| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
Click here to switch to the map view.
The map label for this gene is queC [H]
Identifier: 159041826
GI number: 159041826
Start: 1332917
End: 1334425
Strand: Reverse
Name: queC [H]
Synonym: Cmaq_1261
Alternate gene names: 159041826
Gene position: 1334425-1332917 (Counterclockwise)
Preceding gene: 159041827
Following gene: 159041823
Centisome position: 64.23
GC content: 47.45
Gene sequence:
>1509_bases ATGGTTGAATGCTCAGTTAGCGGTGTGTTAATATTTGGGGAACCGGATGAGGCGAGGATTAGGGGTATTGAGGATAAGTT AAGGAGTATTGTAATGAGGGCTGAGGAGAGGGGTAGGGATAGTTGGGGGATTGTAACAATGAGTAGGGATGGGGGGATTA AGTCATTTAAGTCACTGGGTAAGGCTAGTGAAACACTCCCCAAGTACTCAAGGCTACTGGATACCGACACAGTAGTGGCT ATAGCTAATAATAGGGCTGAACCAACCACTGAGTATGTTAAGGAGAAGGGGATTAATGATATTCAACCAATGATTAGTGA GTACGTGGTTGTTTCACATAACGGTACCATAGCCAATGACATTGAACTTGAGGGTAAGTATGGGATAAGGAAAATGAGTA AAATAGACTCATCGATACTACCACCCCTCCTGGAGAAGGCTTGGGATGGTTCACTGGAGGGTCTTCAGAAAATACTAAGG GATGAGATTATTGGATCCTTTGCATTAGCCATTATTGATAGGAGGAGGCCGGGTAGACTATGGTTGGCCGTTAACTTTAA GCCACTGTACGTCATGTGGGATAGGGAATTAAATGCACTCTTCTTCTCAAGCCTGGACACTTACCTCGAGGACCCTGATA AACCACCGTGGGAGACTAATGTAGTTAAGAGAATTGAACCCTACAGTGTCATTGAGGTTTCCAGGGAGGGTGGGTGGCGT AGGTTAAGTCTATGGAGAGTTGATTCAAGTAAGCCAAGGAGAGTACTAGTGGTGGCTAGCGGTGGCTTGGATTCAACAAC ATCTGCAACACAGTTAATTAAGCAGGGTTATGACGTCACACTACTGCATTTTAATTATGGTCATGTTGCCGAGGGACCTG AGGAGAATGCAGTGAGGAGGATTGCTGAATTCCTCAACGTGCCGTTACTGGAGGTTAACATGGACTTCTTCAAGATAGTT AAGCATTCACCACTGCTTGGTGATGGTGAGATTAATAGGAGGAGGGAGGGGATTACTGGAGCTGAGTTCGCGCATGAGTG GGTTCCAGCACGGAACCTGGTCTTCATAGCCTTAGCAGTGGCCATTGCTGAAGCCATGGGTTACGACTACGTAGCCACTG GGGTGAATCTAGAGGAGGCTGGTGCTTACCCTGATAACGAGATGGAGTTCATTAGGCTCCTTAACCAGGTAATGCCGTAT GCAGTGGGGCCGAATAAGCACGTTGAATTACTAATGCCGGTGGGGCACTTGGTTAAGCATGAGATTGTGAAGCTGGGACT AGAGATTGGGGCGCCACTTCACTTAACCTGGAGCTGCTACGATAAGGGGCCTAAGCACTGCGGCCGGTGTGGACCATGCT TTATGCGTAGGTTAGCCTTTAAGATTAATGGGGTCAGGGACCCAGTGGAGTATGACTTACCACCAGAGGTTGAGGAGGAG TACTGGAGGGGCACTAAACCATACAGGACTCCGTTACCAGTAGGTAAGAGAGAGTTGACTCAGCATTGA
Upstream 100 bases:
>100_bases CAGCATTATCCTCAATTAATAAGGGTGACTCAGCCACAGGAACGTAGCGCCCGGTGCCTTCACTATAAGCATTTAAACCT GTCACTAAGTCCTGGCATTA
Downstream 100 bases:
>100_bases TTTAAAAGAGGAGCCTTATTTTGAAGATAACTTAATTTAAGTCCCCCCAGTAGGTTTCATAGAGCCTTAACCAATAACCA CTAACTAGCTTATTCTTACC
Product: exsB protein
Products: NA
Alternate protein names: 7-cyano-7-carbaguanine synthase; Archaeosine biosynthesis protein queC; PreQ(0) synthase [H]
Number of amino acids: Translated: 502; Mature: 502
Protein sequence:
>502_residues MVECSVSGVLIFGEPDEARIRGIEDKLRSIVMRAEERGRDSWGIVTMSRDGGIKSFKSLGKASETLPKYSRLLDTDTVVA IANNRAEPTTEYVKEKGINDIQPMISEYVVVSHNGTIANDIELEGKYGIRKMSKIDSSILPPLLEKAWDGSLEGLQKILR DEIIGSFALAIIDRRRPGRLWLAVNFKPLYVMWDRELNALFFSSLDTYLEDPDKPPWETNVVKRIEPYSVIEVSREGGWR RLSLWRVDSSKPRRVLVVASGGLDSTTSATQLIKQGYDVTLLHFNYGHVAEGPEENAVRRIAEFLNVPLLEVNMDFFKIV KHSPLLGDGEINRRREGITGAEFAHEWVPARNLVFIALAVAIAEAMGYDYVATGVNLEEAGAYPDNEMEFIRLLNQVMPY AVGPNKHVELLMPVGHLVKHEIVKLGLEIGAPLHLTWSCYDKGPKHCGRCGPCFMRRLAFKINGVRDPVEYDLPPEVEEE YWRGTKPYRTPLPVGKRELTQH
Sequences:
>Translated_502_residues MVECSVSGVLIFGEPDEARIRGIEDKLRSIVMRAEERGRDSWGIVTMSRDGGIKSFKSLGKASETLPKYSRLLDTDTVVA IANNRAEPTTEYVKEKGINDIQPMISEYVVVSHNGTIANDIELEGKYGIRKMSKIDSSILPPLLEKAWDGSLEGLQKILR DEIIGSFALAIIDRRRPGRLWLAVNFKPLYVMWDRELNALFFSSLDTYLEDPDKPPWETNVVKRIEPYSVIEVSREGGWR RLSLWRVDSSKPRRVLVVASGGLDSTTSATQLIKQGYDVTLLHFNYGHVAEGPEENAVRRIAEFLNVPLLEVNMDFFKIV KHSPLLGDGEINRRREGITGAEFAHEWVPARNLVFIALAVAIAEAMGYDYVATGVNLEEAGAYPDNEMEFIRLLNQVMPY AVGPNKHVELLMPVGHLVKHEIVKLGLEIGAPLHLTWSCYDKGPKHCGRCGPCFMRRLAFKINGVRDPVEYDLPPEVEEE YWRGTKPYRTPLPVGKRELTQH >Mature_502_residues MVECSVSGVLIFGEPDEARIRGIEDKLRSIVMRAEERGRDSWGIVTMSRDGGIKSFKSLGKASETLPKYSRLLDTDTVVA IANNRAEPTTEYVKEKGINDIQPMISEYVVVSHNGTIANDIELEGKYGIRKMSKIDSSILPPLLEKAWDGSLEGLQKILR DEIIGSFALAIIDRRRPGRLWLAVNFKPLYVMWDRELNALFFSSLDTYLEDPDKPPWETNVVKRIEPYSVIEVSREGGWR RLSLWRVDSSKPRRVLVVASGGLDSTTSATQLIKQGYDVTLLHFNYGHVAEGPEENAVRRIAEFLNVPLLEVNMDFFKIV KHSPLLGDGEINRRREGITGAEFAHEWVPARNLVFIALAVAIAEAMGYDYVATGVNLEEAGAYPDNEMEFIRLLNQVMPY AVGPNKHVELLMPVGHLVKHEIVKLGLEIGAPLHLTWSCYDKGPKHCGRCGPCFMRRLAFKINGVRDPVEYDLPPEVEEE YWRGTKPYRTPLPVGKRELTQH
Specific function: Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) [H]
COG id: COG0603
COG function: function code R; Predicted PP-loop superfamily ATPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-2 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017932 - InterPro: IPR018317 - InterPro: IPR014729 [H]
Pfam domain/function: PF06508 ExsB [H]
EC number: NA
Molecular weight: Translated: 56641; Mature: 56641
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVECSVSGVLIFGEPDEARIRGIEDKLRSIVMRAEERGRDSWGIVTMSRDGGIKSFKSLG CEEEEECEEEEECCCCHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHH KASETLPKYSRLLDTDTVVAIANNRAEPTTEYVKEKGINDIQPMISEYVVVSHNGTIAND HHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHCCCCHHHHHHHCEEEEECCCCEECC IELEGKYGIRKMSKIDSSILPPLLEKAWDGSLEGLQKILRDEIIGSFALAIIDRRRPGRL EEECCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEE WLAVNFKPLYVMWDRELNALFFSSLDTYLEDPDKPPWETNVVKRIEPYSVIEVSREGGWR EEEEECEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCEEEEEECCCCEE RLSLWRVDSSKPRRVLVVASGGLDSTTSATQLIKQGYDVTLLHFNYGHVAEGPEENAVRR EEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHH IAEFLNVPLLEVNMDFFKIVKHSPLLGDGEINRRREGITGAEFAHEWVPARNLVFIALAV HHHHHCCCEEEECHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHCCCCHHHHHHHHH AIAEAMGYDYVATGVNLEEAGAYPDNEMEFIRLLNQVMPYAVGPNKHVELLMPVGHLVKH HHHHHHCCCEEEECCCHHHCCCCCCCHHHHHHHHHHHCCEECCCCCCEEEEECHHHHHHH EIVKLGLEIGAPLHLTWSCYDKGPKHCGRCGPCFMRRLAFKINGVRDPVEYDLPPEVEEE HHHHHHHHCCCCEEEEEECCCCCHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHH YWRGTKPYRTPLPVGKRELTQH HHCCCCCCCCCCCCCHHHHCCC >Mature Secondary Structure MVECSVSGVLIFGEPDEARIRGIEDKLRSIVMRAEERGRDSWGIVTMSRDGGIKSFKSLG CEEEEECEEEEECCCCHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHH KASETLPKYSRLLDTDTVVAIANNRAEPTTEYVKEKGINDIQPMISEYVVVSHNGTIAND HHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHCCCCHHHHHHHCEEEEECCCCEECC IELEGKYGIRKMSKIDSSILPPLLEKAWDGSLEGLQKILRDEIIGSFALAIIDRRRPGRL EEECCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEE WLAVNFKPLYVMWDRELNALFFSSLDTYLEDPDKPPWETNVVKRIEPYSVIEVSREGGWR EEEEECEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCEEEEEECCCCEE RLSLWRVDSSKPRRVLVVASGGLDSTTSATQLIKQGYDVTLLHFNYGHVAEGPEENAVRR EEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHH IAEFLNVPLLEVNMDFFKIVKHSPLLGDGEINRRREGITGAEFAHEWVPARNLVFIALAV HHHHHCCCEEEECHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHCCCCHHHHHHHHH AIAEAMGYDYVATGVNLEEAGAYPDNEMEFIRLLNQVMPYAVGPNKHVELLMPVGHLVKH HHHHHHCCCEEEECCCHHHCCCCCCCHHHHHHHHHHHCCEECCCCCCEEEEECHHHHHHH EIVKLGLEIGAPLHLTWSCYDKGPKHCGRCGPCFMRRLAFKINGVRDPVEYDLPPEVEEE HHHHHHHHCCCCEEEEEECCCCCHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHH YWRGTKPYRTPLPVGKRELTQH HHCCCCCCCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11427726 [H]