| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896564
Identifier: 159896564
GI number: 159896564
Start: 38809
End: 39813
Strand: Direct
Name: 159896564
Synonym: Haur_0031
Alternate gene names: NA
Gene position: 38809-39813 (Clockwise)
Preceding gene: 159896563
Following gene: 159896566
Centisome position: 0.61
GC content: 51.64
Gene sequence:
>1005_bases ATGACAACGACTGCTCAATTCCCAGAGGCTCGGCGTACTACGTCGGGAGCCGGAGCTATTTTGCGCCAATTTTGGGCCAC CAGCAAAGGCATGACGATCTTTTTCCTGCTTAGTTGCTTTTTCTTGGTGCTCGCAATCGCCGGGGTGACTGTTGACCCGC GTGAGGTGCTTGGCCAACCAGTTTGGATGAAAAGCCTAAAATTTGCGGTTTCGTTTGTGGTCTATGCGCCAACCGTTTTG TGGATGTTTAGCTATGTTAAGTTGCGGCCTCGTTTGATGCGTTTTGTGATGGATGCCTGTGCTGCTGCGCTTTCAATCGA AATTGTGTTATTTATTACCCAAGCTGTGCGCGGCCAACCAATGCACTTCAACGTCGCAACTCCCATTGATGAAACCTTAT GGAGCATCATGGGCACGACGATCACAGTCTTCTATCTGATTAATATTGTTGGATTTGTGGTTTTCCTGCGCCAAAAGCCA ATTGCTGATCGCGTTTTTATGCTCAGTTTGAAGTTGGGAATGGGCTTGATGCTGCTTGGCTTTGGGCTTGGCTTTTTGAT GACCAACCCCAGCCCTGCCCAAATGGAAGTGTTGCAAGCTGGCGGTTCGGTTCCCGCAATTGGTGCGCATACCGTCGGCG CTGCTGATGGCGGTCGTGGCATCGCGATTTTGGGCTGGAGCAGCGAGCATGGCGATTTACGGATCGCCCACTTTGTTGGC ATTCACGGGGCACAAGTGCTGGCTTTGATTGGCTGGTTGCTCTATAACGCCAAACAACGTTTCAACGATAAGCAACGTTT GGCCTTGACCTGGGGCGCAGCGGTCGCCTATCTCGGCCTCGTCGCCAGCGTGACGGTGCAAGCATTGCGTGGTCAAGCCC TGTTGCAACCTGATGCAACCACTTGGATCTCGTGGATTGGTTTGGTAGTTGGCAGTGTGTTGTTTACGAGTGTCGTTGTA AATCAGGGGTCAGTGGCGAGGGTTCAGGGTTCAGGTAGTTTTTAA
Upstream 100 bases:
>100_bases GGATTTTTGATCTATATGGTCGTGCGCACGATCCACGGTCTTGTTCGTTCACCCAACCTTACAACCATTGCTCAACCTGT AACTAAATAAAGGAACAGCC
Downstream 100 bases:
>100_bases CGCAGAGGACGAAGGGCTATGGGCTATATATAATGGTTCATTGGGTTGGTAATGATGACTATCCCTCACCCCCTAGCCCC CTCTCCCGCCCGCGAGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MTTTAQFPEARRTTSGAGAILRQFWATSKGMTIFFLLSCFFLVLAIAGVTVDPREVLGQPVWMKSLKFAVSFVVYAPTVL WMFSYVKLRPRLMRFVMDACAAALSIEIVLFITQAVRGQPMHFNVATPIDETLWSIMGTTITVFYLINIVGFVVFLRQKP IADRVFMLSLKLGMGLMLLGFGLGFLMTNPSPAQMEVLQAGGSVPAIGAHTVGAADGGRGIAILGWSSEHGDLRIAHFVG IHGAQVLALIGWLLYNAKQRFNDKQRLALTWGAAVAYLGLVASVTVQALRGQALLQPDATTWISWIGLVVGSVLFTSVVV NQGSVARVQGSGSF
Sequences:
>Translated_334_residues MTTTAQFPEARRTTSGAGAILRQFWATSKGMTIFFLLSCFFLVLAIAGVTVDPREVLGQPVWMKSLKFAVSFVVYAPTVL WMFSYVKLRPRLMRFVMDACAAALSIEIVLFITQAVRGQPMHFNVATPIDETLWSIMGTTITVFYLINIVGFVVFLRQKP IADRVFMLSLKLGMGLMLLGFGLGFLMTNPSPAQMEVLQAGGSVPAIGAHTVGAADGGRGIAILGWSSEHGDLRIAHFVG IHGAQVLALIGWLLYNAKQRFNDKQRLALTWGAAVAYLGLVASVTVQALRGQALLQPDATTWISWIGLVVGSVLFTSVVV NQGSVARVQGSGSF >Mature_333_residues TTTAQFPEARRTTSGAGAILRQFWATSKGMTIFFLLSCFFLVLAIAGVTVDPREVLGQPVWMKSLKFAVSFVVYAPTVLW MFSYVKLRPRLMRFVMDACAAALSIEIVLFITQAVRGQPMHFNVATPIDETLWSIMGTTITVFYLINIVGFVVFLRQKPI ADRVFMLSLKLGMGLMLLGFGLGFLMTNPSPAQMEVLQAGGSVPAIGAHTVGAADGGRGIAILGWSSEHGDLRIAHFVGI HGAQVLALIGWLLYNAKQRFNDKQRLALTWGAAVAYLGLVASVTVQALRGQALLQPDATTWISWIGLVVGSVLFTSVVVN QGSVARVQGSGSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36118; Mature: 35987
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTAQFPEARRTTSGAGAILRQFWATSKGMTIFFLLSCFFLVLAIAGVTVDPREVLGQP CCCCCCCCCHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCC VWMKSLKFAVSFVVYAPTVLWMFSYVKLRPRLMRFVMDACAAALSIEIVLFITQAVRGQP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC MHFNVATPIDETLWSIMGTTITVFYLINIVGFVVFLRQKPIADRVFMLSLKLGMGLMLLG EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH FGLGFLMTNPSPAQMEVLQAGGSVPAIGAHTVGAADGGRGIAILGWSSEHGDLRIAHFVG HHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECC IHGAQVLALIGWLLYNAKQRFNDKQRLALTWGAAVAYLGLVASVTVQALRGQALLQPDAT CCHHHHHHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHHHHHHHHHHCCCEEECCCHH TWISWIGLVVGSVLFTSVVVNQGSVARVQGSGSF HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC >Mature Secondary Structure TTTAQFPEARRTTSGAGAILRQFWATSKGMTIFFLLSCFFLVLAIAGVTVDPREVLGQP CCCCCCCCHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCC VWMKSLKFAVSFVVYAPTVLWMFSYVKLRPRLMRFVMDACAAALSIEIVLFITQAVRGQP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC MHFNVATPIDETLWSIMGTTITVFYLINIVGFVVFLRQKPIADRVFMLSLKLGMGLMLLG EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH FGLGFLMTNPSPAQMEVLQAGGSVPAIGAHTVGAADGGRGIAILGWSSEHGDLRIAHFVG HHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECC IHGAQVLALIGWLLYNAKQRFNDKQRLALTWGAAVAYLGLVASVTVQALRGQALLQPDAT CCHHHHHHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHHHHHHHHHHCCCEEECCCHH TWISWIGLVVGSVLFTSVVVNQGSVARVQGSGSF HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA