| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041814
Identifier: 159041814
GI number: 159041814
Start: 1319459
End: 1320559
Strand: Reverse
Name: 159041814
Synonym: Cmaq_1249
Alternate gene names: NA
Gene position: 1320559-1319459 (Counterclockwise)
Preceding gene: 159041816
Following gene: 159041813
Centisome position: 63.56
GC content: 40.51
Gene sequence:
>1101_bases ATGCATAGGAACGTTTACTTAATCTTACTCATTAAGGGACTGAGAACCTTCGTCTTCGGTATTGTTAGTGTACTGACACC CATTTACTTAGCCATGTTGGGTTTCCCACCCATTTATGTGGGTGCCTCTTTATTCCTTATGGTTCTCGGCAATGTTCTCT CAAACATATTATTAACCTGGTTTGGTGACGTAATTGGTAGGAGAAGATTATTAATCATCCTTAGTTTATTCATGTTTATT TCAGGCATATTATTGTTCTCATCCTCATTATACCCAGTAATGGCATTAGCACTACTTATAGGTAACATAAGCACCACAGG AACTGAGGCTGGTCCCTTTCAATCAATTGAAACAGGCGTGTTACCTAGGTTTACTGGTGATAGGCTAGGTAGGATCCTAG GTGTTTACAATCTCATTGGTTACTCCGCTTCATCAATTGGCGCCCTTGCGTCATCATTACCAGCCTACCTTGGGAATAAC ATACATGTAATTAGGTCAATGTACCTAATTTATGCCCTTGCTGGTTTAATAATGATTATTGTTTATAACACATTAAGTGG TATTGAGACCACTAGGAGGGATTTAGGGTTGAGGGGGTTAAGTAGGTCTGCGGTCGCTGATATTAGGAATCTATCAATAT TATTCTCAATAGATGCATTCGGCGGTGGGTTGGTGACGCAGTCATTATTATCATACTGGTTCTATATTCGTTATGGCGTA TCCTTGAGGGAATTAGGTGTTGTATTCATGATTGTTAACGTGGTTACAGCATTATCGTTAATTATTGCACCATTAATAGC TGAGAGGATTGGTAATTTAAGAACAATGGTGTATACGCATATAGTATCAAATGTCTTCCTAATATTAGTGCCGTTGGCTG GAACATTCCTGGGAAGCTTCATATTCCTCCTATTGAGGCAGAGTGTCTCTCAAATGGATGTACCGACTCGGCAAGCGTTT ATGGTGCAGATATTTAAGGATGAGGAAAGAGTCGCCGCTAACGCCATAACCAACACTGCAAGGAGCATAAGCACCTTACC TGGATCATTAATAGTTGGTGATAAAAGAGGTGGCAAACTTCGCCTTTTCAAGGCGGGGTAG
Upstream 100 bases:
>100_bases CGGGCCCACTAGAATAAACTAAGCCTAATCTTCATGCATACGTCTCCTTAAATCAAAACCTCAATTAAACTTTAATACTA TCCCACCTAATGATTCGCCA
Downstream 100 bases:
>100_bases AGTTTTTAAGTTTTCTTTTTCATAAATCTCCTAGTGGTATCCGCGTCTGGTTACTCTACTAAAATGTGGAGTGGGGGCCG AAATACCCTCACTATGCCAG
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Transporter Protein; Transporter Facilitator Family; Multidrug Efflux Permease; ABC Transporter Permease Protein; Sugar Transporter Related Protein; Transport Transmembrane Protein
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MHRNVYLILLIKGLRTFVFGIVSVLTPIYLAMLGFPPIYVGASLFLMVLGNVLSNILLTWFGDVIGRRRLLIILSLFMFI SGILLFSSSLYPVMALALLIGNISTTGTEAGPFQSIETGVLPRFTGDRLGRILGVYNLIGYSASSIGALASSLPAYLGNN IHVIRSMYLIYALAGLIMIIVYNTLSGIETTRRDLGLRGLSRSAVADIRNLSILFSIDAFGGGLVTQSLLSYWFYIRYGV SLRELGVVFMIVNVVTALSLIIAPLIAERIGNLRTMVYTHIVSNVFLILVPLAGTFLGSFIFLLLRQSVSQMDVPTRQAF MVQIFKDEERVAANAITNTARSISTLPGSLIVGDKRGGKLRLFKAG
Sequences:
>Translated_366_residues MHRNVYLILLIKGLRTFVFGIVSVLTPIYLAMLGFPPIYVGASLFLMVLGNVLSNILLTWFGDVIGRRRLLIILSLFMFI SGILLFSSSLYPVMALALLIGNISTTGTEAGPFQSIETGVLPRFTGDRLGRILGVYNLIGYSASSIGALASSLPAYLGNN IHVIRSMYLIYALAGLIMIIVYNTLSGIETTRRDLGLRGLSRSAVADIRNLSILFSIDAFGGGLVTQSLLSYWFYIRYGV SLRELGVVFMIVNVVTALSLIIAPLIAERIGNLRTMVYTHIVSNVFLILVPLAGTFLGSFIFLLLRQSVSQMDVPTRQAF MVQIFKDEERVAANAITNTARSISTLPGSLIVGDKRGGKLRLFKAG >Mature_366_residues MHRNVYLILLIKGLRTFVFGIVSVLTPIYLAMLGFPPIYVGASLFLMVLGNVLSNILLTWFGDVIGRRRLLIILSLFMFI SGILLFSSSLYPVMALALLIGNISTTGTEAGPFQSIETGVLPRFTGDRLGRILGVYNLIGYSASSIGALASSLPAYLGNN IHVIRSMYLIYALAGLIMIIVYNTLSGIETTRRDLGLRGLSRSAVADIRNLSILFSIDAFGGGLVTQSLLSYWFYIRYGV SLRELGVVFMIVNVVTALSLIIAPLIAERIGNLRTMVYTHIVSNVFLILVPLAGTFLGSFIFLLLRQSVSQMDVPTRQAF MVQIFKDEERVAANAITNTARSISTLPGSLIVGDKRGGKLRLFKAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6322584, Length=391, Percent_Identity=23.2736572890026, Blast_Score=116, Evalue=5e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39957; Mature: 39957
Theoretical pI: Translated: 10.61; Mature: 10.61
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRNVYLILLIKGLRTFVFGIVSVLTPIYLAMLGFPPIYVGASLFLMVLGNVLSNILLTW CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH FGDVIGRRRLLIILSLFMFISGILLFSSSLYPVMALALLIGNISTTGTEAGPFQSIETGV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCC LPRFTGDRLGRILGVYNLIGYSASSIGALASSLPAYLGNNIHVIRSMYLIYALAGLIMII CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH VYNTLSGIETTRRDLGLRGLSRSAVADIRNLSILFSIDAFGGGLVTQSLLSYWFYIRYGV HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHHCC SLRELGVVFMIVNVVTALSLIIAPLIAERIGNLRTMVYTHIVSNVFLILVPLAGTFLGSF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFLLLRQSVSQMDVPTRQAFMVQIFKDEERVAANAITNTARSISTLPGSLIVGDKRGGKL HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEE RLFKAG EEEECC >Mature Secondary Structure MHRNVYLILLIKGLRTFVFGIVSVLTPIYLAMLGFPPIYVGASLFLMVLGNVLSNILLTW CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH FGDVIGRRRLLIILSLFMFISGILLFSSSLYPVMALALLIGNISTTGTEAGPFQSIETGV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCC LPRFTGDRLGRILGVYNLIGYSASSIGALASSLPAYLGNNIHVIRSMYLIYALAGLIMII CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH VYNTLSGIETTRRDLGLRGLSRSAVADIRNLSILFSIDAFGGGLVTQSLLSYWFYIRYGV HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHHCC SLRELGVVFMIVNVVTALSLIIAPLIAERIGNLRTMVYTHIVSNVFLILVPLAGTFLGSF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFLLLRQSVSQMDVPTRQAFMVQIFKDEERVAANAITNTARSISTLPGSLIVGDKRGGKL HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEE RLFKAG EEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA