| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896555
Identifier: 159896555
GI number: 159896555
Start: 26163
End: 28562
Strand: Direct
Name: 159896555
Synonym: Haur_0022
Alternate gene names: NA
Gene position: 26163-28562 (Clockwise)
Preceding gene: 159896552
Following gene: 159896556
Centisome position: 0.41
GC content: 51.46
Gene sequence:
>2400_bases ATGGATTCGCAGCAACAGTTCACCGCTGCCTCGCATTTGACTGCCGATAATTTGCGTAGTATTGCGCATTCGATCTCGAT CAGTCAGGTGTCGCGGTTGTCGTTGCCGGAGATCGATGCCGTTGTTGACCAAATCTCGCGGGTCGTGCCTGCTGGTAATG TCCCCGGGGTGATTTTAAGTGGCTTGGCGAAGTTGACGGGCCGTCGTCCAGCAGGCAATGTCATTAAGCGCGATGTAAAT TTGCTGTTTCGTGGGGTTGAGCAAGCCCTCGATAAAGCGGTGTTTAGCACGTTCTTTGCTGGGCCGGCTGCGGTTATTTG GGGTTACCAAAAACTGCTCGAATTGGCTGGCAAAGATCCGCAAGATGCGTTTCCGGAAGGCACATGGCAGTTTTATGTGG GCTATGCCTTGCGCGAAGATACTGCCCGCCATGCCAACGAAACGATTGGCTTCGATGAAACCCTGAACGATCATAAAATT AATTTGCCACCAATCGACCGCATGACCGCTTGGGTTATGGCGGCGATTCATATTCTGCATAGTTACCCCGATTTGCTCGA AAACGAATGGCGTGAGCGCGTTTCGTTGGCCTTGCTGCGCGATCTGACCAAGGTTAATCCTGAAACTCGTCAGTTTGCCG ATTTATATAATCAATGGGAGCGCCAACGCCCTTATGGCCGTGGCCCCGATGTTCAATCGCAAGAAAATTATGCGCTGTAT CGCAAACGCAAATTCGATGAATTTATGGCCGAATCTACCCGCGATTTGCCCAAAGAAATTCGCGAACGTTGGGGCAAACA GTTTCAGCGTGCTCGCGAAATCGCCTTGCCAGCCTATCAACGCCAAATGGCCCTGGCAGCCTACCTTGATCCCACACCCT ACAACGAAAATATGGTAGCTTTGCCACGCCAAAGTTGGCATATTGGCTTAATTTGGCGCGGCCATTATTATTTGATTCCT GCTTGTGCGCCCAATAGCACTCGACCCAATGATGTAAGCAGTGTGCGCAGCCAAATTGCTGCCTTGTTAGCCAGCCCAGC CAACCATGCCCCAACTTCATTAATTCCTTTGGCAACCACCAAACGCACAATCTTGCCCAGCATTTTGGGTAAGTTGCGGC CTGAAACCAGCCAACAACTTGAGGCCTTGCGTTGTGCACCAATTTGGTTTAATGCTGATGGCCGACCGCGCCATTTGCCC TTAGCCGAGTTGCGCCTGACCGAACGTGGACTAGGCGACCACGGCCTGACCTTGATCGATACTGGCTCAAGTATGGTCTT TGATCAATCGCATATTTTCTTCGATGGCGCTTGGGGTTCAGCCGTCGCCGAAATTATGACCCTCGAAGCCTTGGCTTGGG CGGTCTATTTGCGTGGCCAACCAGCGCCAGTCGCGGGTACGGTACGCCCCTATGCACCCAATATTGAACTCAACGACGAA GAAAAACAGATTCTCGCTGATAGCCCCAAGATTGTGGCTGAAGCCAGCGCCGAATCAATCGGGGTTGATCTGAAGAAGAT TTTGGAATTGCGCAAGTTGTTCAAGCAGCGTAACGACCAAATTCGAATTACAGTTAACGATATTTTGGTGCTCTATCGGG CAATTCATGCGGTTTCCTACAAGCCTAATCCAGAGTTGCAAGCGTCATTGCAAGAAGCCTCCAACGATGCCAATCTCAAA GCAGCGGTCGAAGCAACGATCACGGCGTTCGAGGAATCGCTGGCTAATCCGGCAATTCTCATTCCGGTTGATGGCAGCAT TCCCAATCCCAGCGATCGACTGCACCCCATGACCTTCGAGGTTCCGCTGGAAGAGCTGGAAATTAGCAAATTGCATGAAC GCGCATTAAGTTTGCTCGATCAAGCGCGGCAAGAGTGGCGAGCGGAAGTCTGGGATACCTTTGAGGCAACCCAAAAGCAT TATTTGGCGACGATTGCTGGCTTTGGCGAGGTTTCAGCCCGCGCCAAAGATATTGCCCAATCGGGCGAAAGCACTTCGTC AGGAGCCTTGCGCTTGTTGGCCCACGTACCGATGGCTTTGCAACGCTTGCTCGATGCGATTCCTGGTAAGTTCGATGTGC TCAACGATTTGATCAAAGGCCGCGAGGTGCTTTCAAATGTGGGCGCGGTGGCCGATACCAGCTCATTAACCCGTTTTATC ACTGCCAAAGACGATAACGAGAAAAAAACCTTGGCTTGGGGTGTTATCACCGATGCCAATGGGGTAATGCACGTTTCGCT ACGCGACTTTCGCCCACATGTTGGCTTGTTTGTGGCTGCTGGACGACGCGATTTGGCCCGCCGGATCGCCAACGATTATC TTGAAAGCTATGTTAATGGTCTCAATCGCTTTATCAGTGAATTGACCAAAATTACCCAAGGCCGCCATAGTCGCCAATAA
Upstream 100 bases:
>100_bases CAAAACAGGCCCATTTTAATATTTTGACAGGCTGCCCACGCTCCTCTATCATGAGGTCATTAATTTTTCGCTATCGAGCA TGTGGTGTGGATGGGGTATC
Downstream 100 bases:
>100_bases CCAAGGAAGAACTTAGAATATAGATATAATGGTTCATGGATTAGCAATCAGTTTTCGTTCCCTCACCCCAACCCTCGCCC ACTGCGGCGGGCGAGGGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 799; Mature: 799
Protein sequence:
>799_residues MDSQQQFTAASHLTADNLRSIAHSISISQVSRLSLPEIDAVVDQISRVVPAGNVPGVILSGLAKLTGRRPAGNVIKRDVN LLFRGVEQALDKAVFSTFFAGPAAVIWGYQKLLELAGKDPQDAFPEGTWQFYVGYALREDTARHANETIGFDETLNDHKI NLPPIDRMTAWVMAAIHILHSYPDLLENEWRERVSLALLRDLTKVNPETRQFADLYNQWERQRPYGRGPDVQSQENYALY RKRKFDEFMAESTRDLPKEIRERWGKQFQRAREIALPAYQRQMALAAYLDPTPYNENMVALPRQSWHIGLIWRGHYYLIP ACAPNSTRPNDVSSVRSQIAALLASPANHAPTSLIPLATTKRTILPSILGKLRPETSQQLEALRCAPIWFNADGRPRHLP LAELRLTERGLGDHGLTLIDTGSSMVFDQSHIFFDGAWGSAVAEIMTLEALAWAVYLRGQPAPVAGTVRPYAPNIELNDE EKQILADSPKIVAEASAESIGVDLKKILELRKLFKQRNDQIRITVNDILVLYRAIHAVSYKPNPELQASLQEASNDANLK AAVEATITAFEESLANPAILIPVDGSIPNPSDRLHPMTFEVPLEELEISKLHERALSLLDQARQEWRAEVWDTFEATQKH YLATIAGFGEVSARAKDIAQSGESTSSGALRLLAHVPMALQRLLDAIPGKFDVLNDLIKGREVLSNVGAVADTSSLTRFI TAKDDNEKKTLAWGVITDANGVMHVSLRDFRPHVGLFVAAGRRDLARRIANDYLESYVNGLNRFISELTKITQGRHSRQ
Sequences:
>Translated_799_residues MDSQQQFTAASHLTADNLRSIAHSISISQVSRLSLPEIDAVVDQISRVVPAGNVPGVILSGLAKLTGRRPAGNVIKRDVN LLFRGVEQALDKAVFSTFFAGPAAVIWGYQKLLELAGKDPQDAFPEGTWQFYVGYALREDTARHANETIGFDETLNDHKI NLPPIDRMTAWVMAAIHILHSYPDLLENEWRERVSLALLRDLTKVNPETRQFADLYNQWERQRPYGRGPDVQSQENYALY RKRKFDEFMAESTRDLPKEIRERWGKQFQRAREIALPAYQRQMALAAYLDPTPYNENMVALPRQSWHIGLIWRGHYYLIP ACAPNSTRPNDVSSVRSQIAALLASPANHAPTSLIPLATTKRTILPSILGKLRPETSQQLEALRCAPIWFNADGRPRHLP LAELRLTERGLGDHGLTLIDTGSSMVFDQSHIFFDGAWGSAVAEIMTLEALAWAVYLRGQPAPVAGTVRPYAPNIELNDE EKQILADSPKIVAEASAESIGVDLKKILELRKLFKQRNDQIRITVNDILVLYRAIHAVSYKPNPELQASLQEASNDANLK AAVEATITAFEESLANPAILIPVDGSIPNPSDRLHPMTFEVPLEELEISKLHERALSLLDQARQEWRAEVWDTFEATQKH YLATIAGFGEVSARAKDIAQSGESTSSGALRLLAHVPMALQRLLDAIPGKFDVLNDLIKGREVLSNVGAVADTSSLTRFI TAKDDNEKKTLAWGVITDANGVMHVSLRDFRPHVGLFVAAGRRDLARRIANDYLESYVNGLNRFISELTKITQGRHSRQ >Mature_799_residues MDSQQQFTAASHLTADNLRSIAHSISISQVSRLSLPEIDAVVDQISRVVPAGNVPGVILSGLAKLTGRRPAGNVIKRDVN LLFRGVEQALDKAVFSTFFAGPAAVIWGYQKLLELAGKDPQDAFPEGTWQFYVGYALREDTARHANETIGFDETLNDHKI NLPPIDRMTAWVMAAIHILHSYPDLLENEWRERVSLALLRDLTKVNPETRQFADLYNQWERQRPYGRGPDVQSQENYALY RKRKFDEFMAESTRDLPKEIRERWGKQFQRAREIALPAYQRQMALAAYLDPTPYNENMVALPRQSWHIGLIWRGHYYLIP ACAPNSTRPNDVSSVRSQIAALLASPANHAPTSLIPLATTKRTILPSILGKLRPETSQQLEALRCAPIWFNADGRPRHLP LAELRLTERGLGDHGLTLIDTGSSMVFDQSHIFFDGAWGSAVAEIMTLEALAWAVYLRGQPAPVAGTVRPYAPNIELNDE EKQILADSPKIVAEASAESIGVDLKKILELRKLFKQRNDQIRITVNDILVLYRAIHAVSYKPNPELQASLQEASNDANLK AAVEATITAFEESLANPAILIPVDGSIPNPSDRLHPMTFEVPLEELEISKLHERALSLLDQARQEWRAEVWDTFEATQKH YLATIAGFGEVSARAKDIAQSGESTSSGALRLLAHVPMALQRLLDAIPGKFDVLNDLIKGREVLSNVGAVADTSSLTRFI TAKDDNEKKTLAWGVITDANGVMHVSLRDFRPHVGLFVAAGRRDLARRIANDYLESYVNGLNRFISELTKITQGRHSRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89176; Mature: 89176
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSQQQFTAASHLTADNLRSIAHSISISQVSRLSLPEIDAVVDQISRVVPAGNVPGVILS CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHH GLAKLTGRRPAGNVIKRDVNLLFRGVEQALDKAVFSTFFAGPAAVIWGYQKLLELAGKDP HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC QDAFPEGTWQFYVGYALREDTARHANETIGFDETLNDHKINLPPIDRMTAWVMAAIHILH CCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH SYPDLLENEWRERVSLALLRDLTKVNPETRQFADLYNQWERQRPYGRGPDVQSQENYALY HCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH RKRKFDEFMAESTRDLPKEIRERWGKQFQRAREIALPAYQRQMALAAYLDPTPYNENMVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEE LPRQSWHIGLIWRGHYYLIPACAPNSTRPNDVSSVRSQIAALLASPANHAPTSLIPLATT ECCCCCEEEEEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCC KRTILPSILGKLRPETSQQLEALRCAPIWFNADGRPRHLPLAELRLTERGLGDHGLTLID HHHHHHHHHHHCCCCHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHCCCCCCCEEEEE TGSSMVFDQSHIFFDGAWGSAVAEIMTLEALAWAVYLRGQPAPVAGTVRPYAPNIELNDE CCCCEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC EKQILADSPKIVAEASAESIGVDLKKILELRKLFKQRNDQIRITVNDILVLYRAIHAVSY HHHHHCCCCCCEECCCHHHHCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCC KPNPELQASLQEASNDANLKAAVEATITAFEESLANPAILIPVDGSIPNPSDRLHPMTFE CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEE VPLEELEISKLHERALSLLDQARQEWRAEVWDTFEATQKHYLATIAGFGEVSARAKDIAQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH SGESTSSGALRLLAHVPMALQRLLDAIPGKFDVLNDLIKGREVLSNVGAVADTSSLTRFI CCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEE TAKDDNEKKTLAWGVITDANGVMHVSLRDFRPHVGLFVAAGRRDLARRIANDYLESYVNG EECCCCCCCEEEEEEEECCCCEEEEEEHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHH LNRFISELTKITQGRHSRQ HHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MDSQQQFTAASHLTADNLRSIAHSISISQVSRLSLPEIDAVVDQISRVVPAGNVPGVILS CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHH GLAKLTGRRPAGNVIKRDVNLLFRGVEQALDKAVFSTFFAGPAAVIWGYQKLLELAGKDP HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC QDAFPEGTWQFYVGYALREDTARHANETIGFDETLNDHKINLPPIDRMTAWVMAAIHILH CCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH SYPDLLENEWRERVSLALLRDLTKVNPETRQFADLYNQWERQRPYGRGPDVQSQENYALY HCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH RKRKFDEFMAESTRDLPKEIRERWGKQFQRAREIALPAYQRQMALAAYLDPTPYNENMVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEE LPRQSWHIGLIWRGHYYLIPACAPNSTRPNDVSSVRSQIAALLASPANHAPTSLIPLATT ECCCCCEEEEEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCC KRTILPSILGKLRPETSQQLEALRCAPIWFNADGRPRHLPLAELRLTERGLGDHGLTLID HHHHHHHHHHHCCCCHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHCCCCCCCEEEEE TGSSMVFDQSHIFFDGAWGSAVAEIMTLEALAWAVYLRGQPAPVAGTVRPYAPNIELNDE CCCCEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC EKQILADSPKIVAEASAESIGVDLKKILELRKLFKQRNDQIRITVNDILVLYRAIHAVSY HHHHHCCCCCCEECCCHHHHCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCC KPNPELQASLQEASNDANLKAAVEATITAFEESLANPAILIPVDGSIPNPSDRLHPMTFE CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEE VPLEELEISKLHERALSLLDQARQEWRAEVWDTFEATQKHYLATIAGFGEVSARAKDIAQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH SGESTSSGALRLLAHVPMALQRLLDAIPGKFDVLNDLIKGREVLSNVGAVADTSSLTRFI CCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEE TAKDDNEKKTLAWGVITDANGVMHVSLRDFRPHVGLFVAAGRRDLARRIANDYLESYVNG EECCCCCCCEEEEEEEECCCCEEEEEEHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHH LNRFISELTKITQGRHSRQ HHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA