| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
Click here to switch to the map view.
The map label for this gene is hisD [H]
Identifier: 159041971
GI number: 159041971
Start: 1482348
End: 1483547
Strand: Reverse
Name: hisD [H]
Synonym: Cmaq_1407
Alternate gene names: 159041971
Gene position: 1483547-1482348 (Counterclockwise)
Preceding gene: 159041975
Following gene: 159041970
Centisome position: 71.41
GC content: 50.0
Gene sequence:
>1200_bases GTGAGGGTTAGTAGGGGGGATTTACTAAGCCTCTTAAGGAAGGCCACCGACATGGATCAGTACGTTGATAGGGTTAGGGG TATTATTAATGATGTTAAGGAGCATGGTGATGAGGCATTACTCAGATTAACAAGTGAACTGGATGGCGTTAAGTTAAGCT CCATTGAGTTGAGTCAAAGTGAATTGAGGGCATTAGCCAGTGGTATTGAGCCAAGGGTTAGGGAGGCTTTGGATGAGGTA ATGGCCTCGGTGGAGTCTTTCAATACTGGTGTTAAGCCAAGGGACTTTGAGGATTACCACAGGGGCTTGAGGAGGGGGGT TAAGTGGGTGCCTTTAAGTAGAGTTGGCTTATACGTGCCTAAGGGCTACTTCTCAACACTGGTTATGACAGGGGTCTTAG CTAAGGTGGCTGGTGTTGAGGAGATAATTGCTGTGACACCACCTAGGCGTGATGGCTTAATTGATCCTGAAATCGCCTAC GTGGCCTTAAGGTTGAATGCAAGGGTTTTCAGGGTTGGTGGGGCGCAGGCCGTGGCTGCATTAGCCTTCGGCACCGAGTC GGTGCCAAGGGTGGATAAGATTATTGGTCCAGGTAACGCCTACGTGCAGGCGGCTAAGCTACTGGTTTCAAGCCACGTGG GTATTGATGGTGTAGAAGGACCCACTGAATTAGTAACCTGCGCTGACCCAGGTATTAAACCAATCACCGTGGCCCTGGAC TTGGCTGCTCAACTTGAGCACGCCGGGGCAGTGGGTGTGGTGGTTACTTGGAGTGAAGGGTACTTAACGGCTATTGAAGA TGAGTTAAGTAAGTTAACTAATGCACCATACTTCTCAACACTGGTTAATGAACCTAGTGAATGCGTTAACGTGATTAATG AGGTGGCGCCGGAGCATGCATCAATATGGGGTGTTAAAATACCCATTGAGGGTATTAGGAATGCTGGGGCAGTATCAATA ATGGCTCCCTCAGCCCTAGTGGATTACGCCGCTGGGCCAAGCCACGTCCTGCCCACGGGTGGTTCAGCTAGGTGGAGGGG TGTTTTAACGCCAATGGACTTCATGAAACCCATAGCCTACGTGGAACCCACCAGTGGGGATGAGGCTAGGAGGCTTGGTG AATTAGGGGCAGTACTGGGTTTAAGGGAGGGGTTTAGGAGGCATTCAGAGGCATTAACGAATTGGATTAACGAGGAGTGA
Upstream 100 bases:
>100_bases AACCCTAACCCATGAGGCTTACCCACTAGTTGCTTGAACCCGTTTTAGAAGTATTATTCAAGGTGCAATACATTATTAAG CAGTTGGGTGCCGGGGTATT
Downstream 100 bases:
>100_bases AACCCTCAAGCAAAGTACCTGGTGTTTATTTAGGCAAAGCATTTATACCGTTGCCTAATAATGCCTAGGTGGATGATTGC GACTTCCTTAAGGTGCTGGA
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MRVSRGDLLSLLRKATDMDQYVDRVRGIINDVKEHGDEALLRLTSELDGVKLSSIELSQSELRALASGIEPRVREALDEV MASVESFNTGVKPRDFEDYHRGLRRGVKWVPLSRVGLYVPKGYFSTLVMTGVLAKVAGVEEIIAVTPPRRDGLIDPEIAY VALRLNARVFRVGGAQAVAALAFGTESVPRVDKIIGPGNAYVQAAKLLVSSHVGIDGVEGPTELVTCADPGIKPITVALD LAAQLEHAGAVGVVVTWSEGYLTAIEDELSKLTNAPYFSTLVNEPSECVNVINEVAPEHASIWGVKIPIEGIRNAGAVSI MAPSALVDYAAGPSHVLPTGGSARWRGVLTPMDFMKPIAYVEPTSGDEARRLGELGAVLGLREGFRRHSEALTNWINEE
Sequences:
>Translated_399_residues MRVSRGDLLSLLRKATDMDQYVDRVRGIINDVKEHGDEALLRLTSELDGVKLSSIELSQSELRALASGIEPRVREALDEV MASVESFNTGVKPRDFEDYHRGLRRGVKWVPLSRVGLYVPKGYFSTLVMTGVLAKVAGVEEIIAVTPPRRDGLIDPEIAY VALRLNARVFRVGGAQAVAALAFGTESVPRVDKIIGPGNAYVQAAKLLVSSHVGIDGVEGPTELVTCADPGIKPITVALD LAAQLEHAGAVGVVVTWSEGYLTAIEDELSKLTNAPYFSTLVNEPSECVNVINEVAPEHASIWGVKIPIEGIRNAGAVSI MAPSALVDYAAGPSHVLPTGGSARWRGVLTPMDFMKPIAYVEPTSGDEARRLGELGAVLGLREGFRRHSEALTNWINEE >Mature_399_residues MRVSRGDLLSLLRKATDMDQYVDRVRGIINDVKEHGDEALLRLTSELDGVKLSSIELSQSELRALASGIEPRVREALDEV MASVESFNTGVKPRDFEDYHRGLRRGVKWVPLSRVGLYVPKGYFSTLVMTGVLAKVAGVEEIIAVTPPRRDGLIDPEIAY VALRLNARVFRVGGAQAVAALAFGTESVPRVDKIIGPGNAYVQAAKLLVSSHVGIDGVEGPTELVTCADPGIKPITVALD LAAQLEHAGAVGVVVTWSEGYLTAIEDELSKLTNAPYFSTLVNEPSECVNVINEVAPEHASIWGVKIPIEGIRNAGAVSI MAPSALVDYAAGPSHVLPTGGSARWRGVLTPMDFMKPIAYVEPTSGDEARRLGELGAVLGLREGFRRHSEALTNWINEE
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=414, Percent_Identity=33.5748792270531, Blast_Score=186, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6319819, Length=415, Percent_Identity=32.7710843373494, Blast_Score=174, Evalue=2e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 42935; Mature: 42935
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVSRGDLLSLLRKATDMDQYVDRVRGIINDVKEHGDEALLRLTSELDGVKLSSIELSQS CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHH ELRALASGIEPRVREALDEVMASVESFNTGVKPRDFEDYHRGLRRGVKWVPLSRVGLYVP HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEECCHHHHCEECC KGYFSTLVMTGVLAKVAGVEEIIAVTPPRRDGLIDPEIAYVALRLNARVFRVGGAQAVAA CHHHHHHHHHHHHHHHHCHHHHHEECCCCCCCCCCCCCEEEEEEECCEEEEECCHHHHHH LAFGTESVPRVDKIIGPGNAYVQAAKLLVSSHVGIDGVEGPTELVTCADPGIKPITVALD HHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCEEHHHHH LAAQLEHAGAVGVVVTWSEGYLTAIEDELSKLTNAPYFSTLVNEPSECVNVINEVAPEHA HHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHCCCCH SIWGVKIPIEGIRNAGAVSIMAPSALVDYAAGPSHVLPTGGSARWRGVLTPMDFMKPIAY HEEEEEEEHHHCCCCCEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCE VEPTSGDEARRLGELGAVLGLREGFRRHSEALTNWINEE ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRVSRGDLLSLLRKATDMDQYVDRVRGIINDVKEHGDEALLRLTSELDGVKLSSIELSQS CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHH ELRALASGIEPRVREALDEVMASVESFNTGVKPRDFEDYHRGLRRGVKWVPLSRVGLYVP HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEECCHHHHCEECC KGYFSTLVMTGVLAKVAGVEEIIAVTPPRRDGLIDPEIAYVALRLNARVFRVGGAQAVAA CHHHHHHHHHHHHHHHHCHHHHHEECCCCCCCCCCCCCEEEEEEECCEEEEECCHHHHHH LAFGTESVPRVDKIIGPGNAYVQAAKLLVSSHVGIDGVEGPTELVTCADPGIKPITVALD HHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCEEHHHHH LAAQLEHAGAVGVVVTWSEGYLTAIEDELSKLTNAPYFSTLVNEPSECVNVINEVAPEHA HHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHCCCCH SIWGVKIPIEGIRNAGAVSIMAPSALVDYAAGPSHVLPTGGSARWRGVLTPMDFMKPIAY HEEEEEEEHHHCCCCCEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCE VEPTSGDEARRLGELGAVLGLREGFRRHSEALTNWINEE ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9209067; 10701121; 11427726 [H]