAGGTGGCAGTGAATGGCTGGTTCCTTGTGCTGCCAACGCTGAAAATTGGCAAAGTAGTGTGCGTGAAGATACAGCTGCG CTCAATTGCGAAATTTATGTGCCCGAATCGGCCATGATTTTTGTGATGGCGACCGGCAGTTTTAGCATGCAAACCAATGC TGTAACCAATACCTACGAAGGCCGAATTGGCCTAACCCTGGATGGAGTTTTGCGCGAGAGTAGCAATCGTTGGGGCAATG TTTATGCTTTAGGTCAACTCAATACTGGCGAAACCAGCATTTTTGCCAGCACCACGGTCTTTACGGCCAGTGCCGGGGTG CACACAGTGAGTTTAGTTGGGGGCTTTGTTGGTTATGGCCCGCTGACCTTGAACAACGCTCAACTAAGTGTTTTGGCCTT CCCAACCAACTCGGCTAATATTCGGGTTTGCGCCACCGATACGGGCTTAGGGGTCTGGCGAGCAACGCCAACCATGAGCA CCATTCGTTCGTGCAGCTTCAACTTGCCAAGTAATAGCACGGTATTTGTCAGCGCCGATGGTTCAGCTTTGCCAATTCCT GGCAACGAGGTAGCCTTGCAATTTCGCTTGGGCGTTGATGAGGCTACCACTGGCGATGTACGAACTGATCGCTATGTTGA TGTTGATAGCTTAGAACCAAATAATGAGCAAATCGATGGCAATGATATTTCGACTTCGATTGCCGCTAGCTTCAACCTAA CTGCTGGCAACCACACCATTAATTTCTTGGGAAATGGCAGTGGCAGCAATCAGGCCTATCTGTCGCGCTCAAGTTTGGCA GTGTTGGCCTTCCCGAGTGGTAGCCCATTCCGTACCTGCACCAGCATGAACGATACTAGTACCTTTTTCAGCAATAGCGA ATTTAGCTCATGGGCCAATTGTCTGTTGACCGTCTCTGGTGCTCATCGCGGGATTATCGTGGGCAATGTGACAGTTGGTC AGCAAAATGGCGAGCCGCAAGTCCGCACCCGTCTGCGAGCCAATACCGAGGTTGTGCTGGGTAGCACGCGCACCAGCGAT TTGACGATCTTCCGTATGGTTGGCGGTCAAGGCGATGACAAGACTATGACTTCGGTTGGCATGAGCGAATTGGCTGGCGG CCTGAATATCTTCAATTTTGATGGCTATCCATCCAACAGCAGCACCGTGCGCATGATCGATCCTAACATTCATGTACTAG CATTTCCCGACCCATTCAGGTATAAACAATACACGCCATTAGCGCTTGGCGAATAA
Upstream 100 bases:
>100_bases GGCATGTTGTGCTGGTAAAATTGTGCGCTTTACCATCCTTGCGCTGATCGGTCAATCTACAACGTGATGCCAGGTCATCT TTTTTGGAAGGGAGGAACAT
Downstream 100 bases:
>100_bases GTGTTAGCCTGTGGGGGATTCATGCGGGTCTATTTGATACGGCATGGTCAATCGGAAGAAAATGCCGCTGATTTAAAACG CTTAATTGGACTAGAAGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 471; Mature: 471
Protein sequence:
>471_residues MHHLPTFRTLGLLGLLGLLLVAIQPSQAQQPLSPKIRPEPSLSNRQPLLSAAPQGGSEWLVPCAANAENWQSSVREDTAA LNCEIYVPESAMIFVMATGSFSMQTNAVTNTYEGRIGLTLDGVLRESSNRWGNVYALGQLNTGETSIFASTTVFTASAGV HTVSLVGGFVGYGPLTLNNAQLSVLAFPTNSANIRVCATDTGLGVWRATPTMSTIRSCSFNLPSNSTVFVSADGSALPIP GNEVALQFRLGVDEATTGDVRTDRYVDVDSLEPNNEQIDGNDISTSIAASFNLTAGNHTINFLGNGSGSNQAYLSRSSLA VLAFPSGSPFRTCTSMNDTSTFFSNSEFSSWANCLLTVSGAHRGIIVGNVTVGQQNGEPQVRTRLRANTEVVLGSTRTSD LTIFRMVGGQGDDKTMTSVGMSELAGGLNIFNFDGYPSNSSTVRMIDPNIHVLAFPDPFRYKQYTPLALGE
Sequences:
>Translated_471_residues MHHLPTFRTLGLLGLLGLLLVAIQPSQAQQPLSPKIRPEPSLSNRQPLLSAAPQGGSEWLVPCAANAENWQSSVREDTAA LNCEIYVPESAMIFVMATGSFSMQTNAVTNTYEGRIGLTLDGVLRESSNRWGNVYALGQLNTGETSIFASTTVFTASAGV HTVSLVGGFVGYGPLTLNNAQLSVLAFPTNSANIRVCATDTGLGVWRATPTMSTIRSCSFNLPSNSTVFVSADGSALPIP GNEVALQFRLGVDEATTGDVRTDRYVDVDSLEPNNEQIDGNDISTSIAASFNLTAGNHTINFLGNGSGSNQAYLSRSSLA VLAFPSGSPFRTCTSMNDTSTFFSNSEFSSWANCLLTVSGAHRGIIVGNVTVGQQNGEPQVRTRLRANTEVVLGSTRTSD LTIFRMVGGQGDDKTMTSVGMSELAGGLNIFNFDGYPSNSSTVRMIDPNIHVLAFPDPFRYKQYTPLALGE >Mature_471_residues MHHLPTFRTLGLLGLLGLLLVAIQPSQAQQPLSPKIRPEPSLSNRQPLLSAAPQGGSEWLVPCAANAENWQSSVREDTAA LNCEIYVPESAMIFVMATGSFSMQTNAVTNTYEGRIGLTLDGVLRESSNRWGNVYALGQLNTGETSIFASTTVFTASAGV HTVSLVGGFVGYGPLTLNNAQLSVLAFPTNSANIRVCATDTGLGVWRATPTMSTIRSCSFNLPSNSTVFVSADGSALPIP GNEVALQFRLGVDEATTGDVRTDRYVDVDSLEPNNEQIDGNDISTSIAASFNLTAGNHTINFLGNGSGSNQAYLSRSSLA VLAFPSGSPFRTCTSMNDTSTFFSNSEFSSWANCLLTVSGAHRGIIVGNVTVGQQNGEPQVRTRLRANTEVVLGSTRTSD LTIFRMVGGQGDDKTMTSVGMSELAGGLNIFNFDGYPSNSSTVRMIDPNIHVLAFPDPFRYKQYTPLALGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50093; Mature: 50093
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHHLPTFRTLGLLGLLGLLLVAIQPSQAQQPLSPKIRPEPSLSNRQPLLSAAPQGGSEWL CCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCEE VPCAANAENWQSSVREDTAALNCEIYVPESAMIFVMATGSFSMQTNAVTNTYEGRIGLTL EEECCCCHHHHHHHHHCCEEEEEEEEECCCEEEEEEEECCCEEEECCCCEEECCEEEEEE DGVLRESSNRWGNVYALGQLNTGETSIFASTTVFTASAGVHTVSLVGGFVGYGPLTLNNA HHHHHCCCCCCCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEHHHHHCCCCEEECCC QLSVLAFPTNSANIRVCATDTGLGVWRATPTMSTIRSCSFNLPSNSTVFVSADGSALPIP EEEEEEECCCCCCEEEEEECCCCEEEECCCCHHHHHHCCCCCCCCCEEEEECCCCEECCC GNEVALQFRLGVDEATTGDVRTDRYVDVDSLEPNNEQIDGNDISTSIAASFNLTAGNHTI CCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCEECCCCCCEEEEEEEEEECCCEEE NFLGNGSGSNQAYLSRSSLAVLAFPSGSPFRTCTSMNDTSTFFSNSEFSSWANCLLTVSG EEEECCCCCCCEEEECCCEEEEECCCCCCCEEECCCCCCHHEECCCCHHCCEEEEEEECC AHRGIIVGNVTVGQQNGEPQVRTRLRANTEVVLGSTRTSDLTIFRMVGGQGDDKTMTSVG CCCEEEEEEEEECCCCCCHHHHHEECCCCEEEEECCCCCCEEEEEEECCCCCCCHHHHCC MSELAGGLNIFNFDGYPSNSSTVRMIDPNIHVLAFPDPFRYKQYTPLALGE HHHHCCCCEEEECCCCCCCCCEEEEECCCEEEEECCCCCCCCEECCCCCCC >Mature Secondary Structure MHHLPTFRTLGLLGLLGLLLVAIQPSQAQQPLSPKIRPEPSLSNRQPLLSAAPQGGSEWL CCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCEE VPCAANAENWQSSVREDTAALNCEIYVPESAMIFVMATGSFSMQTNAVTNTYEGRIGLTL EEECCCCHHHHHHHHHCCEEEEEEEEECCCEEEEEEEECCCEEEECCCCEEECCEEEEEE DGVLRESSNRWGNVYALGQLNTGETSIFASTTVFTASAGVHTVSLVGGFVGYGPLTLNNA HHHHHCCCCCCCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEHHHHHCCCCEEECCC QLSVLAFPTNSANIRVCATDTGLGVWRATPTMSTIRSCSFNLPSNSTVFVSADGSALPIP EEEEEEECCCCCCEEEEEECCCCEEEECCCCHHHHHHCCCCCCCCCEEEEECCCCEECCC GNEVALQFRLGVDEATTGDVRTDRYVDVDSLEPNNEQIDGNDISTSIAASFNLTAGNHTI CCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCEECCCCCCEEEEEEEEEECCCEEE NFLGNGSGSNQAYLSRSSLAVLAFPSGSPFRTCTSMNDTSTFFSNSEFSSWANCLLTVSG EEEECCCCCCCEEEECCCEEEEECCCCCCCEEECCCCCCHHEECCCCHHCCEEEEEEECC AHRGIIVGNVTVGQQNGEPQVRTRLRANTEVVLGSTRTSDLTIFRMVGGQGDDKTMTSVG CCCEEEEEEEEECCCCCCHHHHHEECCCCEEEEECCCCCCEEEEEEECCCCCCCHHHHCC MSELAGGLNIFNFDGYPSNSSTVRMIDPNIHVLAFPDPFRYKQYTPLALGE HHHHCCCCEEEECCCCCCCCCEEEEECCCEEEEECCCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA