Click here to switch to the map view.

The map label for this gene is korB [H]

Identifier: 159896571

GI number: 159896571

Start: 47511

End: 48557

Strand: Direct

Name: korB [H]

Synonym: Haur_0038

Alternate gene names: 159896571

Gene position: 47511-48557 (Clockwise)

Preceding gene: 159896570

Following gene: 159896572

Centisome position: 0.75

GC content: 50.24

Gene sequence:

>1047_bases
ATGGCAACGACCAAAGCGACTCCCAAGCCAAAAATTAACCTGCTTGGGTTTGAACAAGGTGAATACAAAGGCGCACCTTC
GACGCTGTGTCCCGGGTGTGGCCACGACTCAATCTCATCACGGATTGTTTCGGTTTGTTTCGAATTAGGTGTCCAGCCCT
ATCAAGTTGCTAAATTTAGCGGCATCGGCTGTTCATCAAAAACTCCGGCTTATTTCTTGGGCCGCTCGCACGGTTTCAAT
AGCGTTCACGGACGCATGCCTTCAGTTGCCACTGGCGCAATCGTCACCAACCGCAACTTGATCGGCTTGGCAGTGAGTGG
CGACGGCGATACTGGCTCAATCGGCATGGGCCAATTCAAGCATTTGGTGCGCCGTAACGTACCAATGGTCTATATCGTCG
AAAACAACGGCGTGTATGGCTTGACCAAAGGCCAATTCTCAGCAACCGCCGATATTGGCCAAAAGCTGAAATACGCAGGC
TTGAATGAACTCCCCCCAATTGATCTCTGTGCAGAAGCGATTATTGGTGGCGCAACTTTTGTTGCTCGTTCGTTCGCTGG
CGACCCACGCCAAGTTGAAGCCTTGTTGAAAGCTGCTTTGAGCCACCGTGGTTTGGCGATTCTCGATATCATCAGCCCAT
GTGTGACCTTCAACAACCATGAAGATTCAACCAAGAGCTACGCTTACGGCAAGGAACACGAAGAACGTCTGCACGACATG
ACCTTCATCCGCGCTCAAGAAGAAATCACGGTTGATTACGAAGAAGGCGAAGCAATTCCCGTCAAGATGCACGACGGCTC
AACGATTGTGCTCAAAAAACTTGAGAACGAGTACGATCCCACTAACCGCGTTGCTGCTTTGGCTCGCTTGGATGCCGCTC
GCGAAAACCAAGAGTTTATCACTGGCTTGATCTATGTGAATCAAAACAACAATCGTACTATCCACGATTTGTTGCACATG
GACGAACAGCCCTTGAGCCAACTCTCAGCCGAACAACTGCGCCCAAGCAAAGAAGCCCTCGAATCAGTCTTGGCTGATTT
GTACTAA

Upstream 100 bases:

>100_bases
AGAATTAGCTGGCCGGATTATTGCTGTTGCAAGCTGCGATGGCTTGCCATTAACCGCCCGCTGGGTGACTGAATCAGTAC
AAAAAGGGGAAGCATAGGCC

Downstream 100 bases:

>100_bases
TTCTGGTTTTGGCCTACCACCCCAGTTCTGGCGTTTGCTCAGGGCTGGGGTGGTTTTGATTTAAGGATGAAATATGAGGG
ATGAGGGATGAAAGCCAAAA

Product: 2-oxoglutarate ferredoxin oxidoreductase subunit beta

Products: NA

Alternate protein names: 2-ketoglutarate oxidoreductase beta chain; KOR; 2-oxoglutarate-ferredoxin oxidoreductase subunit beta [H]

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MATTKATPKPKINLLGFEQGEYKGAPSTLCPGCGHDSISSRIVSVCFELGVQPYQVAKFSGIGCSSKTPAYFLGRSHGFN
SVHGRMPSVATGAIVTNRNLIGLAVSGDGDTGSIGMGQFKHLVRRNVPMVYIVENNGVYGLTKGQFSATADIGQKLKYAG
LNELPPIDLCAEAIIGGATFVARSFAGDPRQVEALLKAALSHRGLAILDIISPCVTFNNHEDSTKSYAYGKEHEERLHDM
TFIRAQEEITVDYEEGEAIPVKMHDGSTIVLKKLENEYDPTNRVAALARLDAARENQEFITGLIYVNQNNNRTIHDLLHM
DEQPLSQLSAEQLRPSKEALESVLADLY

Sequences:

>Translated_348_residues
MATTKATPKPKINLLGFEQGEYKGAPSTLCPGCGHDSISSRIVSVCFELGVQPYQVAKFSGIGCSSKTPAYFLGRSHGFN
SVHGRMPSVATGAIVTNRNLIGLAVSGDGDTGSIGMGQFKHLVRRNVPMVYIVENNGVYGLTKGQFSATADIGQKLKYAG
LNELPPIDLCAEAIIGGATFVARSFAGDPRQVEALLKAALSHRGLAILDIISPCVTFNNHEDSTKSYAYGKEHEERLHDM
TFIRAQEEITVDYEEGEAIPVKMHDGSTIVLKKLENEYDPTNRVAALARLDAARENQEFITGLIYVNQNNNRTIHDLLHM
DEQPLSQLSAEQLRPSKEALESVLADLY
>Mature_347_residues
ATTKATPKPKINLLGFEQGEYKGAPSTLCPGCGHDSISSRIVSVCFELGVQPYQVAKFSGIGCSSKTPAYFLGRSHGFNS
VHGRMPSVATGAIVTNRNLIGLAVSGDGDTGSIGMGQFKHLVRRNVPMVYIVENNGVYGLTKGQFSATADIGQKLKYAGL
NELPPIDLCAEAIIGGATFVARSFAGDPRQVEALLKAALSHRGLAILDIISPCVTFNNHEDSTKSYAYGKEHEERLHDMT
FIRAQEEITVDYEEGEAIPVKMHDGSTIVLKKLENEYDPTNRVAALARLDAARENQEFITGLIYVNQNNNRTIHDLLHMD
EQPLSQLSAEQLRPSKEALESVLADLY

Specific function: Unknown

COG id: COG1013

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011766 [H]

Pfam domain/function: PF02775 TPP_enzyme_C [H]

EC number: =1.2.7.3 [H]

Molecular weight: Translated: 37840; Mature: 37709

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATTKATPKPKINLLGFEQGEYKGAPSTLCPGCGHDSISSRIVSVCFELGVQPYQVAKFS
CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEHEEC
GIGCSSKTPAYFLGRSHGFNSVHGRMPSVATGAIVTNRNLIGLAVSGDGDTGSIGMGQFK
CCCCCCCCCEEEEECCCCCCHHCCCCCCCCCCEEEECCCEEEEEEECCCCCCCCCHHHHH
HLVRRNVPMVYIVENNGVYGLTKGQFSATADIGQKLKYAGLNELPPIDLCAEAIIGGATF
HHHHCCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCHHHH
VARSFAGDPRQVEALLKAALSHRGLAILDIISPCVTFNNHEDSTKSYAYGKEHEERLHDM
HHHHHCCCHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCCCCCCCHHCCCCCHHHHHHHHH
TFIRAQEEITVDYEEGEAIPVKMHDGSTIVLKKLENEYDPTNRVAALARLDAARENQEFI
HHEEECCEEEEEECCCCEEEEEECCCCEEEEEEHHCCCCHHHHHHHHHHHHHHHCCCCEE
TGLIYVNQNNNRTIHDLLHMDEQPLSQLSAEQLRPSKEALESVLADLY
EEEEEEECCCCCCHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
ATTKATPKPKINLLGFEQGEYKGAPSTLCPGCGHDSISSRIVSVCFELGVQPYQVAKFS
CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEHEEC
GIGCSSKTPAYFLGRSHGFNSVHGRMPSVATGAIVTNRNLIGLAVSGDGDTGSIGMGQFK
CCCCCCCCCEEEEECCCCCCHHCCCCCCCCCCEEEECCCEEEEEEECCCCCCCCCHHHHH
HLVRRNVPMVYIVENNGVYGLTKGQFSATADIGQKLKYAGLNELPPIDLCAEAIIGGATF
HHHHCCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCHHHH
VARSFAGDPRQVEALLKAALSHRGLAILDIISPCVTFNNHEDSTKSYAYGKEHEERLHDM
HHHHHCCCHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCCCCCCCHHCCCCCHHHHHHHHH
TFIRAQEEITVDYEEGEAIPVKMHDGSTIVLKKLENEYDPTNRVAALARLDAARENQEFI
HHEEECCEEEEEECCCCEEEEEECCCCEEEEEEHHCCCCHHHHHHHHHHHHHHHCCCCEE
TGLIYVNQNNNRTIHDLLHMDEQPLSQLSAEQLRPSKEALESVLADLY
EEEEEEECCCCCCHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]