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The map label for this gene is 159041986

Identifier: 159041986

GI number: 159041986

Start: 1502617

End: 1503327

Strand: Reverse

Name: 159041986

Synonym: Cmaq_1423

Alternate gene names: NA

Gene position: 1503327-1502617 (Counterclockwise)

Preceding gene: 159041988

Following gene: 159041984

Centisome position: 72.36

GC content: 38.12

Gene sequence:

>711_bases
ATGTACATCAATAGTGATAGATTAACTTATGTGGAACTCAGTTTAATTCACTTATCCGACTGGACCTCAAGGGTTAACTT
TGATTATGAGTATGTTGTCATGAAATCTGATATTAATGCATTGAGGGGTTACTCCCTTGAATTCTCAATACTCAAGGTTA
GGGATAAGGATTCATTGAAGAGAATAATGCGCATTATTAGGAGTAGTGACGCAATAATTGATGTAGTTGGGTTCAGGGAA
TTGAATTATGGGTACCCTAAGAGAATTGCCATCGTGTTGAAGAACAGTTTAAATGACTCCACTAGGTATAAGGCATGGCA
GCTAAGTGGTTTTGAGACTAAGGATCACATAGTTAATGGTATTGAAAACTGGGGTTTCATATTCATGAATAAGGATTCCA
TTGAAACCTTTAGGAGACAATTAGAAGACAGTGGTAGAGTATTATCCTTCAGGGTTAGGGACATTGATTTAAACGACGCA
TTTAACCTGGTTAACTCTAGGAGTATTCACGCATTATTAACTAAGAACGAATTAAAAGTACTCAAGGCTGCCCATAAAGG
CGGCTTCTTCGATGAACCTAGGGGAATTAACCTAATTAACCTAAGTAAAGCACTTAACCTATCCCCATCAACTGTTAACC
ACGAGTTAAGGAACGCCCTACGTAAGTTGCTTAGCCAATACCTTGGGCTTAACCAATACCCATATGAGTAG

Upstream 100 bases:

>100_bases
ATCACCACGGTATCGCATGCGGCTTTTAAAAATGACATATAGTACATTAACTAATGCGCTTTGGGAAAATTTTTAAATTT
CTTAAAACATATTGAGTTTA

Downstream 100 bases:

>100_bases
ATTCAAGGCCCTTAACCATTACTTTACACAGTGAATATTAATAATTAATTCATCAACATCACTAAACCTTTATTAAGGAA
TTCAAGGAATCAACAATTAG

Product: bacterio-opsin activator

Products: NA

Alternate protein names: Bacterio-Opsin Activator HTH Domain Protein; Bacterio-Opsin Activator HTH Domain-Containing Protein

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MYINSDRLTYVELSLIHLSDWTSRVNFDYEYVVMKSDINALRGYSLEFSILKVRDKDSLKRIMRIIRSSDAIIDVVGFRE
LNYGYPKRIAIVLKNSLNDSTRYKAWQLSGFETKDHIVNGIENWGFIFMNKDSIETFRRQLEDSGRVLSFRVRDIDLNDA
FNLVNSRSIHALLTKNELKVLKAAHKGGFFDEPRGINLINLSKALNLSPSTVNHELRNALRKLLSQYLGLNQYPYE

Sequences:

>Translated_236_residues
MYINSDRLTYVELSLIHLSDWTSRVNFDYEYVVMKSDINALRGYSLEFSILKVRDKDSLKRIMRIIRSSDAIIDVVGFRE
LNYGYPKRIAIVLKNSLNDSTRYKAWQLSGFETKDHIVNGIENWGFIFMNKDSIETFRRQLEDSGRVLSFRVRDIDLNDA
FNLVNSRSIHALLTKNELKVLKAAHKGGFFDEPRGINLINLSKALNLSPSTVNHELRNALRKLLSQYLGLNQYPYE
>Mature_236_residues
MYINSDRLTYVELSLIHLSDWTSRVNFDYEYVVMKSDINALRGYSLEFSILKVRDKDSLKRIMRIIRSSDAIIDVVGFRE
LNYGYPKRIAIVLKNSLNDSTRYKAWQLSGFETKDHIVNGIENWGFIFMNKDSIETFRRQLEDSGRVLSFRVRDIDLNDA
FNLVNSRSIHALLTKNELKVLKAAHKGGFFDEPRGINLINLSKALNLSPSTVNHELRNALRKLLSQYLGLNQYPYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27446; Mature: 27446

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYINSDRLTYVELSLIHLSDWTSRVNFDYEYVVMKSDINALRGYSLEFSILKVRDKDSLK
CEECCCCEEEEEEEEEEECCCHHHCCCCEEEEEEECCCHHHCCCCEEEEEEEECCHHHHH
RIMRIIRSSDAIIDVVGFRELNYGYPKRIAIVLKNSLNDSTRYKAWQLSGFETKDHIVNG
HHHHHHCCCCCEEEEECEEECCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCHHHHHHC
IENWGFIFMNKDSIETFRRQLEDSGRVLSFRVRDIDLNDAFNLVNSRSIHALLTKNELKV
CCCCCEEEEECHHHHHHHHHHHCCCCEEEEEEEEECCHHHHHHHCCCCEEEEEEHHHHHH
LKAAHKGGFFDEPRGINLINLSKALNLSPSTVNHELRNALRKLLSQYLGLNQYPYE
HHHHHCCCCCCCCCCCEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MYINSDRLTYVELSLIHLSDWTSRVNFDYEYVVMKSDINALRGYSLEFSILKVRDKDSLK
CEECCCCEEEEEEEEEEECCCHHHCCCCEEEEEEECCCHHHCCCCEEEEEEEECCHHHHH
RIMRIIRSSDAIIDVVGFRELNYGYPKRIAIVLKNSLNDSTRYKAWQLSGFETKDHIVNG
HHHHHHCCCCCEEEEECEEECCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCHHHHHHC
IENWGFIFMNKDSIETFRRQLEDSGRVLSFRVRDIDLNDAFNLVNSRSIHALLTKNELKV
CCCCCEEEEECHHHHHHHHHHHCCCCEEEEEEEEECCHHHHHHHCCCCEEEEEEHHHHHH
LKAAHKGGFFDEPRGINLINLSKALNLSPSTVNHELRNALRKLLSQYLGLNQYPYE
HHHHHCCCCCCCCCCCEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA