Definition Caldivirga maquilingensis IC-167 chromosome, complete genome.
Accession NC_009954
Length 2,077,567

Click here to switch to the map view.

The map label for this gene is uxuA [H]

Identifier: 159041725

GI number: 159041725

Start: 1215421

End: 1216449

Strand: Reverse

Name: uxuA [H]

Synonym: Cmaq_1160

Alternate gene names: 159041725

Gene position: 1216449-1215421 (Counterclockwise)

Preceding gene: 159041726

Following gene: 159041724

Centisome position: 58.55

GC content: 45.68

Gene sequence:

>1029_bases
ATGGGTGTTGGGGATACGGGTGTTAGGCTTAGGATTGCTGAAATAATACTTGATAGTAGTCCGACAGTATTCTGGGATAT
GCTTAGGCAGGTTGGTGTTGAGGAGGCTACTGGTATATTGCCTAGGGCTTACCCTGATTGGAGGCAGTGGAGGGCTTGGG
ATCCCTGGGATTATGCCCCCTTATCTAATTATAAGAGAATGATTGAGGAGGCTGGCTTTAAGCTCACAATTATTGAGGAT
AACCCACCCATGGATAAGTTAATATATGGTTTACCTGGCAAGGAGGAGCAGCTTGATAATGTTGCTAAGCTCATTGAGAA
TATGGGTAAGTTAGGTATATCAACGTGGGTTTATAATTGGATGCCTACTGGTTGGCTTAGGACTAGGACTGCATTAAGGG
GTAGGGGTGGGGCTTATACCTCAGGTTTCTATGAGGAGGATCTTAAGGATTCACCACCACCTAAGTTTGGTAAAGTTGAT
GCATCCACACTATGGAGGACGCTGAAGGATTTCCTTGAATACATTATACCAATAGCTGAAAGCGCTAATGTTAGGTTGGC
TATGCATCCTGATGACCCACCAATACCTGAGGTTGCTGGTACGGCTAGGATAATGAATAGTATTGAGGCATTTGATAAGT
TATTAAGCCTAGTTAAGAGTGAGTACAATGGCATAACAATGTGCCTAGGTAACTTCTCCCTAATGACCAATGACCTACCA
GGGTTAATTAGGCACTTCGTACCAACAGGTAGGGTCTTCTTCGTACACTTCAGGGCTGTTAGGGGTACGGCTAGGGGGTT
TGAGGAGGTTTTCATTGATGAGGCCGGTGAGGAGTTTTACTTAGCGATGAAGGAGTTCGTGAGGCATAAATTCTACGGGC
CGTTTAGGGTTGACCATACACCAACCTTAAGTGGTGATATAGCTCAATTATCAACCCCAGGCTACTCAGCATTAGGTAGA
CTGCATGCAATAGGCTTCCTACAGGGCTTATTCAAGGCAGCGGTGGCTGAGGTTGAGGGGAGCGGCTAG

Upstream 100 bases:

>100_bases
GGCGATTTTAGGTTATTTTACATGGTTAAAAAATATTTTTTATATCATGTAATTGGAAGTATTGTGGGAATGTTTTAAAG
CTACTTGTGGTTAATCCTGT

Downstream 100 bases:

>100_bases
GTTTAATTACGGTAAAGTTTAAATCCCATGAATCAACACCTAGGAGCAAGCGGGGGTGCCCGAGCATGGTCAAAGGGGGC
GGGTTTAGGTCCCGTTGGCG

Product: mannonate dehydratase

Products: NA

Alternate protein names: D-mannonate hydrolase [H]

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MGVGDTGVRLRIAEIILDSSPTVFWDMLRQVGVEEATGILPRAYPDWRQWRAWDPWDYAPLSNYKRMIEEAGFKLTIIED
NPPMDKLIYGLPGKEEQLDNVAKLIENMGKLGISTWVYNWMPTGWLRTRTALRGRGGAYTSGFYEEDLKDSPPPKFGKVD
ASTLWRTLKDFLEYIIPIAESANVRLAMHPDDPPIPEVAGTARIMNSIEAFDKLLSLVKSEYNGITMCLGNFSLMTNDLP
GLIRHFVPTGRVFFVHFRAVRGTARGFEEVFIDEAGEEFYLAMKEFVRHKFYGPFRVDHTPTLSGDIAQLSTPGYSALGR
LHAIGFLQGLFKAAVAEVEGSG

Sequences:

>Translated_342_residues
MGVGDTGVRLRIAEIILDSSPTVFWDMLRQVGVEEATGILPRAYPDWRQWRAWDPWDYAPLSNYKRMIEEAGFKLTIIED
NPPMDKLIYGLPGKEEQLDNVAKLIENMGKLGISTWVYNWMPTGWLRTRTALRGRGGAYTSGFYEEDLKDSPPPKFGKVD
ASTLWRTLKDFLEYIIPIAESANVRLAMHPDDPPIPEVAGTARIMNSIEAFDKLLSLVKSEYNGITMCLGNFSLMTNDLP
GLIRHFVPTGRVFFVHFRAVRGTARGFEEVFIDEAGEEFYLAMKEFVRHKFYGPFRVDHTPTLSGDIAQLSTPGYSALGR
LHAIGFLQGLFKAAVAEVEGSG
>Mature_341_residues
GVGDTGVRLRIAEIILDSSPTVFWDMLRQVGVEEATGILPRAYPDWRQWRAWDPWDYAPLSNYKRMIEEAGFKLTIIEDN
PPMDKLIYGLPGKEEQLDNVAKLIENMGKLGISTWVYNWMPTGWLRTRTALRGRGGAYTSGFYEEDLKDSPPPKFGKVDA
STLWRTLKDFLEYIIPIAESANVRLAMHPDDPPIPEVAGTARIMNSIEAFDKLLSLVKSEYNGITMCLGNFSLMTNDLPG
LIRHFVPTGRVFFVHFRAVRGTARGFEEVFIDEAGEEFYLAMKEFVRHKFYGPFRVDHTPTLSGDIAQLSTPGYSALGRL
HAIGFLQGLFKAAVAEVEGSG

Specific function: Hexuronate conversion to KDG. [C]

COG id: COG1312

COG function: function code G; D-mannonate dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mannonate dehydratase family [H]

Homologues:

Organism=Escherichia coli, GI1790778, Length=218, Percent_Identity=33.0275229357798, Blast_Score=106, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004628
- InterPro:   IPR013022 [H]

Pfam domain/function: PF03786 UxuA [H]

EC number: =4.2.1.8 [H]

Molecular weight: Translated: 38464; Mature: 38332

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVGDTGVRLRIAEIILDSSPTVFWDMLRQVGVEEATGILPRAYPDWRQWRAWDPWDYAP
CCCCCCCHHEEEHHHHHCCCCHHHHHHHHHHCHHHHHCCCCCCCCCHHHCCCCCCCCCCC
LSNYKRMIEEAGFKLTIIEDNPPMDKLIYGLPGKEEQLDNVAKLIENMGKLGISTWVYNW
HHHHHHHHHHCCCEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
MPTGWLRTRTALRGRGGAYTSGFYEEDLKDSPPPKFGKVDASTLWRTLKDFLEYIIPIAE
CCCCHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
SANVRLAMHPDDPPIPEVAGTARIMNSIEAFDKLLSLVKSEYNGITMCLGNFSLMTNDLP
CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHCCHH
GLIRHFVPTGRVFFVHFRAVRGTARGFEEVFIDEAGEEFYLAMKEFVRHKFYGPFRVDHT
HHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEECCCC
PTLSGDIAQLSTPGYSALGRLHAIGFLQGLFKAAVAEVEGSG
CCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GVGDTGVRLRIAEIILDSSPTVFWDMLRQVGVEEATGILPRAYPDWRQWRAWDPWDYAP
CCCCCCHHEEEHHHHHCCCCHHHHHHHHHHCHHHHHCCCCCCCCCHHHCCCCCCCCCCC
LSNYKRMIEEAGFKLTIIEDNPPMDKLIYGLPGKEEQLDNVAKLIENMGKLGISTWVYNW
HHHHHHHHHHCCCEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
MPTGWLRTRTALRGRGGAYTSGFYEEDLKDSPPPKFGKVDASTLWRTLKDFLEYIIPIAE
CCCCHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
SANVRLAMHPDDPPIPEVAGTARIMNSIEAFDKLLSLVKSEYNGITMCLGNFSLMTNDLP
CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHCCHH
GLIRHFVPTGRVFFVHFRAVRGTARGFEEVFIDEAGEEFYLAMKEFVRHKFYGPFRVDHT
HHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEECCCC
PTLSGDIAQLSTPGYSALGRLHAIGFLQGLFKAAVAEVEGSG
CCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA