Click here to switch to the map view.

The map label for this gene is 159041827

Identifier: 159041827

GI number: 159041827

Start: 1334479

End: 1335042

Strand: Reverse

Name: 159041827

Synonym: Cmaq_1262

Alternate gene names: NA

Gene position: 1335042-1334479 (Counterclockwise)

Preceding gene: 159041828

Following gene: 159041826

Centisome position: 64.26

GC content: 42.02

Gene sequence:

>564_bases
TTGAGTTTGGTTAAGGTGTTTAAGCTAGTTATTGCTGGACCCTATGGGGCAGGTAAGACAACCTTCGTTAAAACCCTAAG
TGAAGTGGTACCCATTGAAACTGACGTACCCACAGCTGGTAAAACCACCACGGTGGCCTTTGATTACGGTAAGATAAGGG
TTAACGATATTGTTGTACACTTATTTGGTGTGCCAGGGCAGGAGAGGTTTAGTTTCCTTTGGAGGATAGTGGCTAGGGGT
ATGCATGCATACATATTTATGGTTGATTCATCATCCCTGGAGTCCGTTAAGGCCGCAGTATTCATGTATAATTACTTCAT
AAACGCATTCCCCAATACACCCCACATTATTGCAGCGAATAAGCAGGATGTAGCTAAGGTAAGTATTAACGATATTAGGA
CAATACTTGGTGTTAAACCGGAGATTAAGATTGTCCCGTTAATTGCAGTGAATAAGAAGATGGTTTTGGAAACCCTCATA
ACACTACTCAGTGAGGTTCATAGGCTAATGTATGGTTCAGCATTATCCTCAATTAATAAGGGTGACTCAGCCACAGGAAC
GTAG

Upstream 100 bases:

>100_bases
CAGTGTTCACAGTGGAGGGTGATGAAATCACTGAGGATGATGTATTAATGTTGATTGACTACTTCAAGAGTAAGTTAAGT
GAACTGGAGGTTAGAGGTGG

Downstream 100 bases:

>100_bases
CGCCCGGTGCCTTCACTATAAGCATTTAAACCTGTCACTAAGTCCTGGCATTAATGGTTGAATGCTCAGTTAGCGGTGTG
TTAATATTTGGGGAACCGGA

Product: small GTP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MSLVKVFKLVIAGPYGAGKTTFVKTLSEVVPIETDVPTAGKTTTVAFDYGKIRVNDIVVHLFGVPGQERFSFLWRIVARG
MHAYIFMVDSSSLESVKAAVFMYNYFINAFPNTPHIIAANKQDVAKVSINDIRTILGVKPEIKIVPLIAVNKKMVLETLI
TLLSEVHRLMYGSALSSINKGDSATGT

Sequences:

>Translated_187_residues
MSLVKVFKLVIAGPYGAGKTTFVKTLSEVVPIETDVPTAGKTTTVAFDYGKIRVNDIVVHLFGVPGQERFSFLWRIVARG
MHAYIFMVDSSSLESVKAAVFMYNYFINAFPNTPHIIAANKQDVAKVSINDIRTILGVKPEIKIVPLIAVNKKMVLETLI
TLLSEVHRLMYGSALSSINKGDSATGT
>Mature_186_residues
SLVKVFKLVIAGPYGAGKTTFVKTLSEVVPIETDVPTAGKTTTVAFDYGKIRVNDIVVHLFGVPGQERFSFLWRIVARGM
HAYIFMVDSSSLESVKAAVFMYNYFINAFPNTPHIIAANKQDVAKVSINDIRTILGVKPEIKIVPLIAVNKKMVLETLIT
LLSEVHRLMYGSALSSINKGDSATGT

Specific function: Unknown

COG id: COG2229

COG function: function code R; Predicted GTPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ1339 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016433
- InterPro:   IPR013684
- InterPro:   IPR001806
- InterPro:   IPR005225 [H]

Pfam domain/function: PF08477 Miro [H]

EC number: NA

Molecular weight: Translated: 20464; Mature: 20333

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLVKVFKLVIAGPYGAGKTTFVKTLSEVVPIETDVPTAGKTTTVAFDYGKIRVNDIVVH
CHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCEEEEEEEEEE
LFGVPGQERFSFLWRIVARGMHAYIFMVDSSSLESVKAAVFMYNYFINAFPNTPHIIAAN
EECCCCHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEC
KQDVAKVSINDIRTILGVKPEIKIVPLIAVNKKMVLETLITLLSEVHRLMYGSALSSINK
CCCCEEEEHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GDSATGT
CCCCCCC
>Mature Secondary Structure 
SLVKVFKLVIAGPYGAGKTTFVKTLSEVVPIETDVPTAGKTTTVAFDYGKIRVNDIVVH
HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCEEEEEEEEEE
LFGVPGQERFSFLWRIVARGMHAYIFMVDSSSLESVKAAVFMYNYFINAFPNTPHIIAAN
EECCCCHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEC
KQDVAKVSINDIRTILGVKPEIKIVPLIAVNKKMVLETLITLLSEVHRLMYGSALSSINK
CCCCEEEEHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GDSATGT
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]