Definition Caldivirga maquilingensis IC-167 chromosome, complete genome.
Accession NC_009954
Length 2,077,567

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The map label for this gene is 159041839

Identifier: 159041839

GI number: 159041839

Start: 1341634

End: 1344018

Strand: Reverse

Name: 159041839

Synonym: Cmaq_1274

Alternate gene names: NA

Gene position: 1344018-1341634 (Counterclockwise)

Preceding gene: 159041843

Following gene: 159041837

Centisome position: 64.69

GC content: 44.28

Gene sequence:

>2385_bases
ATGGATCTGTATACCTCAAGGAGTGCAACAGCAGTCACCTCAATAATAGTTGCCTTAGTTGCCGCTGTGGTTGGGTTATA
TGCCTCTCATGTTGTATATGCTCAAGAATCCCAAGTAACGTACACGTTCACCACCGCCTATTTCGGGTGGACGTGGTCCC
CTGCAGCCCACTACTGGAATCCATTCGCCCCCATTAATTACATAGATTGGCCAGCCTTTGTAGCAATGCCTCTTGCCGCC
TATGATGACCCTACTGGTCAGTGGTGGCCTATTCTAGCCAGTAATTGGACTGCGTTTCCTCAAAATAAGACTGTAATCAT
CTACCTTAGACATAACATCTATTGGTTTAATGGTTCAGCGGTAATGCCCTTCACTGCTTGGGATGTTTACGCTGAACTCT
ACATTGGTGTTAAGGCATTCAGCTGGTACTACCCATACTTAACACCCCAGAATGCGAGTGAGGAGATTAGGGTGCTTAAC
AATTATACGTTGGAGATAGTTTTCAACATATGGTCACCCACAGAGTACTATTGGATACTCATGCAGACCATAGCAACTCC
ATGGCCCGTGTGGAAGCCTATTGTTGAGAAGCTTCAAACAATGAATGCCAGTCAAGCCTACACCTTTGGTCAAGTTAACA
TAACCGAGTTCAACCCACCCATGTGGAGTAATGGGCCATACTACGTGGCATCAATTGGACCAACCTACATAACTCAGAAC
CTTGACCCAATGTACTTTGATGGTAAGCCGTTGCTGGCTGAGTGGGATAAGATACTACCATTCCACACATGGCAGTACTA
CCCAACATTCATTGCATGGAACAACCCAGGTGCATCAACTATCTTAGCCGCAATAGCAGCCCAGAAGCCAGTTTACATTG
AGTGGATAGCCTTCAGTCTTCTTAAGGATTTACAGATAATAAATAGTACACCTGGCTTCAAATACTATGTAATGCCCGAC
TTATCAATATTCGGCATAGGTATACCAACATATTACCCGTTTAATATTCCTCAGGTTAGGCAAGCATTCCTATACATCAT
TAATAGGAGTGAGGCCGCTGCCGCCTGGGGACCACCGTGGTTAACGTACCCAGTTTACATTAATGTTCCAGCACCAGCAC
CAACAGCTGCCTCAGGGCTTTGGTTAACATTCCCGAAGGATCTTAGAAGCATAGCCGTTAACTTCACTGAACCCAATTGG
ACTAAGGCAGCTCAACTACTGGAATCAGCCGGCTTAAAGTACAAGAATGGTCAATGGTACCTACCCAACGGAACACCACT
AACACTAACAATATACGCATCAGCACCAATGGTTAACTGGATCACGCAGGCTCAAGTCGCTTTTAACCAACTTGAAGAAT
TTGGAATACCCGTTAAATTAATTACACTGGAATCATCAACATACTCCACTGAAGTATCTCAATGCCAACTACCTGCTGTG
GTTGACTGGATGTTCGCCGGTTCTAATAAGGGTGGTTACTCAACACTATGGATATCATACGATGTTGCATTCACAATGAC
ACATCCAGCGCTTTTGCCATCTGGCTGGTGTATTCCTGGCCACACTACGCCTTTCGCCTACCCGATTGTTCAGAATAATG
AGATTACCGGCTGGTATTGTAAACCATTAACCACTAACCTGCCTATACCGAATAATACAATTATCTGGTGCATTAACTCA
ACCTATGGCTACATTAACTTGAGTAATTGGCAGAATGCCATAATAGCGGCTGAGCCAGGCAGCAGTACCTATGAGGAGCT
TCTTAAGGCCTACTTCTCATGGTTTGAGTACTGGGTACCTGGAGTGGAAATATCAACAGCCACAATAACTGCAGCATTCC
CAGTAAAGATAACTAACCCAATGTGGGCTTATGAATGCATGAACTTCAAGAATCCTAAGTATACTAAGGCAGCATATTCA
CTATTTCACCAATATGCAGTTGCTGGATTACCTCCCGAATTCAATACAGTATTATCACTAGGCGCCTACGCACCGCAGGG
TGTTATTCCTCCTTTGGCTGAGGCTATTATTAATGGTAGTCTTTGGACTAATCCGTATCTGCATCAGTACGCTGTCTTCA
TTGGTTTGCCTAATCCTGATCCTCAGTTGCAGGCTTGTGTAGCATCATACTTCCACACAACGTACACACCAGTTACTACA
ACCACTACTTCAACTGTTACCTCAACCACTACGGCTGTTAGCACTGTTACAAGCACAGTCACAACAACTGCAGTTAGCAC
TGTGACTAGCACAGCAACAACCACAGCCATATCAACCGTAACCGTGACTAAACCAGTAATATCAACAGCACTAATAGCAG
GAATAGTAATAATAGTAGTGGTTATTGCCATTGTTGCAGCAATAATAGCGTTGAGGAGAAGATAA

Upstream 100 bases:

>100_bases
GTTGCATAACTATTCTCACTACTAATGATATTAATATTCAATATTTGTAAAATAAAAATATTGAGAAAAAATTTTTAAAG
ATGCTTAGTGTAACTAAAAT

Downstream 100 bases:

>100_bases
TTATAAATTAATTAAAAATAAAAATTAATTAATTTTATCATTAATATTCTTAAATAATACTTCATTATGTATAACTTTAT
TTAGTATTTTTACAGAGGAG

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 794; Mature: 794

Protein sequence:

>794_residues
MDLYTSRSATAVTSIIVALVAAVVGLYASHVVYAQESQVTYTFTTAYFGWTWSPAAHYWNPFAPINYIDWPAFVAMPLAA
YDDPTGQWWPILASNWTAFPQNKTVIIYLRHNIYWFNGSAVMPFTAWDVYAELYIGVKAFSWYYPYLTPQNASEEIRVLN
NYTLEIVFNIWSPTEYYWILMQTIATPWPVWKPIVEKLQTMNASQAYTFGQVNITEFNPPMWSNGPYYVASIGPTYITQN
LDPMYFDGKPLLAEWDKILPFHTWQYYPTFIAWNNPGASTILAAIAAQKPVYIEWIAFSLLKDLQIINSTPGFKYYVMPD
LSIFGIGIPTYYPFNIPQVRQAFLYIINRSEAAAAWGPPWLTYPVYINVPAPAPTAASGLWLTFPKDLRSIAVNFTEPNW
TKAAQLLESAGLKYKNGQWYLPNGTPLTLTIYASAPMVNWITQAQVAFNQLEEFGIPVKLITLESSTYSTEVSQCQLPAV
VDWMFAGSNKGGYSTLWISYDVAFTMTHPALLPSGWCIPGHTTPFAYPIVQNNEITGWYCKPLTTNLPIPNNTIIWCINS
TYGYINLSNWQNAIIAAEPGSSTYEELLKAYFSWFEYWVPGVEISTATITAAFPVKITNPMWAYECMNFKNPKYTKAAYS
LFHQYAVAGLPPEFNTVLSLGAYAPQGVIPPLAEAIINGSLWTNPYLHQYAVFIGLPNPDPQLQACVASYFHTTYTPVTT
TTTSTVTSTTTAVSTVTSTVTTTAVSTVTSTATTTAISTVTVTKPVISTALIAGIVIIVVVIAIVAAIIALRRR

Sequences:

>Translated_794_residues
MDLYTSRSATAVTSIIVALVAAVVGLYASHVVYAQESQVTYTFTTAYFGWTWSPAAHYWNPFAPINYIDWPAFVAMPLAA
YDDPTGQWWPILASNWTAFPQNKTVIIYLRHNIYWFNGSAVMPFTAWDVYAELYIGVKAFSWYYPYLTPQNASEEIRVLN
NYTLEIVFNIWSPTEYYWILMQTIATPWPVWKPIVEKLQTMNASQAYTFGQVNITEFNPPMWSNGPYYVASIGPTYITQN
LDPMYFDGKPLLAEWDKILPFHTWQYYPTFIAWNNPGASTILAAIAAQKPVYIEWIAFSLLKDLQIINSTPGFKYYVMPD
LSIFGIGIPTYYPFNIPQVRQAFLYIINRSEAAAAWGPPWLTYPVYINVPAPAPTAASGLWLTFPKDLRSIAVNFTEPNW
TKAAQLLESAGLKYKNGQWYLPNGTPLTLTIYASAPMVNWITQAQVAFNQLEEFGIPVKLITLESSTYSTEVSQCQLPAV
VDWMFAGSNKGGYSTLWISYDVAFTMTHPALLPSGWCIPGHTTPFAYPIVQNNEITGWYCKPLTTNLPIPNNTIIWCINS
TYGYINLSNWQNAIIAAEPGSSTYEELLKAYFSWFEYWVPGVEISTATITAAFPVKITNPMWAYECMNFKNPKYTKAAYS
LFHQYAVAGLPPEFNTVLSLGAYAPQGVIPPLAEAIINGSLWTNPYLHQYAVFIGLPNPDPQLQACVASYFHTTYTPVTT
TTTSTVTSTTTAVSTVTSTVTTTAVSTVTSTATTTAISTVTVTKPVISTALIAGIVIIVVVIAIVAAIIALRRR
>Mature_794_residues
MDLYTSRSATAVTSIIVALVAAVVGLYASHVVYAQESQVTYTFTTAYFGWTWSPAAHYWNPFAPINYIDWPAFVAMPLAA
YDDPTGQWWPILASNWTAFPQNKTVIIYLRHNIYWFNGSAVMPFTAWDVYAELYIGVKAFSWYYPYLTPQNASEEIRVLN
NYTLEIVFNIWSPTEYYWILMQTIATPWPVWKPIVEKLQTMNASQAYTFGQVNITEFNPPMWSNGPYYVASIGPTYITQN
LDPMYFDGKPLLAEWDKILPFHTWQYYPTFIAWNNPGASTILAAIAAQKPVYIEWIAFSLLKDLQIINSTPGFKYYVMPD
LSIFGIGIPTYYPFNIPQVRQAFLYIINRSEAAAAWGPPWLTYPVYINVPAPAPTAASGLWLTFPKDLRSIAVNFTEPNW
TKAAQLLESAGLKYKNGQWYLPNGTPLTLTIYASAPMVNWITQAQVAFNQLEEFGIPVKLITLESSTYSTEVSQCQLPAV
VDWMFAGSNKGGYSTLWISYDVAFTMTHPALLPSGWCIPGHTTPFAYPIVQNNEITGWYCKPLTTNLPIPNNTIIWCINS
TYGYINLSNWQNAIIAAEPGSSTYEELLKAYFSWFEYWVPGVEISTATITAAFPVKITNPMWAYECMNFKNPKYTKAAYS
LFHQYAVAGLPPEFNTVLSLGAYAPQGVIPPLAEAIINGSLWTNPYLHQYAVFIGLPNPDPQLQACVASYFHTTYTPVTT
TTTSTVTSTTTAVSTVTSTVTTTAVSTVTSTATTTAISTVTVTKPVISTALIAGIVIIVVVIAIVAAIIALRRR

Specific function: Unknown

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 88697; Mature: 88697

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLYTSRSATAVTSIIVALVAAVVGLYASHVVYAQESQVTYTFTTAYFGWTWSPAAHYWN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEEEEEEEEECEECCCHHHCCC
PFAPINYIDWPAFVAMPLAAYDDPTGQWWPILASNWTAFPQNKTVIIYLRHNIYWFNGSA
CCCCCCCCCCCHHHHEEHHHCCCCCCCEEEEEECCCEECCCCCEEEEEEEEEEEEECCCE
VMPFTAWDVYAELYIGVKAFSWYYPYLTPQNASEEIRVLNNYTLEIVFNIWSPTEYYWIL
EEEEEHHHHHHHHHEEEEEEEEEECEECCCCCCCCEEEECCEEEEEEEEECCCCHHHHHE
MQTIATPWPVWKPIVEKLQTMNASQAYTFGQVNITEFNPPMWSNGPYYVASIGPTYITQN
EHHHCCCCCHHHHHHHHHHHCCCCCCEEECEEEEEECCCCCCCCCCEEEEECCCHHEECC
LDPMYFDGKPLLAEWDKILPFHTWQYYPTFIAWNNPGASTILAAIAAQKPVYIEWIAFSL
CCCEEECCCCHHHHHHHCCCEEEEEEEEEEEEECCCCHHHHHHHHHCCCCEEEHHHHHHH
LKDLQIINSTPGFKYYVMPDLSIFGIGIPTYYPFNIPQVRQAFLYIINRSEAAAAWGPPW
HHHHHHHCCCCCEEEEEECCCEEEEECCCCCCCCCCHHHHHHHEEEEECCCCCCCCCCCC
LTYPVYINVPAPAPTAASGLWLTFPKDLRSIAVNFTEPNWTKAAQLLESAGLKYKNGQWY
EEEEEEEECCCCCCCCCCCEEEECCHHHCEEEEECCCCCHHHHHHHHHHCCCEECCCEEE
LPNGTPLTLTIYASAPMVNWITQAQVAFNQLEEFGIPVKLITLESSTYSTEVSQCQLPAV
CCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHCCCCHH
VDWMFAGSNKGGYSTLWISYDVAFTMTHPALLPSGWCIPGHTTPFAYPIVQNNEITGWYC
EEEEEECCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEE
KPLTTNLPIPNNTIIWCINSTYGYINLSNWQNAIIAAEPGSSTYEELLKAYFSWFEYWVP
CCCCCCCCCCCCEEEEEEECCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCC
GVEISTATITAAFPVKITNPMWAYECMNFKNPKYTKAAYSLFHQYAVAGLPPEFNTVLSL
CEEEEEEEEEEEEEEEECCCEEEHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHEE
GAYAPQGVIPPLAEAIINGSLWTNPYLHQYAVFIGLPNPDPQLQACVASYFHTTYTPVTT
CCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEE
TTTSTVTSTTTAVSTVTSTVTTTAVSTVTSTATTTAISTVTVTKPVISTALIAGIVIIVV
ECCCCEECCHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEEEEHHHHHHHHHHHHHHHHHH
VIAIVAAIIALRRR
HHHHHHHHHHHHCC
>Mature Secondary Structure
MDLYTSRSATAVTSIIVALVAAVVGLYASHVVYAQESQVTYTFTTAYFGWTWSPAAHYWN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEEEEEEEEECEECCCHHHCCC
PFAPINYIDWPAFVAMPLAAYDDPTGQWWPILASNWTAFPQNKTVIIYLRHNIYWFNGSA
CCCCCCCCCCCHHHHEEHHHCCCCCCCEEEEEECCCEECCCCCEEEEEEEEEEEEECCCE
VMPFTAWDVYAELYIGVKAFSWYYPYLTPQNASEEIRVLNNYTLEIVFNIWSPTEYYWIL
EEEEEHHHHHHHHHEEEEEEEEEECEECCCCCCCCEEEECCEEEEEEEEECCCCHHHHHE
MQTIATPWPVWKPIVEKLQTMNASQAYTFGQVNITEFNPPMWSNGPYYVASIGPTYITQN
EHHHCCCCCHHHHHHHHHHHCCCCCCEEECEEEEEECCCCCCCCCCEEEEECCCHHEECC
LDPMYFDGKPLLAEWDKILPFHTWQYYPTFIAWNNPGASTILAAIAAQKPVYIEWIAFSL
CCCEEECCCCHHHHHHHCCCEEEEEEEEEEEEECCCCHHHHHHHHHCCCCEEEHHHHHHH
LKDLQIINSTPGFKYYVMPDLSIFGIGIPTYYPFNIPQVRQAFLYIINRSEAAAAWGPPW
HHHHHHHCCCCCEEEEEECCCEEEEECCCCCCCCCCHHHHHHHEEEEECCCCCCCCCCCC
LTYPVYINVPAPAPTAASGLWLTFPKDLRSIAVNFTEPNWTKAAQLLESAGLKYKNGQWY
EEEEEEEECCCCCCCCCCCEEEECCHHHCEEEEECCCCCHHHHHHHHHHCCCEECCCEEE
LPNGTPLTLTIYASAPMVNWITQAQVAFNQLEEFGIPVKLITLESSTYSTEVSQCQLPAV
CCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHCCCCHH
VDWMFAGSNKGGYSTLWISYDVAFTMTHPALLPSGWCIPGHTTPFAYPIVQNNEITGWYC
EEEEEECCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEE
KPLTTNLPIPNNTIIWCINSTYGYINLSNWQNAIIAAEPGSSTYEELLKAYFSWFEYWVP
CCCCCCCCCCCCEEEEEEECCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCC
GVEISTATITAAFPVKITNPMWAYECMNFKNPKYTKAAYSLFHQYAVAGLPPEFNTVLSL
CEEEEEEEEEEEEEEEECCCEEEHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHEE
GAYAPQGVIPPLAEAIINGSLWTNPYLHQYAVFIGLPNPDPQLQACVASYFHTTYTPVTT
CCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEE
TTTSTVTSTTTAVSTVTSTVTTTAVSTVTSTATTTAISTVTVTKPVISTALIAGIVIIVV
ECCCCEECCHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEEEEHHHHHHHHHHHHHHHHHH
VIAIVAAIIALRRR
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA