The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is dnaJ [H]

Identifier: 159896562

GI number: 159896562

Start: 37027

End: 38031

Strand: Reverse

Name: dnaJ [H]

Synonym: Haur_0029

Alternate gene names: 159896562

Gene position: 38031-37027 (Counterclockwise)

Preceding gene: 159896565

Following gene: 159896561

Centisome position: 0.6

GC content: 51.84

Gene sequence:

>1005_bases
ATGGATTACAAGGATTACTACACAATTCTTGGAGTAACAAAAACTGCAACCGAAGCTGAAATCAAAAAAGCCTATCGGAA
ATTGGCGCGTCAATATCACCCAGACCTCAATCCCGGCGATTCTGAAGCTGAACGTAAATTTAAAGAAATCAACGAAGCCT
ATGAGGTAGTGTCGGACAAAGACAAGCGAGAGAAGTACGATCGCTTCGGTGCCGATTGGGGACGCGCCCAAAGTACAGGT
TCGGGGTTTAATTGGAGTCAATACGCCTCGCAACCAGGTGGTTTTGGTAGCAACTTTGGCGGCGATTTCGCCAACGGTGA
GTTCTCCGATTTTTTCGAAATGTTGTTTGGCAATGCCAGCCGCCGCCAAACCAGCGGGGTCTATGGCAATCGCCGACCAC
AACGCGGCCAAAATGTTGAGCAAGCCATTGATGTTACTTTAGCTGAAGTGCTCAGTGGTACCCAACGCACGCTGCAATTG
CAAGCACCCGAAATGTGTAGCAATTGTGGTGGCAGTGGGGCCAGCCGTGGTAGTATTTGCCCAACCTGTGGCGGTACTGG
TGTGAGCGGCACAAGCACTCGCACGATCAATGTGCGCATTCCTGCCGGAGTCGATCAAGGCTCACGCATTCGCGTTGCTG
GCGAAGGCAGCCCTGGCATCGACCAAGGCAAACGTGGCGATTTGATGTTGGTGGTCAATCTCGTGCCCGATAGTCGCTTC
GAGCGCAAAGGCAACGATTTACATACCGATCTCGCAGTCGATTGGCATACCCTCATCCTTGGCGGCAAAATAAAAGTTCC
ATTGCCTGATGGCAAGCAATTAACCTTAACGGTGCCTGAACAGACCCAAAATGCTAAAGTGTTTCGTTTGCGCGGCCAGG
GCGTGCCCAGCCTGCGCGATCAGAACACTCGCGGCGATTTGTTGGTCAAAGTTCAGGCAGTGCTACCAACCAGCCTGACT
CCCAAACAGCGCGAATTGGTAATGGCTCTACGGGACAGCGAATAA

Upstream 100 bases:

>100_bases
ATGTTAGAAATTAGCCGTTAACGTTGCATTATCTTGACATGCCATGGTGAGCGACGTATGATCAAATCACGTTCAGAAGT
TCGCACTAGAAGGGGTTGTA

Downstream 100 bases:

>100_bases
TGTCAGAAGGCAAAAATCAAAAGGCAAAAGGGTTTTGACTTCTGCCTTTTGACTTTTGATTTTGACAAAGGGTTTTTATA
TGAAGTTAGAACGATTTACC

Product: heat shock protein DnaJ domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MDYKDYYTILGVTKTATEAEIKKAYRKLARQYHPDLNPGDSEAERKFKEINEAYEVVSDKDKREKYDRFGADWGRAQSTG
SGFNWSQYASQPGGFGSNFGGDFANGEFSDFFEMLFGNASRRQTSGVYGNRRPQRGQNVEQAIDVTLAEVLSGTQRTLQL
QAPEMCSNCGGSGASRGSICPTCGGTGVSGTSTRTINVRIPAGVDQGSRIRVAGEGSPGIDQGKRGDLMLVVNLVPDSRF
ERKGNDLHTDLAVDWHTLILGGKIKVPLPDGKQLTLTVPEQTQNAKVFRLRGQGVPSLRDQNTRGDLLVKVQAVLPTSLT
PKQRELVMALRDSE

Sequences:

>Translated_334_residues
MDYKDYYTILGVTKTATEAEIKKAYRKLARQYHPDLNPGDSEAERKFKEINEAYEVVSDKDKREKYDRFGADWGRAQSTG
SGFNWSQYASQPGGFGSNFGGDFANGEFSDFFEMLFGNASRRQTSGVYGNRRPQRGQNVEQAIDVTLAEVLSGTQRTLQL
QAPEMCSNCGGSGASRGSICPTCGGTGVSGTSTRTINVRIPAGVDQGSRIRVAGEGSPGIDQGKRGDLMLVVNLVPDSRF
ERKGNDLHTDLAVDWHTLILGGKIKVPLPDGKQLTLTVPEQTQNAKVFRLRGQGVPSLRDQNTRGDLLVKVQAVLPTSLT
PKQRELVMALRDSE
>Mature_334_residues
MDYKDYYTILGVTKTATEAEIKKAYRKLARQYHPDLNPGDSEAERKFKEINEAYEVVSDKDKREKYDRFGADWGRAQSTG
SGFNWSQYASQPGGFGSNFGGDFANGEFSDFFEMLFGNASRRQTSGVYGNRRPQRGQNVEQAIDVTLAEVLSGTQRTLQL
QAPEMCSNCGGSGASRGSICPTCGGTGVSGTSTRTINVRIPAGVDQGSRIRVAGEGSPGIDQGKRGDLMLVVNLVPDSRF
ERKGNDLHTDLAVDWHTLILGGKIKVPLPDGKQLTLTVPEQTQNAKVFRLRGQGVPSLRDQNTRGDLLVKVQAVLPTSLT
PKQRELVMALRDSE

Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon

COG id: COG0484

COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Homo sapiens, GI205360838, Length=354, Percent_Identity=28.8135593220339, Blast_Score=143, Evalue=3e-34,
Organism=Homo sapiens, GI205360840, Length=354, Percent_Identity=28.8135593220339, Blast_Score=142, Evalue=3e-34,
Organism=Homo sapiens, GI7706495, Length=346, Percent_Identity=29.7687861271676, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI4504511, Length=375, Percent_Identity=28.2666666666667, Blast_Score=135, Evalue=7e-32,
Organism=Homo sapiens, GI201862587, Length=358, Percent_Identity=28.7709497206704, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI56549115, Length=359, Percent_Identity=28.6908077994429, Blast_Score=130, Evalue=1e-30,
Organism=Homo sapiens, GI201862518, Length=358, Percent_Identity=28.7709497206704, Blast_Score=130, Evalue=1e-30,
Organism=Homo sapiens, GI194328758, Length=359, Percent_Identity=28.133704735376, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI194328760, Length=359, Percent_Identity=28.6908077994429, Blast_Score=129, Evalue=3e-30,
Organism=Homo sapiens, GI6631085, Length=355, Percent_Identity=26.7605633802817, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI5031741, Length=361, Percent_Identity=27.9778393351801, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI39204547, Length=334, Percent_Identity=26.6467065868263, Blast_Score=109, Evalue=4e-24,
Organism=Homo sapiens, GI5453690, Length=353, Percent_Identity=25.2124645892351, Blast_Score=108, Evalue=7e-24,
Organism=Homo sapiens, GI27151736, Length=108, Percent_Identity=49.0740740740741, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI88501736, Length=108, Percent_Identity=49.0740740740741, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI194306642, Length=131, Percent_Identity=41.2213740458015, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI194306640, Length=131, Percent_Identity=41.2213740458015, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI194328762, Length=329, Percent_Identity=24.0121580547112, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI23503241, Length=114, Percent_Identity=48.2456140350877, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI17388799, Length=66, Percent_Identity=59.0909090909091, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI4885495, Length=66, Percent_Identity=59.0909090909091, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI47777312, Length=77, Percent_Identity=53.2467532467532, Blast_Score=82, Evalue=7e-16,
Organism=Homo sapiens, GI21553335, Length=69, Percent_Identity=53.6231884057971, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI9558755, Length=106, Percent_Identity=46.2264150943396, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI24308127, Length=85, Percent_Identity=43.5294117647059, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI45504382, Length=65, Percent_Identity=53.8461538461538, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI56687498, Length=120, Percent_Identity=41.6666666666667, Blast_Score=79, Evalue=9e-15,
Organism=Homo sapiens, GI29126218, Length=65, Percent_Identity=53.8461538461538, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI72534740, Length=140, Percent_Identity=36.4285714285714, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI22749377, Length=115, Percent_Identity=38.2608695652174, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI217035105, Length=73, Percent_Identity=43.8356164383562, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI1786197, Length=371, Percent_Identity=36.9272237196765, Blast_Score=220, Evalue=9e-59,
Organism=Escherichia coli, GI1787235, Length=331, Percent_Identity=34.1389728096677, Blast_Score=161, Evalue=5e-41,
Organism=Caenorhabditis elegans, GI17534355, Length=347, Percent_Identity=29.3948126801153, Blast_Score=134, Evalue=9e-32,
Organism=Caenorhabditis elegans, GI17553096, Length=367, Percent_Identity=29.1553133514986, Blast_Score=130, Evalue=1e-30,
Organism=Caenorhabditis elegans, GI17553098, Length=367, Percent_Identity=29.1553133514986, Blast_Score=129, Evalue=1e-30,
Organism=Caenorhabditis elegans, GI17507263, Length=361, Percent_Identity=26.5927977839335, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17554644, Length=100, Percent_Identity=48, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI212645553, Length=69, Percent_Identity=55.0724637681159, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17538236, Length=121, Percent_Identity=39.6694214876033, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI86563276, Length=115, Percent_Identity=40.8695652173913, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI115532378, Length=67, Percent_Identity=49.2537313432836, Blast_Score=73, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI115532476, Length=67, Percent_Identity=50.7462686567164, Blast_Score=71, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17568643, Length=65, Percent_Identity=56.9230769230769, Blast_Score=71, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17554900, Length=65, Percent_Identity=46.1538461538462, Blast_Score=71, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17563890, Length=66, Percent_Identity=51.5151515151515, Blast_Score=65, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6324265, Length=356, Percent_Identity=30.8988764044944, Blast_Score=127, Evalue=2e-30,
Organism=Saccharomyces cerevisiae, GI6323870, Length=370, Percent_Identity=28.1081081081081, Blast_Score=112, Evalue=6e-26,
Organism=Saccharomyces cerevisiae, GI6321094, Length=391, Percent_Identity=29.923273657289, Blast_Score=108, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6323119, Length=401, Percent_Identity=26.1845386533666, Blast_Score=92, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6324252, Length=419, Percent_Identity=21.9570405727924, Blast_Score=87, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6320888, Length=132, Percent_Identity=41.6666666666667, Blast_Score=81, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6322194, Length=122, Percent_Identity=42.6229508196721, Blast_Score=80, Evalue=4e-16,
Organism=Saccharomyces cerevisiae, GI6323813, Length=125, Percent_Identity=44.8, Blast_Score=80, Evalue=6e-16,
Organism=Saccharomyces cerevisiae, GI6324321, Length=69, Percent_Identity=52.1739130434783, Blast_Score=76, Evalue=9e-15,
Organism=Saccharomyces cerevisiae, GI6322388, Length=114, Percent_Identity=38.5964912280702, Blast_Score=69, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6324103, Length=63, Percent_Identity=55.5555555555556, Blast_Score=67, Evalue=6e-12,
Organism=Drosophila melanogaster, GI85726398, Length=366, Percent_Identity=30.6010928961749, Blast_Score=138, Evalue=6e-33,
Organism=Drosophila melanogaster, GI45549272, Length=389, Percent_Identity=28.7917737789203, Blast_Score=131, Evalue=5e-31,
Organism=Drosophila melanogaster, GI45552813, Length=389, Percent_Identity=28.7917737789203, Blast_Score=131, Evalue=5e-31,
Organism=Drosophila melanogaster, GI45552811, Length=381, Percent_Identity=28.3464566929134, Blast_Score=131, Evalue=6e-31,
Organism=Drosophila melanogaster, GI19920464, Length=348, Percent_Identity=27.5862068965517, Blast_Score=126, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24646562, Length=366, Percent_Identity=28.6885245901639, Blast_Score=119, Evalue=3e-27,
Organism=Drosophila melanogaster, GI24646560, Length=366, Percent_Identity=28.6885245901639, Blast_Score=119, Evalue=3e-27,
Organism=Drosophila melanogaster, GI24646558, Length=366, Percent_Identity=28.6885245901639, Blast_Score=119, Evalue=3e-27,
Organism=Drosophila melanogaster, GI24646556, Length=366, Percent_Identity=28.6885245901639, Blast_Score=119, Evalue=3e-27,
Organism=Drosophila melanogaster, GI21357547, Length=366, Percent_Identity=28.6885245901639, Blast_Score=119, Evalue=3e-27,
Organism=Drosophila melanogaster, GI24658562, Length=341, Percent_Identity=26.6862170087977, Blast_Score=117, Evalue=8e-27,
Organism=Drosophila melanogaster, GI24658555, Length=341, Percent_Identity=26.6862170087977, Blast_Score=117, Evalue=8e-27,
Organism=Drosophila melanogaster, GI20129487, Length=372, Percent_Identity=27.6881720430108, Blast_Score=112, Evalue=3e-25,
Organism=Drosophila melanogaster, GI24584014, Length=372, Percent_Identity=27.6881720430108, Blast_Score=112, Evalue=3e-25,
Organism=Drosophila melanogaster, GI18858081, Length=366, Percent_Identity=29.5081967213115, Blast_Score=112, Evalue=4e-25,
Organism=Drosophila melanogaster, GI24654066, Length=69, Percent_Identity=56.5217391304348, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24654070, Length=69, Percent_Identity=56.5217391304348, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24654068, Length=69, Percent_Identity=56.5217391304348, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24654072, Length=69, Percent_Identity=56.5217391304348, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI161077138, Length=64, Percent_Identity=57.8125, Blast_Score=81, Evalue=9e-16,
Organism=Drosophila melanogaster, GI17737735, Length=65, Percent_Identity=55.3846153846154, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24668523, Length=65, Percent_Identity=55.3846153846154, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI28574723, Length=65, Percent_Identity=55.3846153846154, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI21358273, Length=119, Percent_Identity=41.1764705882353, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24668492, Length=69, Percent_Identity=47.8260869565217, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24641698, Length=91, Percent_Identity=42.8571428571429, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24641696, Length=91, Percent_Identity=42.8571428571429, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24584630, Length=69, Percent_Identity=50.7246376811594, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI17648033, Length=69, Percent_Identity=50.7246376811594, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21357687, Length=65, Percent_Identity=44.6153846153846, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24651436, Length=66, Percent_Identity=42.4242424242424, Blast_Score=65, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012724
- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095
- InterPro:   IPR001305 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG [H]

EC number: NA

Molecular weight: Translated: 36544; Mature: 36544

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MDYKDYYTILGVTKTATEAEIKKAYRKLARQYHPDLNPGDSEAERKFKEINEAYEVVSDK
CCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCH
DKREKYDRFGADWGRAQSTGSGFNWSQYASQPGGFGSNFGGDFANGEFSDFFEMLFGNAS
HHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC
RRQTSGVYGNRRPQRGQNVEQAIDVTLAEVLSGTQRTLQLQAPEMCSNCGGSGASRGSIC
CHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECHHHHHCCCCCCCCCCCCC
PTCGGTGVSGTSTRTINVRIPAGVDQGSRIRVAGEGSPGIDQGKRGDLMLVVNLVPDSRF
CCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCHH
ERKGNDLHTDLAVDWHTLILGGKIKVPLPDGKQLTLTVPEQTQNAKVFRLRGQGVPSLRD
HHCCCCCCCEEEEEEEEEEECCEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCCCCCC
QNTRGDLLVKVQAVLPTSLTPKQRELVMALRDSE
CCCCCCEEEEEEEECCCCCCCHHHHHEEEEECCC
>Mature Secondary Structure
MDYKDYYTILGVTKTATEAEIKKAYRKLARQYHPDLNPGDSEAERKFKEINEAYEVVSDK
CCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCH
DKREKYDRFGADWGRAQSTGSGFNWSQYASQPGGFGSNFGGDFANGEFSDFFEMLFGNAS
HHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC
RRQTSGVYGNRRPQRGQNVEQAIDVTLAEVLSGTQRTLQLQAPEMCSNCGGSGASRGSIC
CHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECHHHHHCCCCCCCCCCCCC
PTCGGTGVSGTSTRTINVRIPAGVDQGSRIRVAGEGSPGIDQGKRGDLMLVVNLVPDSRF
CCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCHH
ERKGNDLHTDLAVDWHTLILGGKIKVPLPDGKQLTLTVPEQTQNAKVFRLRGQGVPSLRD
HHCCCCCCCEEEEEEEEEEECCEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCCCCCC
QNTRGDLLVKVQAVLPTSLTPKQRELVMALRDSE
CCCCCCEEEEEEEECCCCCCCHHHHHEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA