| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is uxuA [H]
Identifier: 159041725
GI number: 159041725
Start: 1215421
End: 1216449
Strand: Reverse
Name: uxuA [H]
Synonym: Cmaq_1160
Alternate gene names: 159041725
Gene position: 1216449-1215421 (Counterclockwise)
Preceding gene: 159041726
Following gene: 159041724
Centisome position: 58.55
GC content: 45.68
Gene sequence:
>1029_bases ATGGGTGTTGGGGATACGGGTGTTAGGCTTAGGATTGCTGAAATAATACTTGATAGTAGTCCGACAGTATTCTGGGATAT GCTTAGGCAGGTTGGTGTTGAGGAGGCTACTGGTATATTGCCTAGGGCTTACCCTGATTGGAGGCAGTGGAGGGCTTGGG ATCCCTGGGATTATGCCCCCTTATCTAATTATAAGAGAATGATTGAGGAGGCTGGCTTTAAGCTCACAATTATTGAGGAT AACCCACCCATGGATAAGTTAATATATGGTTTACCTGGCAAGGAGGAGCAGCTTGATAATGTTGCTAAGCTCATTGAGAA TATGGGTAAGTTAGGTATATCAACGTGGGTTTATAATTGGATGCCTACTGGTTGGCTTAGGACTAGGACTGCATTAAGGG GTAGGGGTGGGGCTTATACCTCAGGTTTCTATGAGGAGGATCTTAAGGATTCACCACCACCTAAGTTTGGTAAAGTTGAT GCATCCACACTATGGAGGACGCTGAAGGATTTCCTTGAATACATTATACCAATAGCTGAAAGCGCTAATGTTAGGTTGGC TATGCATCCTGATGACCCACCAATACCTGAGGTTGCTGGTACGGCTAGGATAATGAATAGTATTGAGGCATTTGATAAGT TATTAAGCCTAGTTAAGAGTGAGTACAATGGCATAACAATGTGCCTAGGTAACTTCTCCCTAATGACCAATGACCTACCA GGGTTAATTAGGCACTTCGTACCAACAGGTAGGGTCTTCTTCGTACACTTCAGGGCTGTTAGGGGTACGGCTAGGGGGTT TGAGGAGGTTTTCATTGATGAGGCCGGTGAGGAGTTTTACTTAGCGATGAAGGAGTTCGTGAGGCATAAATTCTACGGGC CGTTTAGGGTTGACCATACACCAACCTTAAGTGGTGATATAGCTCAATTATCAACCCCAGGCTACTCAGCATTAGGTAGA CTGCATGCAATAGGCTTCCTACAGGGCTTATTCAAGGCAGCGGTGGCTGAGGTTGAGGGGAGCGGCTAG
Upstream 100 bases:
>100_bases GGCGATTTTAGGTTATTTTACATGGTTAAAAAATATTTTTTATATCATGTAATTGGAAGTATTGTGGGAATGTTTTAAAG CTACTTGTGGTTAATCCTGT
Downstream 100 bases:
>100_bases GTTTAATTACGGTAAAGTTTAAATCCCATGAATCAACACCTAGGAGCAAGCGGGGGTGCCCGAGCATGGTCAAAGGGGGC GGGTTTAGGTCCCGTTGGCG
Product: mannonate dehydratase
Products: NA
Alternate protein names: D-mannonate hydrolase [H]
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MGVGDTGVRLRIAEIILDSSPTVFWDMLRQVGVEEATGILPRAYPDWRQWRAWDPWDYAPLSNYKRMIEEAGFKLTIIED NPPMDKLIYGLPGKEEQLDNVAKLIENMGKLGISTWVYNWMPTGWLRTRTALRGRGGAYTSGFYEEDLKDSPPPKFGKVD ASTLWRTLKDFLEYIIPIAESANVRLAMHPDDPPIPEVAGTARIMNSIEAFDKLLSLVKSEYNGITMCLGNFSLMTNDLP GLIRHFVPTGRVFFVHFRAVRGTARGFEEVFIDEAGEEFYLAMKEFVRHKFYGPFRVDHTPTLSGDIAQLSTPGYSALGR LHAIGFLQGLFKAAVAEVEGSG
Sequences:
>Translated_342_residues MGVGDTGVRLRIAEIILDSSPTVFWDMLRQVGVEEATGILPRAYPDWRQWRAWDPWDYAPLSNYKRMIEEAGFKLTIIED NPPMDKLIYGLPGKEEQLDNVAKLIENMGKLGISTWVYNWMPTGWLRTRTALRGRGGAYTSGFYEEDLKDSPPPKFGKVD ASTLWRTLKDFLEYIIPIAESANVRLAMHPDDPPIPEVAGTARIMNSIEAFDKLLSLVKSEYNGITMCLGNFSLMTNDLP GLIRHFVPTGRVFFVHFRAVRGTARGFEEVFIDEAGEEFYLAMKEFVRHKFYGPFRVDHTPTLSGDIAQLSTPGYSALGR LHAIGFLQGLFKAAVAEVEGSG >Mature_341_residues GVGDTGVRLRIAEIILDSSPTVFWDMLRQVGVEEATGILPRAYPDWRQWRAWDPWDYAPLSNYKRMIEEAGFKLTIIEDN PPMDKLIYGLPGKEEQLDNVAKLIENMGKLGISTWVYNWMPTGWLRTRTALRGRGGAYTSGFYEEDLKDSPPPKFGKVDA STLWRTLKDFLEYIIPIAESANVRLAMHPDDPPIPEVAGTARIMNSIEAFDKLLSLVKSEYNGITMCLGNFSLMTNDLPG LIRHFVPTGRVFFVHFRAVRGTARGFEEVFIDEAGEEFYLAMKEFVRHKFYGPFRVDHTPTLSGDIAQLSTPGYSALGRL HAIGFLQGLFKAAVAEVEGSG
Specific function: Hexuronate conversion to KDG. [C]
COG id: COG1312
COG function: function code G; D-mannonate dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannonate dehydratase family [H]
Homologues:
Organism=Escherichia coli, GI1790778, Length=218, Percent_Identity=33.0275229357798, Blast_Score=106, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004628 - InterPro: IPR013022 [H]
Pfam domain/function: PF03786 UxuA [H]
EC number: =4.2.1.8 [H]
Molecular weight: Translated: 38464; Mature: 38332
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVGDTGVRLRIAEIILDSSPTVFWDMLRQVGVEEATGILPRAYPDWRQWRAWDPWDYAP CCCCCCCHHEEEHHHHHCCCCHHHHHHHHHHCHHHHHCCCCCCCCCHHHCCCCCCCCCCC LSNYKRMIEEAGFKLTIIEDNPPMDKLIYGLPGKEEQLDNVAKLIENMGKLGISTWVYNW HHHHHHHHHHCCCEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC MPTGWLRTRTALRGRGGAYTSGFYEEDLKDSPPPKFGKVDASTLWRTLKDFLEYIIPIAE CCCCHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC SANVRLAMHPDDPPIPEVAGTARIMNSIEAFDKLLSLVKSEYNGITMCLGNFSLMTNDLP CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHCCHH GLIRHFVPTGRVFFVHFRAVRGTARGFEEVFIDEAGEEFYLAMKEFVRHKFYGPFRVDHT HHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEECCCC PTLSGDIAQLSTPGYSALGRLHAIGFLQGLFKAAVAEVEGSG CCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure GVGDTGVRLRIAEIILDSSPTVFWDMLRQVGVEEATGILPRAYPDWRQWRAWDPWDYAP CCCCCCHHEEEHHHHHCCCCHHHHHHHHHHCHHHHHCCCCCCCCCHHHCCCCCCCCCCC LSNYKRMIEEAGFKLTIIEDNPPMDKLIYGLPGKEEQLDNVAKLIENMGKLGISTWVYNW HHHHHHHHHHCCCEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC MPTGWLRTRTALRGRGGAYTSGFYEEDLKDSPPPKFGKVDASTLWRTLKDFLEYIIPIAE CCCCHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC SANVRLAMHPDDPPIPEVAGTARIMNSIEAFDKLLSLVKSEYNGITMCLGNFSLMTNDLP CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHCCHH GLIRHFVPTGRVFFVHFRAVRGTARGFEEVFIDEAGEEFYLAMKEFVRHKFYGPFRVDHT HHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEECCCC PTLSGDIAQLSTPGYSALGRLHAIGFLQGLFKAAVAEVEGSG CCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA