| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896560
Identifier: 159896560
GI number: 159896560
Start: 33570
End: 34424
Strand: Direct
Name: 159896560
Synonym: Haur_0027
Alternate gene names: NA
Gene position: 33570-34424 (Clockwise)
Preceding gene: 159896559
Following gene: 159896563
Centisome position: 0.53
GC content: 52.4
Gene sequence:
>855_bases ATGAGCCACATTTTGCCCGCTTGGCACCGCGAATTGCGGCGCAACCAGACGCTTAATCAATGGGGCTTTCGTTGGCATTC ACAACGCCGATTAAGCCGCACGCCAGCCCGTGCCGATGGCTTGATCAGCTTGGGTTCTTGCCCTTCAGTCACCACCCGCC ATACCCGAGCCAGTATTTTGCTTGATCCGAGCCAACCACAGCAGCTTTGGCTGGATTTTTGTGGCGAGCCAGACGCACCA CGCTTAAGCTGTGAACCAAGTTTCGACGCGCTCAGTCTGGTCTATCAACGCTATTTTCAGCGCTTCAATGGGCGGCCTCA ATCCCGCGGAATCAATCTGTTGCGTCAGGTGGTGCAATTGCGCTCCCAGCCAGCCCCGTTTGATCTGGCAACATTTTTGG GCGATGGCTATCATCAATTTCATCTGTTTTTGGGCTTGATCGATGATCAAACGATTATCGAGTTGGAAAATTCAATGGTG TTTAACCCATGGCTGAGCTTGCAGGCCTTGGCCTTGGATTCAGGCAGTGGTTGCGGCTATTCGCAATACCGCACCGCCTT CTCTGGCTCGATTTTGACCATGGAATTTAATCGTCAATTCGTAACCAAAGATGCAGCCTGTATTGCGCGAATCGCTTATC ACCCAGTACCTGTGGCCGAGCAAGCTAGCGTGCAACGCTGGCAAATGCAAAACCCCGCCAATGTTGTAGCAACCCTGCCG CAAGCTGTGCCATTTGATGTGTTGGGGTTGTATCATCATCTCGATTGGCAATGGTGGCAAACTGCCGAACATGCGCAATC GATGGCTGCTGAAGGCGATAAGCATGCGGCGATTGTGGTGCGTTTGTTGACTTAA
Upstream 100 bases:
>100_bases TGGCTCGCGAAGGCCAATAATTGGTTTGTAAAGGTCAATCCCTGACACACCCAACGACTATCCTACAAGGGTAGTCGTTT TTTCGTGCAAGGAGCCTGCT
Downstream 100 bases:
>100_bases ACCATTCAGCGGTCGGGAAGCAACTTCCCGACCGCTGTTTCGATACAAGTTTGGTTAGGCTGAAAGTGGCTCAACTGGCT TGCTACTGGTAATTTGCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MSHILPAWHRELRRNQTLNQWGFRWHSQRRLSRTPARADGLISLGSCPSVTTRHTRASILLDPSQPQQLWLDFCGEPDAP RLSCEPSFDALSLVYQRYFQRFNGRPQSRGINLLRQVVQLRSQPAPFDLATFLGDGYHQFHLFLGLIDDQTIIELENSMV FNPWLSLQALALDSGSGCGYSQYRTAFSGSILTMEFNRQFVTKDAACIARIAYHPVPVAEQASVQRWQMQNPANVVATLP QAVPFDVLGLYHHLDWQWWQTAEHAQSMAAEGDKHAAIVVRLLT
Sequences:
>Translated_284_residues MSHILPAWHRELRRNQTLNQWGFRWHSQRRLSRTPARADGLISLGSCPSVTTRHTRASILLDPSQPQQLWLDFCGEPDAP RLSCEPSFDALSLVYQRYFQRFNGRPQSRGINLLRQVVQLRSQPAPFDLATFLGDGYHQFHLFLGLIDDQTIIELENSMV FNPWLSLQALALDSGSGCGYSQYRTAFSGSILTMEFNRQFVTKDAACIARIAYHPVPVAEQASVQRWQMQNPANVVATLP QAVPFDVLGLYHHLDWQWWQTAEHAQSMAAEGDKHAAIVVRLLT >Mature_283_residues SHILPAWHRELRRNQTLNQWGFRWHSQRRLSRTPARADGLISLGSCPSVTTRHTRASILLDPSQPQQLWLDFCGEPDAPR LSCEPSFDALSLVYQRYFQRFNGRPQSRGINLLRQVVQLRSQPAPFDLATFLGDGYHQFHLFLGLIDDQTIIELENSMVF NPWLSLQALALDSGSGCGYSQYRTAFSGSILTMEFNRQFVTKDAACIARIAYHPVPVAEQASVQRWQMQNPANVVATLPQ AVPFDVLGLYHHLDWQWWQTAEHAQSMAAEGDKHAAIVVRLLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32324; Mature: 32193
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHILPAWHRELRRNQTLNQWGFRWHSQRRLSRTPARADGLISLGSCPSVTTRHTRASIL CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCEEEEE LDPSQPQQLWLDFCGEPDAPRLSCEPSFDALSLVYQRYFQRFNGRPQSRGINLLRQVVQL ECCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH RSQPAPFDLATFLGDGYHQFHLFLGLIDDQTIIELENSMVFNPWLSLQALALDSGSGCGY HCCCCCCHHHHHHCCCHHEEEHEEEECCCCEEEEECCCEEECCCCCEEEEEEECCCCCCH SQYRTAFSGSILTMEFNRQFVTKDAACIARIAYHPVPVAEQASVQRWQMQNPANVVATLP HHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHCC QAVPFDVLGLYHHLDWQWWQTAEHAQSMAAEGDKHAAIVVRLLT CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEECC >Mature Secondary Structure SHILPAWHRELRRNQTLNQWGFRWHSQRRLSRTPARADGLISLGSCPSVTTRHTRASIL CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCEEEEE LDPSQPQQLWLDFCGEPDAPRLSCEPSFDALSLVYQRYFQRFNGRPQSRGINLLRQVVQL ECCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH RSQPAPFDLATFLGDGYHQFHLFLGLIDDQTIIELENSMVFNPWLSLQALALDSGSGCGY HCCCCCCHHHHHHCCCHHEEEHEEEECCCCEEEEECCCEEECCCCCEEEEEEECCCCCCH SQYRTAFSGSILTMEFNRQFVTKDAACIARIAYHPVPVAEQASVQRWQMQNPANVVATLP HHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHCC QAVPFDVLGLYHHLDWQWWQTAEHAQSMAAEGDKHAAIVVRLLT CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA